Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi467g00008 ATGCCGGAATTAGACAGAGGAACATCAACGGAGTTGCCGGTGACACCGGACACACCGGGAGGACCATTATTTTCGTCGGTGAGAATTGATTCTCCTGGACGTGATTCTTTTGCAATGCCGAGGTGCAACATGTGCATGCCCAAAAATATGGGTGTTCGAATTCCGAGTGTTTCTCTAACTCAGAAGATTGGAGCAGAGTTTGTAGGAACATTCATTCTGATATATGTAGCAACAGCAGGACCAATAGTGAACAACAAATACGAAGGTGTAGAGACACTTATAGGAAATGCAGCCTGTGCTGGTTTAACAGTCATGGCAATTATTTTCTCAATTGGTCATATCTCAGGCGCACATCTCAATCCAGCACTCACCATTGCGTTTGCAGCGTTTCGCCATTTTCCATGGGCACATGTTCCTGCTTACATTGCAGCACAAGTCTCTGCATCGATCTGCGCTGCTTTTGCTCTCAAAACTATTTATCGTCCTTTCCTCTCTGGTGGTGTTACTCTCCCTACCGTTAGCGTTGGACAAGCTTTTGCAACCGAGTTTATCATCACTTTTATTCTCTTGTTTGTTGCAACTGCTGTTGCTACGGATACTCGCGCTGTTGGTGAAATGGCTGGTATTGCGGTTGGAGCTACAGTTATAGTCAACATTCTGATCTCAGGGCCAACAAGTAGTGGTTCAATGAACCCGGTTCGCACCTTAGGTCCAGCCATTGCAGCAGGAAACTACAAAAATATCTGGATATATTTCGTGGCGCCGACGCTTGGTGCGCTTGCTGGTTCTGGAGCTTATACGCTTGTCAAGCTGCGTGAAGAAGACAACAACGAAGCTGAACAGCAGCCGCTACCGGTTAGGAGCTACAGTCACTAG 876 0.4669 MPELDRGTSTELPVTPDTPGGPLFSSVRIDSPGRDSFAMPRCNMCMPKNMGVRIPSVSLTQKIGAEFVGTFILIYVATAGPIVNNKYEGVETLIGNAACAGLTVMAIIFSIGHISGAHLNPALTIAFAAFRHFPWAHVPAYIAAQVSASICAAFALKTIYRPFLSGGVTLPTVSVGQAFATEFIITFILLFVATAVATDTRAVGEMAGIAVGATVIVNILISGPTSSGSMNPVRTLGPAIAAGNYKNIWIYFVAPTLGALAGSGAYTLVKLREEDNNEAEQQPLPVRSYSH 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi467g00008 291 PANTHER AQUAPORIN NIP2-1 48 274 IPR034294 -
Vivi467g00008 291 FunFam Aquaporin NIP2-1 51 281 - -
Vivi467g00008 291 PRINTS Major intrinsic protein family signature 212 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00008 291 PRINTS Major intrinsic protein family signature 61 80 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00008 291 PRINTS Major intrinsic protein family signature 181 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00008 291 PRINTS Major intrinsic protein family signature 100 124 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00008 291 PRINTS Major intrinsic protein family signature 137 156 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00008 291 PRINTS Major intrinsic protein family signature 249 269 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00008 291 Pfam Major intrinsic protein 56 266 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00008 291 ProSitePatterns MIP family signature. 118 126 IPR022357 -
Vivi467g00008 291 Gene3D Glycerol uptake facilitator protein. 48 283 IPR023271 -
Vivi467g00008 291 MobiDBLite consensus disorder prediction 1 25 - -
Vivi467g00008 291 SUPERFAMILY Aquaporin-like 56 278 IPR023271 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi467g00008 23 289 Major Intrinsic Protein MIP AT4G10380 67.500 6.10e-129 367
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi467g00008 K09874 - gmx:100804356 439.113