Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi464g00012 ATGCAGAAACATCCATACAATTCAATGGAGCCTCGAAAGGAGGAATTCCATTCTGCACCGCAACCGGGTTTGCAGGACCATCTGGACGGCATGCATGCCAATACAAGGCCTTCTCCTTCCTTCAACGTGTCGGAGAATAAACCTGTACATAATTTCTCCATACAGACGGGTGAGGAGTTTGCTCTTGAGTTCATGAGGGACAGGGTGAATGTGAATCTCAAGAAGCCTTCGTTTCCGAATGTTGTCGGAGATCCTAATTACTCGACAGGGTATATGGAATTTAAAGGCCTTTTAGGCCATAAAGGATCAGAGAGTGGTTCCGATGTTTCTATGCTTGCAAGTATTGAAAAAGGTCCGAAAGAGTTTGACAGAAGGAGTTCTGTTTTACATCAGGAAAGAAGTAATTATGGCTCAGGTCGATCGATTCCTAGAACATCGTCTACTAATCAAGATAACAACCGAGTCCTGCACGGTATTTCTTCTTCCGGATCTTCTGACAGCTTATCAAGGATGAAGATTCTATGCAGTTTTGGTGGTAGAATATTACCGCGGCCAAGTGACGGAAAACTTAGATATGTCGGGGGCGAAACACGGATCATTAGCATTAGAAAGGACATAAATTGGCCGGAGCTTATGCAGAAAATATCATCAATCTATAATGAGACTCGAGTAATAAAGTATCAGCTCCCCGGAGAAGATCTCGACGCCCTCGTTTCAGTAACGTCTGATGAGGATCTACGGAATATGATGGAGGAATGTCATGATCTACAAAGAAGGAGAGGATCGTTAAAGCTTCGGATGTTCCTATTCTCGATAAATGATTTGGATGATAGTCAGTTTGGTCTCGGTAGCATGGATGGTGGTGATTCCGAAGTCCAGTATGTAGTTGCTATTAATGGCATGAACATGGAATCGAGAAGCAACTCGATTCTTCGTTGTGCCGGAAGTTCTAATGATATACAGGAATTAGACCGACAAACTCTTGACAAGGAAACTAAAAGAGCTGTGGTTGAATCGTATGGTGTCGGCAGTTCTTCCTTGACTGGAAATGTTAACCCGGTATTGACAAATCAGTCTTCGCAACCAGTGCTACCAACATCCTCAAATGCTTATGAAGCCTATCCGTTCTTTTACGAGGATCCGATCATTCAACAAGGGGGAACTAGTCAATATCCAATACATAATGGCCCTTTTCCTTCTAACAGTTCGGCTCGCAATCTAGCAGACGCTCCGGTTTCTTTGCCTACTTTCGGTGTTGCGAACCAAGGAATCACGAGCGAAGGACAAGCAATGGCATCCGGTGAGTTGCATGTACAAAGTTCTCTTCCTTCGCGTCCATTTGAAGGAGGCTTGCAAGGTAATTTATCCGAGGCGTCAGTTCCAGCGGCTGTATCAGAAGCACTTCATCCTGCAATGCCATTAGAAAACAAGATTTCAGCTGCTGAAACGGAAGTGCTGAATCCTACACAGATTTCAAGATCTGGTGAAGATGACTTCTATCCTGCGTCCACAGACGCATTCAGTCGTGCTCTTGTTGATGCTGAGTCCAATATAATCGATTTCAGTTGCCTTGAACCGCCTCCACTTCCTAATAGAGTGTATTATTCAGAGAGAATTATTCCCAGGGAGCATGCAGATTTGTTGAACCGGTCTGCAAAGTCAGACGATGCATATGGTTCGCACTTACTCATGGCAGATTTACTTTCTGATTTGAACCGTATGAACTCAGTTAGCGAAACCAGTGACATGTTTCACAATGAGAATCTGTCGAATCTGAACACGGTGTCGAACTCATCGGCAAAGCCCGTGCGTGCAGATGGCCATGCCATCAGCAACAAACACTTGCCTGATGCAACAAGTCAGGTGAACCCAAAGTTATATCAGCTTGCGGATTCAGATTCGAAGCCGGTATTGTCAGATAACAAAATCTCCGAAAATGAGACAAATACCTCGAAAGATAGCCATAAAATTCTCCCAGTTGATGAAACCAAGGGCACTGAGAATCTTGCTTTTCGCCGGGTTCCTTCTGTTGAACATAACGAGAATCTAGCATCAAAACTTCAAGACCAAAATTTGTCTGAGGCTCCTACAAGGGAACCTCTTGATGCTAAATCCAAACCTTCTCAGGGTGACATTCTGATTGATATCGAAGACAGGTTTCCCCGAGATTTCCTTTATGATATGTTCTCGAAAGCAGTTCATTCTGAAGATTCCGCAAACATTAGTCCATTGCCAGCTGATAGAGCAGGTTTGAGCTTGAAAATGGACAATCACGAGCCTAAAAGTTGGTCATATTTTCAGAAGTTGGCACATGAAGGGTTTGATAACGTTTCTCTAATTGATCAGGACAATATCGGGTTTTCATCGGCTGTAAGCAAAGTAAAAGAAGGAGATAGTAAGTTCAATATTTCCGCTCCTCCACCAGCAGACGTTATTGTTTTGACAGGACCCAAGGAATCTCATTCCAACATAAATTTTGGACAGGAAAATCAGAATTCCTTACCTGTAATTACTAAAAGCGAGGCTATTGTATTTCAACCAGAAAACAACCATTCCGAACTTAAGGCAAATGAAAATAAGAACATCAACGCCGCCCCAGTGGAAAACATTCGGCCACAAGACTCTGAATATCAGGATGGCAATAATGAGGCAAGAGATGTGGCTGTAGCTCCTCAAGATATTAGTTTTGACGATTTTGACATTAGTACTTTGCAGATCATAATGAATGCGGATCTTGAAGAGCTGAGAGAACTCGGTTCTGGCACTTTTGGGACTGTGTATCATGGAAAGTGGAGGGGATCAGATGTTGCAATTAAAAGAATAAAGAAAAGTTGTTTCTCCGGCCGGTCTTCAGAACAAGAAAGACTGACGATAGAGTTCTGGCGAGAAGCTGACATACTTTCTAAGCTTCATCATCCAAATGTGGTGGCATTTTATGGCGTGGTGCAAGATGGACCAGGAGGAACAATGGCGACTGTTACGGAGTTCATGGTGGATGGTTCTCTACGACATGTTTTGCTACGAAAAGATAGGTACCTTGATCGTCGCAAGAGGCTAATAATTGCCATGGATGCAGCATTTGGAATGGAATACTTACATGCAAAAAATATTGTTCATTTTGACTTGAAATGTGACAATTTGCTTGTGAACTTGAAGGATCCTTTACGACCAATATGCAAGGTTGGCGACTTCGGCCTGTCAAAAATCAAGCGGAATACCCTGGTGACCGGTGGTGTGCGTGGAACTCTACCATGGATGGCACCCGAGCTTCTGAATGGGAGCAGCAATAAGGTCTCAGAAAAGGTTGATGTATTCTCCTTTGGGATTGTATTATGGGAGATTCTTACTGGTGAGGAGCCATATGCTAATATGCACTATGGTGCAATCATAGGAGGTATTGTGAACAACACACTAAGACCTACCATCCCAAGTTATTGTGATCTAGAATGGAGAACACTAATGGAGCAGTGTTGGGCACCTAACCCGGCAATCAGGCCATCGTTTACAGAAATAGCGCGCCGCTTGCGTGTGATGTCTGCTGCAGCAGCTAGTCAGACGAAAGGACAAGGACACAAAGCATCTAAATGA 3588 0.4359 MQKHPYNSMEPRKEEFHSAPQPGLQDHLDGMHANTRPSPSFNVSENKPVHNFSIQTGEEFALEFMRDRVNVNLKKPSFPNVVGDPNYSTGYMEFKGLLGHKGSESGSDVSMLASIEKGPKEFDRRSSVLHQERSNYGSGRSIPRTSSTNQDNNRVLHGISSSGSSDSLSRMKILCSFGGRILPRPSDGKLRYVGGETRIISIRKDINWPELMQKISSIYNETRVIKYQLPGEDLDALVSVTSDEDLRNMMEECHDLQRRRGSLKLRMFLFSINDLDDSQFGLGSMDGGDSEVQYVVAINGMNMESRSNSILRCAGSSNDIQELDRQTLDKETKRAVVESYGVGSSSLTGNVNPVLTNQSSQPVLPTSSNAYEAYPFFYEDPIIQQGGTSQYPIHNGPFPSNSSARNLADAPVSLPTFGVANQGITSEGQAMASGELHVQSSLPSRPFEGGLQGNLSEASVPAAVSEALHPAMPLENKISAAETEVLNPTQISRSGEDDFYPASTDAFSRALVDAESNIIDFSCLEPPPLPNRVYYSERIIPREHADLLNRSAKSDDAYGSHLLMADLLSDLNRMNSVSETSDMFHNENLSNLNTVSNSSAKPVRADGHAISNKHLPDATSQVNPKLYQLADSDSKPVLSDNKISENETNTSKDSHKILPVDETKGTENLAFRRVPSVEHNENLASKLQDQNLSEAPTREPLDAKSKPSQGDILIDIEDRFPRDFLYDMFSKAVHSEDSANISPLPADRAGLSLKMDNHEPKSWSYFQKLAHEGFDNVSLIDQDNIGFSSAVSKVKEGDSKFNISAPPPADVIVLTGPKESHSNINFGQENQNSLPVITKSEAIVFQPENNHSELKANENKNINAAPVENIRPQDSEYQDGNNEARDVAVAPQDISFDDFDISTLQIIMNADLEELRELGSGTFGTVYHGKWRGSDVAIKRIKKSCFSGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHAKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPSYCDLEWRTLMEQCWAPNPAIRPSFTEIARRLRVMSAAAASQTKGQGHKASK 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi464g00012 1195 MobiDBLite consensus disorder prediction 1 20 - -
Vivi464g00012 1195 MobiDBLite consensus disorder prediction 630 709 - -
Vivi464g00012 1195 Coils Coil 246 266 - -
Vivi464g00012 1195 Pfam Protein tyrosine and serine/threonine kinase 913 1175 IPR001245 GO:0004672|GO:0006468
