Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi464g00029 ATGTGCTCTGCCACTGCTGCAACACCCTTGTTTTCCACGGATCACCACCTTCCCAAATCCTTCACTCGCCTCTGCAAACCCTTCCATTCTAGGGTTCCCACTTCCTTAACCTTCCATTCATCACCACCTACCTTCTTTGTCAGAGCTACCGTTGTGAAGTGGCGAAGTCCAAAGCAAACTCTACCTCCCAACAGCGACACGGGTTTCCAAAAAAAGGCCCTATATCTAGAATCTATCGGTATCGACCCTTTCTCACTCCTTGAAAGTCATCCGATGCTGATCACTGCCTCACTCAACGATATAAAATCAACCGTGGAATACATCACCGCAATGGATTTCTCTGCAATCGAGTTTAGTCGAATGGTTGGCATGTGCCCTGCGATCCTAACCACGAAAGTCTCCGACATTATACCCGTCTTCACGTTCCTCCACCGCGAAGTTCGTGTAAGTAGCTCAAAAATCAAGCACGTAATAAATCGCCGTCCTCGGTTAATCATCTGCAACGTCGACAAACAGCTCCGTCCAACCATGTACTTCCTCCAAAGCATCGGCATAGAAGAGGTAAACAAGCACACCGACTTGCTCTCATGCAGCGTCGAAGACAAGTTCATGCCACGAATCGAATACTTCGAGAACATCGGATTCTCTCGCCGCGACGTAACTTCGATGTTCCGACGATTTCCTCAACTGTTTTGTTGTAGTATTAAGAACAGTTACGAGCCGAAATACAATTACTTTGTGGTGGAGATGGGGAGAGATTTGAAGGAGGTGAAAGAGTTTCCACAATTTTTCTCATATAGCTTAGAGAATAGGATTAAGCCTAGACATAAAAGGTGTGTAGAAATGGGAGTGTGTTTTCCTCTTCCTTTGTTGTTAAAGAGTAGTGAAGTGAAATTTCAGAATAGATTAGAAGCTTTTGTAAATTCTTCAACACCATTGGAAACTTCTCCTCTGTGGTGTGCTGGTCTTCATAATTATTGA 981 0.4465 MCSATAATPLFSTDHHLPKSFTRLCKPFHSRVPTSLTFHSSPPTFFVRATVVKWRSPKQTLPPNSDTGFQKKALYLESIGIDPFSLLESHPMLITASLNDIKSTVEYITAMDFSAIEFSRMVGMCPAILTTKVSDIIPVFTFLHREVRVSSSKIKHVINRRPRLIICNVDKQLRPTMYFLQSIGIEEVNKHTDLLSCSVEDKFMPRIEYFENIGFSRRDVTSMFRRFPQLFCCSIKNSYEPKYNYFVVEMGRDLKEVKEFPQFFSYSLENRIKPRHKRCVEMGVCFPLPLLLKSSEVKFQNRLEAFVNSSTPLETSPLWCAGLHNY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi464g00029 326 Pfam mTERF 189 300 IPR003690 GO:0003690|GO:0006355
Vivi464g00029 326 Pfam mTERF 68 153 IPR003690 GO:0003690|GO:0006355
Vivi464g00029 326 SMART mt_12 254 285 IPR003690 GO:0003690|GO:0006355
Vivi464g00029 326 SMART mt_12 119 150 IPR003690 GO:0003690|GO:0006355
Vivi464g00029 326 SMART mt_12 187 216 IPR003690 GO:0003690|GO:0006355
Vivi464g00029 326 SMART mt_12 155 186 IPR003690 GO:0003690|GO:0006355
Vivi464g00029 326 SMART mt_12 221 253 IPR003690 GO:0003690|GO:0006355
Vivi464g00029 326 SMART mt_12 84 114 IPR003690 GO:0003690|GO:0006355
Vivi464g00029 326 FunFam Transcription termination factor MTEF1, chloroplastic 143 307 - -
Vivi464g00029 326 Gene3D Transcription termination factor 3, mitochondrial 132 308 IPR038538 -
Vivi464g00029 326 PANTHER CGI-12 PROTEIN-RELATED 85 308 IPR003690 GO:0003690|GO:0006355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi464g00029 mTERF 4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi464g00029 K15031 - gmx:100804440 521.931