Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi467g00010 ATGTTTAAAATGCCTCCTCAAAAGGATCCAGATAAGTTCTTCATGTCTATCAGTAATGGAGAGAATAAGCATGTCGACTATTTACGCGCTTTATATGAGGGTTGCATTGCTGGAGGTGTTGCTGGTGTTGCTGTAGAGGCAGCTTTATACCCCATTGATACCATCAAAACACGCCTACAGGTTGCTCGTGGTGGACTAAAAATTGATTTCAAAGGTTTGTATTCTGGATTGGCTGTAAACCTTGCTGGTTCCTTACCAGCTTCTGCAATTTTTATTGGTGTGTATGAACCAGCAAAGCAGAAATTGCTGCAGATCTTCCCTGAGAATCTAAATGCTCTAGCTCATATTGCTGCAGGTACTATTGCAGGAGCCGCTTCTTCGCTTGTTCGTGTTCCAACTGAGGTTGTTAAGCAAAGGATACAAACCGGTCAGTTCAAATCAACCTCGTCTGCTCTCCGTCTTATCATTGCTAACGAGGGTTTTAAAGGTCTTTTTGCGGGATATAGATCTTTCTTATTGCGAGATTTACCGTTTGATGCGTTAGAATTATGCATCTACGAACAGCTCCGTATCGGGTATAAAGTAGCGGCAAAAAGAGATCTGAATGATCCAGAGAATGCTATGATTGGGGCCTTTGCTGCTGCAATAACTGGAGCAGTTACAACTCCACTTGATGTAATAAAAACCAGATTGATGGTTCAGGGAACACAAAAACATTACAAAGGCATTTGTGATTGTGTTAGGACAATAGTTAAAGAAGAAGGACCTAATGCTCTTTTTAAGGGTATGGGGCCAAGAGTGCTGTGGATAGGAATAGGGGGTTCGATATTTTTTGGTGTTCTTGAGAAGACAAAGAAAACTCTTGCTCAGAGGAACCCTCAAACTGATGCTGAGAAGTGA 900 0.4178 MFKMPPQKDPDKFFMSISNGENKHVDYLRALYEGCIAGGVAGVAVEAALYPIDTIKTRLQVARGGLKIDFKGLYSGLAVNLAGSLPASAIFIGVYEPAKQKLLQIFPENLNALAHIAAGTIAGAASSLVRVPTEVVKQRIQTGQFKSTSSALRLIIANEGFKGLFAGYRSFLLRDLPFDALELCIYEQLRIGYKVAAKRDLNDPENAMIGAFAAAITGAVTTPLDVIKTRLMVQGTQKHYKGICDCVRTIVKEEGPNALFKGMGPRVLWIGIGGSIFFGVLEKTKKTLAQRNPQTDAEK 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi467g00010 299 ProSiteProfiles Solute carrier (Solcar) repeat profile. 110 192 IPR018108 -
Vivi467g00010 299 Pfam Mitochondrial carrier protein 110 190 IPR018108 -
Vivi467g00010 299 Pfam Mitochondrial carrier protein 205 291 IPR018108 -
Vivi467g00010 299 Pfam Mitochondrial carrier protein 33 64 IPR018108 -
Vivi467g00010 299 PRINTS Mitochondrial carrier protein signature 216 234 IPR002067 GO:0055085
Vivi467g00010 299 PRINTS Mitochondrial carrier protein signature 128 142 IPR002067 GO:0055085
Vivi467g00010 299 PRINTS Mitochondrial carrier protein signature 167 187 IPR002067 GO:0055085
Vivi467g00010 299 PRINTS Mitochondrial carrier protein signature 115 128 IPR002067 GO:0055085
Vivi467g00010 299 PRINTS Mitochondrial carrier protein signature 260 278 IPR002067 GO:0055085
Vivi467g00010 299 ProSiteProfiles Solute carrier (Solcar) repeat profile. 29 101 IPR018108 -
Vivi467g00010 299 SUPERFAMILY Mitochondrial carrier 33 282 IPR023395 -
Vivi467g00010 299 ProSiteProfiles Solute carrier (Solcar) repeat profile. 205 287 IPR018108 -
Vivi467g00010 299 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 33 299 - -
Vivi467g00010 299 Gene3D Mitochondrial carrier domain 32 298 IPR023395 -
Vivi467g00010 299 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 31 296 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi467g00010 104 293 Chloroplast and Mitochondria Gene Families AT1G07030 30.964 5.80e-17 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi467g00010 K15111 - gmx:100800051 428.713