Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi467g00029 ATGGGCTGTGTTCAAGCCAAACCATCACAAGAATCTGATGAAGGTAATTACAGTGGACTAAACAGATTCAAAATGGAAAATGGGTATGTTCCAAGTTCTGATTTTGTTGCTCACAGAAGATCCACTGGTCAGAGTCAAAAACATGTTCTTGACCAGACTAACAACTATGATCATCATCGTGTCTATGAGAAAGAGAAACAACCCAGAAAGCATAAAGTAGTTGTTGATTCTAGTAGTGTTGCTGGAAAAGGAAAGAGAAATGGTGAATTGAAAGATAGTAAGAAGCAGTTGAACAAGTGTTTTGAAGATGAGATGGTTGATGGATGGCCTAAATGGTTAGTTGATAATGTTCCTTCTCATGGGTTGGATGGTTTGGTTCCAAAGAGTGCTGAATCTTACAAAATGATTGATAAGGTAGGACAAGGAACCTACAGCAATGTTTATAAAGCTCTAGATCGAGACACGGGCGATATCGTGGCACTTAAAAAGGTCCGCTTCAATACGTCGGAGCCTGAAAGCATTAAGTTTATGGCAAGAGAAATAGCGATATTACAGAGATTGGATCATCCCAATATAGTGAAACTTAAAGGGTTAGCCACTTCAAGAATGCAGTACAGTATATATCTAGTTTTTGATTTCATGCCAACGGATTTATCAAGAATTATTTCTCGACCTGATGAAAGACTAACCGAACCACAGGTCAAGTGCTATATGCATCAATTGCTTTCAGGTCTTCAGCATTGTCATGATAGAGGAATTCTGCATCGTGATATAAAGGGGTCGAATCTTTTGATAGATAAAACGGGGATGCTTCAGATTGCAGATTTTGGACTTGCTAATTATTATAGTATAAATCAAGACCAACCTCTCACAAACCGGGTTGTGACACTATGGTACCGAGCTCCTGAGTTGTTGTTAGGCTCCACAGATTATGGAGTCGGCATTGATCTATGGAGTGCTGGTTGTCTCCTTGCAGAAATGTTTAGAGGAGTTCCAATCATGCCTGGAAGAACTGAGGTTGAGCAACTTCATAGAATTTTCAGGCTATGCGGCACACCATCACAAGAGTATTGGAAAAAGTTGAAACTTTCTACAACTTTTATACCTCCAAAGTCTTATAGACCAAGTCTGGTAGAATCTTTCAAGGATCTCCCCCCATCATCTTTAGGTCTCTTATGTACACTTCTTGCTTTAGATCCTGCATTTCGTGGCAGCGCATCTAAAGCTCTTAAAAACCCGTTTTTCTTTACAAGCCCATTGGCTTGTGATCTATCTGGTTTACCTGCAATCTACAAAGGAGATGATGAGCATATTCTAGCCAAAGAACAGATCAAGTACATGAACTCTAAAATCAGACGTTCTCGTACATATATGGAGCGTCGCAAGAATTTAGTATCTAATAAGCCAATCGAACATACCGTATCCTCTAAAGGAGTATTGAGTAATAATGCCGAGGCTGAAACTTATGCTCCAAGTGAAGAACCAGGTAGTGCAACAAGTAGTACTTCATCTAGTGTAAACCAAGCTGGAATAGGGGACCATTCACCTCTCTTCCTCTCTCCATTTATGGCTTCTGATCAAAAGAAGCCCCACAAAATCCACAGTCATGCTAATATTGGTGAAAAAAACACCAAGAACCTTCCTCCATTATCCAAGTCAAAACCAAATGCAACCAAGAGAGATGATAGCAGATACAGATCAGACCAGATTTTCAGGTCCACTTCCACCAGAGAATTTAGAAAGTTAAAACCAGATCAACATTTACTCTTTGATTAG 1776 0.3964 MGCVQAKPSQESDEGNYSGLNRFKMENGYVPSSDFVAHRRSTGQSQKHVLDQTNNYDHHRVYEKEKQPRKHKVVVDSSSVAGKGKRNGELKDSKKQLNKCFEDEMVDGWPKWLVDNVPSHGLDGLVPKSAESYKMIDKVGQGTYSNVYKALDRDTGDIVALKKVRFNTSEPESIKFMAREIAILQRLDHPNIVKLKGLATSRMQYSIYLVFDFMPTDLSRIISRPDERLTEPQVKCYMHQLLSGLQHCHDRGILHRDIKGSNLLIDKTGMLQIADFGLANYYSINQDQPLTNRVVTLWYRAPELLLGSTDYGVGIDLWSAGCLLAEMFRGVPIMPGRTEVEQLHRIFRLCGTPSQEYWKKLKLSTTFIPPKSYRPSLVESFKDLPPSSLGLLCTLLALDPAFRGSASKALKNPFFFTSPLACDLSGLPAIYKGDDEHILAKEQIKYMNSKIRRSRTYMERRKNLVSNKPIEHTVSSKGVLSNNAEAETYAPSEEPGSATSSTSSSVNQAGIGDHSPLFLSPFMASDQKKPHKIHSHANIGEKNTKNLPPLSKSKPNATKRDDSRYRSDQIFRSTSTREFRKLKPDQHLLFD 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi467g00029 591 MobiDBLite consensus disorder prediction 526 578 - -
Vivi467g00029 591 SMART serkin_6 133 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi467g00029 591 ProSitePatterns Serine/Threonine protein kinases active-site signature. 253 265 IPR008271 GO:0004672|GO:0006468
Vivi467g00029 591 MobiDBLite consensus disorder prediction 468 510 - -
Vivi467g00029 591 MobiDBLite consensus disorder prediction 1 23 - -
Vivi467g00029 591 ProSiteProfiles Protein kinase domain profile. 133 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi467g00029 591 ProSitePatterns Protein kinases ATP-binding region signature. 139 162 IPR017441 GO:0005524
Vivi467g00029 591 FunFam probable serine/threonine-protein kinase At1g54610 120 215 - -
Vivi467g00029 591 Gene3D Phosphorylase Kinase; domain 1 125 215 - -
Vivi467g00029 591 MobiDBLite consensus disorder prediction 555 578 - -
Vivi467g00029 591 SUPERFAMILY Protein kinase-like (PK-like) 128 419 IPR011009 -
Vivi467g00029 591 MobiDBLite consensus disorder prediction 462 510 - -
Vivi467g00029 591 Pfam Protein kinase domain 133 415 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi467g00029 591 PANTHER CELL DIVISION PROTEIN KINASE 131 420 - -
Vivi467g00029 591 FunFam Putative serine/threonine-protein kinase 216 453 - -
Vivi467g00029 591 Gene3D Transferase(Phosphotransferase) domain 1 216 429 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi467g00029 128 473 Core Cell Cycle Gene Families AT5G10270 42.857 6.24e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Vivi467g00029 Pkinase 1.9e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi467g00029 K08819 - gmx:100776854 839.721