Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi464g00023 ATGGCTTCGTCCCTTTTGACAAAGATTCTTTTATCTCCTCGCTCGATTCACACCTCCTCCTTATTCACTCACCACCCACCAATTCTCTCTTCTCTCTTCAATAAGCAGCTGTCCTCTTTACGAGGTGTTTCAACCTTTACAGCCCAAAATACTAAGTTGACTAGTTGGGCTCCTTGTATGGCTTCTTCAGTAGTTAGTAGAAGAGCTACATATTCGACGCGATCTGCACCTACGAATGAGCCAGTTGTTTCTGTAGATTGGCTTTACGAAAACTTGAAGGAGCCTGATATTAAGGTGGTGGATGCATCCTGGTACATGCCGGATGAGCAAAGGAATCCGATTCAAGAGTATCAGGTTGCTCACATTCCCGGGGCCCTTTTCTTTGACATAGATGGAATCGCAGACCGCACTACAAATTTGCCGCACATGTTACCTTCAGAGAAAGCTTTTGCCGCTGCTGTTTCTGCTCTTGGCATACATAACAAAGACGACCTAGTTGTTTATGACGGAAAAGGACTATTTAGTGCAGCCCGTGTTTGGTGGATGTTCCGAGTGTTTGGGCATGACAGAGTTTGGGTATTAGACGGTGGCCTACCAAGATGGCGTGCATCTGGTTACGATGTTGAATCTAGTGCTTCGAGTGATGCTATTCTTAAAGCCAGTGCTGCAAGTGAGGCGATAGAGAAAGTATCTCAAGGACAAGCAGTTGGTCCAATCACATTTGAGACTAAATTTCAGCCACATCTTGTTTGGACCCTTGAACAGGTAACGAAAAATATTGAGGAAAAATCTCACCAACAGGTAGATGCTCGATCAAAGCCTAGGTTTGACGGAATTGCACCAGAGCCCAGAAAGGGAATCAGAAGTGGTCACGTACCTGGCAGCAAATGCATTCCTTTTCCCCAGATTTTAGATAGTTCACAAGCATTGTTACCAGCAGGCGAGCTTAAGAAGCGATTTGAACAAGAAGGCATCTCTTTGGAAAAGCCAGTCGTGACTTCGTGTGGAACCGGAGTAACTGCATGCATTCTTGCATTGGGTCTTCATCGTCTTGGAAAGACCGATGTTCCGGTTTACGATGGATCATGGACCGAATGGGGATCACATCCTGATACTCCTGTCGACACCGCCGCACAAACGCAATAG 1146 0.459 MASSLLTKILLSPRSIHTSSLFTHHPPILSSLFNKQLSSLRGVSTFTAQNTKLTSWAPCMASSVVSRRATYSTRSAPTNEPVVSVDWLYENLKEPDIKVVDASWYMPDEQRNPIQEYQVAHIPGALFFDIDGIADRTTNLPHMLPSEKAFAAAVSALGIHNKDDLVVYDGKGLFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGYDVESSASSDAILKASAASEAIEKVSQGQAVGPITFETKFQPHLVWTLEQVTKNIEEKSHQQVDARSKPRFDGIAPEPRKGIRSGHVPGSKCIPFPQILDSSQALLPAGELKKRFEQEGISLEKPVVTSCGTGVTACILALGLHRLGKTDVPVYDGSWTEWGSHPDTPVDTAAQTQ 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi464g00023 381 MobiDBLite consensus disorder prediction 262 293 - -
Vivi464g00023 381 CDD TST_Repeat_1 82 205 - -
Vivi464g00023 381 Gene3D - 246 372 IPR036873 -
Vivi464g00023 381 FunFam Sulfurtransferase 246 377 - -
Vivi464g00023 381 SMART rhod_4 83 207 IPR001763 -
Vivi464g00023 381 SMART rhod_4 251 372 IPR001763 -
Vivi464g00023 381 PANTHER THIOSULFATE SULFERTANSFERASE 76 378 IPR045078 GO:0016783
Vivi464g00023 381 ProSiteProfiles Rhodanese domain profile. 93 210 IPR001763 -
Vivi464g00023 381 MobiDBLite consensus disorder prediction 262 284 - -
Vivi464g00023 381 Pfam Rhodanese-like domain 253 368 IPR001763 -
Vivi464g00023 381 Pfam Rhodanese-like domain 84 203 IPR001763 -
Vivi464g00023 381 FunFam Sulfurtransferase 75 217 - -
Vivi464g00023 381 ProSitePatterns Rhodanese C-terminal signature. 356 366 IPR001307 GO:0004792
Vivi464g00023 381 Gene3D - 75 217 IPR036873 -
Vivi464g00023 381 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 79 212 IPR036873 -
Vivi464g00023 381 CDD TST_Repeat_2 252 368 - -
Vivi464g00023 381 ProSiteProfiles Rhodanese domain profile. 261 375 IPR001763 -
Vivi464g00023 381 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 254 377 IPR036873 -
Vivi464g00023 381 ProSitePatterns Rhodanese signature 1. 117 128 IPR001307 GO:0004792
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi464g00023 60 376 Sulfurtransferasese or Rhodanese AT1G79230 77.603 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi464g00023 K01011 - gmx:100798053 641.343