Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi464g00021 ATGGGATTTCTCACTTCACACTACAACAACAACTATAATAACTCTTACCCTTCTCATCAATCTCTTCAAACCTTCGACAACTCCGAAACCATCACTTTCCAACATCATCATGAACATCAACAACAACAACACCAACAAAACTATGACTTTTCGTCTTCCTTTCTAGATGAAACCTTGTTTTTTCCGAGTCCTTGTAATTTTTACACAAACGAGGATAATAATTATTATTATCCTTGTGAAGATCAACTAATCATTGACTCAACTTTCTCTTGTGATCAAAACGATGGTTTCGTTTCAATGAACGACATTTTCCCAAACGAGGAAAATCTCAACAACTATGTTAACAATCTTCCATGTCCGAAACGACAGAAGCTAGGTTATGAAGAAACATTAACAAACCATCAACAACAACAGGAGCTTTTGAACTCAGCCAATTATTTTGTGGATGAGTTTATAGCGAACCCTTTTAGTACTACTACTTTATTCGAACCGGAAGCGGAACCGGAAGCGTTTTTGTGTTCGAATGTGGTTGATGTTGTGCAATGTGAGAAGAAGGTTGGCGGCGAAAGGACTATTTCGACGCAGAGTATTGCGGCGAGGGAGAGGAGGAGAAAGATAACTGAGAAGACGCAAGAGCTTGGGAAGTTGGTTCCTGGTGGACCTAAGATGAATACTGCTGAGATGCTTAGTGCTGCTGCTAATTATGTTAGGTTTCTTCAAGCTCAAGTTGGAATGCTTCAAGTTATGGAAACTTTTAGCAAGGAAGAAAAGGAACCTCCTCCTCCTCCAAGTGAAGATCTACACAAGCTAGTTGTTTCTCCTTTTGTTCAAGAGAAGTTGTATTCGGAAGAAAAGTGCTTTATTTCAAAAGGGATTATCACCACATTGGCCAACAATGTTGAGGTTAGGTCAAAACCTTCAATCCTTCAAGGTCTTAAGCAACTTGTTGGAGCAGAGATTGATGATGAGGATGAGAAGAAACCAAAACAAGAATAA 996 0.3916 MGFLTSHYNNNYNNSYPSHQSLQTFDNSETITFQHHHEHQQQQHQQNYDFSSSFLDETLFFPSPCNFYTNEDNNYYYPCEDQLIIDSTFSCDQNDGFVSMNDIFPNEENLNNYVNNLPCPKRQKLGYEETLTNHQQQQELLNSANYFVDEFIANPFSTTTLFEPEAEPEAFLCSNVVDVVQCEKKVGGERTISTQSIAARERRRKITEKTQELGKLVPGGPKMNTAEMLSAAANYVRFLQAQVGMLQVMETFSKEEKEPPPPPSEDLHKLVVSPFVQEKLYSEEKCFISKGIITTLANNVEVRSKPSILQGLKQLVGAEIDDEDEKKPKQE 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi464g00021 331 Gene3D - 190 258 IPR036638 GO:0046983
Vivi464g00021 331 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 190 239 IPR011598 GO:0046983
Vivi464g00021 331 Pfam Helix-loop-helix DNA-binding domain 196 240 IPR011598 GO:0046983
Vivi464g00021 331 SMART finulus 196 245 IPR011598 GO:0046983
Vivi464g00021 331 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 190 251 IPR036638 GO:0046983
Vivi464g00021 331 CDD bHLH_AtbHLH_like 195 247 IPR045239 -
Vivi464g00021 331 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 15 289 IPR045843 GO:0003700|GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi464g00021 47 320 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G30670 30.935 4.32e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Vivi464g00021 HLH 6.4e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi464g00021 - - psat:127131095 429.869