Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi463g00025 ATGTTGTTGAGTTTGTTTTGGCAAACTCAGTGGGGATTCGAAAAGATGACGCATATGCTAACCCAAATTTGGAGATGGCTGGTGCAGCCAGAAGTGTGGAGATTTGTAGGCTTTGCCTCAGCTGTTGTTGGACTCGTCAGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAAGTTGGAATCTCTTGAAGGTTTTTCTTTACTGCATTTTCAGTTTCTTCATCAGCCTCATGATTTTCTTTGCAAAATTATTACAACACTCCACAAGTCTTCGGTTCAAAGCTCATACAGCATTTCTTGTACTGGCAATCACATCTGCCTATTCCTTTTTCTTCGACAAAAAGGTGAATGGGAAACCAGATCTATATAGCCTCATTTCATATGCTGCCTTTGCTATCATGTCACTCAGCCTGTCAAGGCAAACTCATTTTGGATTCGAAATCGATCTTCTCTACTTCTTTCTTGGATGTCTAATTGTGCTACTCATGAAGATTAAATTACAGTTATTTTTTGTTGGAGCAGGTTTCAGCTATTCCCTTATTATTCTCCGTTCTTCCTTTTCTTCAATAGATGCTGGAGCAAATAATCCGCACTCTGATCTCCAAAATGGAAATTCGGTGGTTCTTTCTATAGCTTCTCTACAACTCACCAGTACTGATACTGCTAGTGCTACTAGCAGTGCCAATAACAGTAGCATCGGTTCACCACAATTGGTGATCACCGCTGATATTAGTAATATGATGGAACAACTTCAGACATTTGTAACGGAGCTTCGGCGTGAAAATTCAAATTTCATTCAAATGGTGTTGGAGTATGTAAAAAAATATGTTGAGGAATACTCTGAATTGGTGGTAACCGATACTAACTTCATGATGGATGCGCTGAAGCCAGAAACCATCAAAGGCCTTGAGGAAACAGCAAAGGTTATGATGAGCTCTGGATTTGAGAAAGATTTTTCAGATGTCTACATCGATTGCCGTAGGGAATGCTTAAATGAGTGCCTAATGCATAGATTATTCGGGTTACAGAAGCTCAGCATCGAGGACATTCACAATATGCCATGGAACGTCCTCGAAGCCCAAATTGAGAAATGGATTAAAACTTTCAATATCACTCTGAAGATACTCTTTCCTGGCGAGCGACGAATCTGTGACCGCATTTTTTTTGGATCCTCATCGGCAGCTGATTTTTCCTTCGTGGAAATCTGCAGGGAATCCACCATTCAGTTGCTGAGTTTTGCTCAATCTGTCGCCTCTGGAAGCCATTCCCCAGACCGTTTGTTTAAAATGCTGGAGGTGTTGGAAACACTGCGTGACTTAATTCCAGAAATTGAATCGTTCTTTTGTGATGAATACAGTGTGTCTCTAAGGAATGAAGCAAACACCACACGGAAGAAATTGGAAGAAGCAATCAGAGACATTTTCATTCAATTGGAGGAATTTTACAGGCAAGAGCATAGGTATCTGGAGTCATTGGAGAGCAATTTAAATGCCAGATCCAAATTCTACGATGGCTCTTTTTCAGGGGATATTTTCTTGATGAACAATGGCACATACATAATCCCAATTGCAGAAGATAATGAATTAGGATCCCTTTTGGAGAATGATTGGATCCGACAATATGCTTGGAAAGTTTTGCACTACAATGGACAACAGAACATGAGCACTATCTCACCCGAATTAACCCATGAGGTGAATGTGAAAGATTCCGAAGCATTCCCCTGCCAACCGCGAGTAAGACGCAGGAAAACAACTCAGAATATGAGAACATTAGTGATATCTCCTACACAACAGTTTGGAAGCACATATCAAATACTGTATAAAATGCTTATACATCAAGACGGGTTTACATGGAAATTATACGGAACAAAATTGGACTCAAGACGTCATGGGTCGACCCTGGAAGAGGAGATTGGCTTCAAATATCCTAGGAGTATGTACAGGTGTTACCACATGAAGCAACGTGCGTGTCGAGCCAAAAAGAGTATCCAACAACTTGGTGACAATCCAAACGTGTTTGAAATAATATACTATCATGGACATTCCTGCAACACTCCCTTAATAAGACCAGCATCACAATCAGGCACACCAGCCGAATCCATAAACACTATACATGGAAAAGCTAGCTGGTCCTGCCGACGGTGGGTATCATCCTATGATGGAAAGCGTCGTATGCTATCTTCTTTCTGTCATTAA 2199 0.4084 MLLSLFWQTQWGFEKMTHMLTQIWRWLVQPEVWRFVGFASAVVGLVSYALSSSFNYLFGSWNLLKVFLYCIFSFFISLMIFFAKLLQHSTSLRFKAHTAFLVLAITSAYSFFFDKKVNGKPDLYSLISYAAFAIMSLSLSRQTHFGFEIDLLYFFLGCLIVLLMKIKLQLFFVGAGFSYSLIILRSSFSSIDAGANNPHSDLQNGNSVVLSIASLQLTSTDTASATSSANNSSIGSPQLVITADISNMMEQLQTFVTELRRENSNFIQMVLEYVKKYVEEYSELVVTDTNFMMDALKPETIKGLEETAKVMMSSGFEKDFSDVYIDCRRECLNECLMHRLFGLQKLSIEDIHNMPWNVLEAQIEKWIKTFNITLKILFPGERRICDRIFFGSSSAADFSFVEICRESTIQLLSFAQSVASGSHSPDRLFKMLEVLETLRDLIPEIESFFCDEYSVSLRNEANTTRKKLEEAIRDIFIQLEEFYRQEHRYLESLESNLNARSKFYDGSFSGDIFLMNNGTYIIPIAEDNELGSLLENDWIRQYAWKVLHYNGQQNMSTISPELTHEVNVKDSEAFPCQPRVRRRKTTQNMRTLVISPTQQFGSTYQILYKMLIHQDGFTWKLYGTKLDSRRHGSTLEEEIGFKYPRSMYRCYHMKQRACRAKKSIQQLGDNPNVFEIIYYHGHSCNTPLIRPASQSGTPAESINTIHGKASWSCRRWVSSYDGKRRMLSSFCH 732
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Vivi463g00025 732 PANTHER EXOCYST COMPLEX PROTEIN EXO70 488 549 IPR004140 GO:0000145|GO:0006887
Vivi463g00025 732 Gene3D Exocyst complex component Exo70 486 573 - -
Vivi463g00025 732 Gene3D Exocyst complex component Exo70 239 485 - -
Vivi463g00025 732 ProSiteProfiles WRKY domain profile. 608 687 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi463g00025 732 SMART WRKY_cls 613 686 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi463g00025 732 Coils Coil 454 485 - -
Vivi463g00025 732 SUPERFAMILY WRKY DNA-binding domain 606 687 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi463g00025 732 Pfam Exo70 exocyst complex subunit 365 486 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi463g00025 732 Pfam Exo70 exocyst complex subunit 490 549 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi463g00025 732 SUPERFAMILY Cullin repeat-like 248 549 IPR016159 -
Vivi463g00025 732 Pfam WRKY DNA -binding domain 614 685 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi463g00025 732 Gene3D WRKY domain 601 688 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi463g00025 286 550 EXO70 exocyst subunit family AT5G58430 46.395 2.17e-73 248
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi463g00025 Exo70 4.6e-27 CL0295
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi463g00025 - - vvo:131631685 1412.9