Vivi464g00012 1195 ProSitePatterns Protein kinases ATP-binding region signature. 918 943 IPR017441 GO:0005524
Vivi464g00012 1195 SMART serkin_6 912 1178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi464g00012 1195 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1037 1049 IPR008271 GO:0004672|GO:0006468
Vivi464g00012 1195 Gene3D - 189 271 - -
Vivi464g00012 1195 Gene3D Phosphorylase Kinase; domain 1 906 999 - -
Vivi464g00012 1195 MobiDBLite consensus disorder prediction 681 695 - -
Vivi464g00012 1195 CDD PB1_UP2 174 270 - -
Vivi464g00012 1195 MobiDBLite consensus disorder prediction 630 645 - -
Vivi464g00012 1195 MobiDBLite consensus disorder prediction 1 47 - -
Vivi464g00012 1195 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 190 272 - -
Vivi464g00012 1195 MobiDBLite consensus disorder prediction 120 163 - -
Vivi464g00012 1195 MobiDBLite consensus disorder prediction 646 668 - -
Vivi464g00012 1195 SMART PB1_new 185 270 IPR000270 GO:0005515
Vivi464g00012 1195 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 905 999 - -
Vivi464g00012 1195 ProSiteProfiles Protein kinase domain profile. 912 1177 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi464g00012 1195 PANTHER SERINE-THREONINE PROTEIN KINASE 215 1176 - -
Vivi464g00012 1195 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 1000 1193 - -
Vivi464g00012 1195 PRINTS Tyrosine kinase catalytic domain signature 994 1007 IPR001245 GO:0004672|GO:0006468
Vivi464g00012 1195 PRINTS Tyrosine kinase catalytic domain signature 1031 1049 IPR001245 GO:0004672|GO:0006468
Vivi464g00012 1195 PRINTS Tyrosine kinase catalytic domain signature 1102 1124 IPR001245 GO:0004672|GO:0006468
Vivi464g00012 1195 PRINTS Tyrosine kinase catalytic domain signature 1146 1168 IPR001245 GO:0004672|GO:0006468
Vivi464g00012 1195 CDD STKc_MAP3K-like 918 1175 - -
Vivi464g00012 1195 SUPERFAMILY CAD & PB1 domains 186 277 - -
Vivi464g00012 1195 SUPERFAMILY Protein kinase-like (PK-like) 904 1174 IPR011009 -
Vivi464g00012 1195 MobiDBLite consensus disorder prediction 131 163 - -
Vivi464g00012 1195 Pfam PB1 domain 187 270 IPR000270 GO:0005515
Vivi464g00012 1195 Gene3D Transferase(Phosphotransferase) domain 1 1000 1195 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi464g00012 4 1195 MAP Kinase Kinase Kinase AT1G16270 44.062 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Vivi464g00012 PK_Tyr_Ser-Thr 6.1e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi464g00012 - - mtr:120578222 2034.61