LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi463g00026	ATGTTGTTGAGTTTGTTTTGGCAAACTCAGTGGGGATTCGAAAAGATGACGCATATGCTAACCCAAATTTGGAGATGGCTGGTGCAGCCAGAAGTGTGGAGATTTGTAGGCTTTGCCTCAGCTGTTGTTGGACTCGTCAGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAAGTTGGAATCTCTTGAAGGTTTTTCTTTACTGCATTTTCAGTTTCTTCATCAGCCTCATGATTTTCTTTGCAAAATTATTACAACACTCCACAAGTCTTCGGTTCAAAGCTCATACAGCATTTCTTGTACTGGCAATCACATCTGCCTATTCCTTTTTCTTCGACAAAAAGGTGAATGGGAAACCAGATCTATATAGCCTCATTTCATATGCTGCCTTTGCTATCATGTCACTCAGCCTGTCAAGGCAAACTCATTTTGGATTCGAAATCGATCTTCTCTACTTCTTTCTTGGATGTCTAATTGTGCTACTCATGAAGATTAAATTACAGTTATTTTTTGTTGGAGCAGGTTTCAGCTATTCCCTTATTATTCTCCGTTCTTCCTTTTCTTCAATAGATGCTGGAGCAAATAATCCGCACTCTGATCTCCAAAATGGAAATTCGGTGGTTCTTTCTATAGCTTCTCTACAACTCACCAGTACTGATACTGCTAGTGCTACTAGCAGTGCCAATAACAGTAGCATCGGTTCACCACAATTGGTGATCACCGCTGATATTAGTAATATGATGGAACAACTTCAGACATTTGTAACGGAGCTTCGGCGTGAAAATTCAAATTTCATTCAAATGGTGTTGGAGTATGTAAAAAAATATGTTGAGGAATACTCTGAATTGGTGGTAACCGATACTAACTTCATGATGGATGCGCTGAAGCCAGAAACCATCAAAGGCCTTGAGGAAACAGCAAAGGTTATGATGAGCTCTGGATTTGAGAAAGATTTTTCAGATGTCTACATCGATTGCCGTAGGGAATGCTTAAATGAGTGCCTAATGCATAGATTATTCGGGTTACAGAAGCTCAGCATCGAGGACATTCACAATATGCCATGGAACGTCCTCGAAGCCCAAATTGAGAAATGGATTAAAACTTTCAATATCACTCTGAAGATACTCTTTCCTGGCGAGCGACGAATCTGTGACCGCATTTTTTTTGGATCCTCATCGGCAGCTGATTTTTCCTTCGTGGAAATCTGCAGGGAATCCACCATTCAGTTGCTGAGTTTTGCTCAATCTGTCGCCTCTGGAAGCCATTCCCCAGACCGTTTGTTTAAAATGCTGGAGGTGTTGGAAACACTGCGTGACTTAATTCCAGAAATTGAATCGTTCTTTTGTGATGAATACAGTGTGTCTCTAAGGAATGAAGCAAACACCACACGGAAGAAATTGGAAGAAGCAATCAGAGACATTTTCATTCAATTGGAGGAATTTTACAGGCAAGAGCATAGGTATCTGGAGTCATTGGAGAGCAATTTAAATGCCAGATCCAAATTCTACGATGGCTCTTTTTCAGGGGATATTTTCTTGATGAACAATGGCACATACATAATCCCAATTGCAGAAGATAATGAATTAGGATCCCTTTTGGAGAATGATTGGATCCGACAATATGCTTGGAAAGTTTTGCACTACAATGGACAACAGAACATGAGCACTATCTCACCCGAATTAACCCATGAGGTGAATGTGAAAGATTCCGAAGCATTCCCCTGCCAACCGCGAGTAAGGACTCAAGACGTCATGGGTCGACCCTGGAAGAGGAGATTGGCTTCAAATATCCTAGGAGTATGTACAGGTGTTACCACATGA	1824	0.4101	MLLSLFWQTQWGFEKMTHMLTQIWRWLVQPEVWRFVGFASAVVGLVSYALSSSFNYLFGSWNLLKVFLYCIFSFFISLMIFFAKLLQHSTSLRFKAHTAFLVLAITSAYSFFFDKKVNGKPDLYSLISYAAFAIMSLSLSRQTHFGFEIDLLYFFLGCLIVLLMKIKLQLFFVGAGFSYSLIILRSSFSSIDAGANNPHSDLQNGNSVVLSIASLQLTSTDTASATSSANNSSIGSPQLVITADISNMMEQLQTFVTELRRENSNFIQMVLEYVKKYVEEYSELVVTDTNFMMDALKPETIKGLEETAKVMMSSGFEKDFSDVYIDCRRECLNECLMHRLFGLQKLSIEDIHNMPWNVLEAQIEKWIKTFNITLKILFPGERRICDRIFFGSSSAADFSFVEICRESTIQLLSFAQSVASGSHSPDRLFKMLEVLETLRDLIPEIESFFCDEYSVSLRNEANTTRKKLEEAIRDIFIQLEEFYRQEHRYLESLESNLNARSKFYDGSFSGDIFLMNNGTYIIPIAEDNELGSLLENDWIRQYAWKVLHYNGQQNMSTISPELTHEVNVKDSEAFPCQPRVRTQDVMGRPWKRRLASNILGVCTGVTT	607

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi463g00026	607	SUPERFAMILY	Cullin repeat-like	247	549	IPR016159	-
	Vivi463g00026	607	Coils	Coil	454	485	-	-
	Vivi463g00026	607	Gene3D	Exocyst complex component Exo70	241	486	-	-
	Vivi463g00026	607	Gene3D	Exocyst complex component Exo70	487	573	-	-
	Vivi463g00026	607	PANTHER	EXOCYST COMPLEX PROTEIN EXO70	488	549	IPR004140	GO:0000145\|GO:0006887
	Vivi463g00026	607	Pfam	Exo70 exocyst complex subunit	490	549	IPR046364	GO:0000145\|GO:0005546\|GO:0006887
	Vivi463g00026	607	Pfam	Exo70 exocyst complex subunit	365	486	IPR046364	GO:0000145\|GO:0005546\|GO:0006887

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi463g00026	286	550	EXO70 exocyst subunit family	AT5G58430	46.395	9.35e-75	249

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi463g00026	-		-	vvo:131631685	1095.11