Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi463g00030 ATGCCTATAAGAATATCCAATAGACTAGTAAAGAAAAAGTTGTGGAGAATATTAGGTTTTTTTTCATGTATCATTGGACTCATTTCATATGCATTCAGCTCTTCTTTCAATCATCTTTTTGGAGAGTGGAACTTCTTCAAAATCGTTATTTACACGGCGGTAAGTTTCATTATCAGTAGCATGATGTTATTAATGAAAAGATTGAAACTTTCAAGGAGATTCTTGATGAAAGCTCATTTGGGTGTTCTTGTTTTGTTGCTAACATCTTTATACTCTTTCGTATCTGATAATAAAAATTTGAATGGGAAACCAGACCTATTGAGTCTTATTTCGTGCGCAGCCTTTGCTTTAATGTCTTTTTGCTTATCAAGACATATTGATCTTGGTTTTGAATCTGATCTTCTCAATTTCTTCCTTGGAATTTTTACTCTTCAATTGATGAAAATCAACTTGATGCTATCTATTGTTGCTGCAATCTTCTGTTATTCTCTTATGGTTCTTCGTTCTAATTGGGATTTTTGCCGTGAAATTAGAAGTTTGAGAATGGAAAATGGTAGCGATCATCGTGATGTGGCCATAGAAATTGATGTTTTGGATAATGGTAGCCGACAGAACCAGTCTTTAAGATGGTTCGATCATAAGGATAGGTATAATTGGAAAAAATATGAAGAGAAATCAGCAAAAGGAAATGAAAACCAGAGAAGCTATTATAAATGTACTTGGCCTAATTGTATGGTGAAGAAAAAAGTTGAGAGAAGAATGGATGGAGATATAATTGAGACACTATGCAAAGGTATGCATAATCATCGCTTGCCTACGACTATAATGAAGAGGAGTTCATCATCTGAATATCTTTATGCACTTTTGCCTTCAGAGACTGGCCCCATTAATGACTTAACAAATCAATCATTTAGCAGAGATCAATTGGATTTTGGTGCTGAGCATGAAAGTTTCTTCCTATCAATATGA 969 0.3395 MPIRISNRLVKKKLWRILGFFSCIIGLISYAFSSSFNHLFGEWNFFKIVIYTAVSFIISSMMLLMKRLKLSRRFLMKAHLGVLVLLLTSLYSFVSDNKNLNGKPDLLSLISCAAFALMSFCLSRHIDLGFESDLLNFFLGIFTLQLMKINLMLSIVAAIFCYSLMVLRSNWDFCREIRSLRMENGSDHRDVAIEIDVLDNGSRQNQSLRWFDHKDRYNWKKYEEKSAKGNENQRSYYKCTWPNCMVKKKVERRMDGDIIETLCKGMHNHRLPTTIMKRSSSSEYLYALLPSETGPINDLTNQSFSRDQLDFGAEHESFFLSI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi463g00030 322 Gene3D WRKY domain 203 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi463g00030 322 SUPERFAMILY WRKY DNA-binding domain 211 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi463g00030 322 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 207 296 IPR044810 GO:0003700
Vivi463g00030 322 Pfam WRKY DNA -binding domain 214 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi463g00030 322 ProSiteProfiles WRKY domain profile. 215 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi463g00030 322 SMART WRKY_cls 213 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi463g00030 176 272 WRKY Transcription Factor Family AT2G03340 45.361 6.18e-21 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi463g00030 WRKY 2.4e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi463g00030 - - ccaj:109792596 338.191