Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi467g00007 ATGGGATACATTAAAATCGGAATGGATTCTCCAAATTTTGGGTTTAGACCCGACCTAAATTTCTTATTATATACACGGTCCATCAAATATGAGATTGGAGCAGAGTTTGTAGGAACATTCATACTGATATATGCAGCAACAGCAGGACCAATAGTGAACAACAAATACGCTGGAGCAGAAACACTTATGGGAAATGCAGCTTGTGCTGGTTTAACAGTCATGTTCATTATTCTCTCAATCGGTCATATCTCAGGTGCACATCTCAATCCATCCCTCACCATTGCGTTCGCGGCGTTTCGCCATTTTCCATGGGCACATGTTCCGGCCTACATTGCAGCACAAGTCTCTGCATCGATCTGCGCTTGTTATGCTCTCAAAGTTGTTTATCACCCTTTCCTTTCTGGTGGTGTAACTGTCCCTACTGTTAGCATTGGACAAGCTTTTGCATCTGAGTTTATCATCACCTTTATTCTCTTGTTCGTTGTCACTGCTGTTGCTACTGATACTCGCGCGGTTGGTGAATTGGCTGGTATTGCTGTTGGAGCTACAGTTTTGCTCAACATTCTCATTACAGGGCCAACAAGTGGAGGCTCGATGAACCCGGTGCGCACCTTAGGTCCAGCAGTTGCAGCAGGAAACTACAAGCATATCTGGATATATTTGGTGGCGCCGACGCTTGGTGCGCTTGCTGGTTCTGGAGTTTATACGCTTGTCAAGCTGCGTGACGATGAAGCTGAACCGGTGCAACCGGTTAGAAGCTTCCGTCGCTAG 771 0.4604 MGYIKIGMDSPNFGFRPDLNFLLYTRSIKYEIGAEFVGTFILIYAATAGPIVNNKYAGAETLMGNAACAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWAHVPAYIAAQVSASICACYALKVVYHPFLSGGVTVPTVSIGQAFASEFIITFILLFVVTAVATDTRAVGELAGIAVGATVLLNILITGPTSGGSMNPVRTLGPAVAAGNYKHIWIYLVAPTLGALAGSGVYTLVKLRDDEAEPVQPVRSFRR 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi467g00007 256 PRINTS Major intrinsic protein family signature 150 168 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00007 256 PRINTS Major intrinsic protein family signature 181 203 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00007 256 PRINTS Major intrinsic protein family signature 106 125 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00007 256 PRINTS Major intrinsic protein family signature 69 93 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00007 256 PRINTS Major intrinsic protein family signature 30 49 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00007 256 PRINTS Major intrinsic protein family signature 218 238 IPR000425 GO:0015267|GO:0016020|GO:0055085
Vivi467g00007 256 ProSitePatterns MIP family signature. 87 95 IPR022357 -
Vivi467g00007 256 PANTHER AQUAPORIN NIP2-1 31 244 IPR034294 -
Vivi467g00007 256 Gene3D Glycerol uptake facilitator protein. 23 249 IPR023271 -
Vivi467g00007 256 FunFam Aquaporin NIP2-1 20 249 - -
Vivi467g00007 256 SUPERFAMILY Aquaporin-like 23 244 IPR023271 -
Vivi467g00007 256 Pfam Major intrinsic protein 30 235 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi467g00007 27 256 Major Intrinsic Protein MIP AT4G10380 80.435 8.44e-134 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi467g00007 K09874 - gmx:100804356 418.313