Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi463g00025 | ATGTTGTTGAGTTTGTTTTGGCAAACTCAGTGGGGATTCGAAAAGATGACGCATATGCTAACCCAAATTTGGAGATGGCTGGTGCAGCCAGAAGTGTGGAGATTTGTAGGCTTTGCCTCAGCTGTTGTTGGACTCGTCAGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAAGTTGGAATCTCTTGAAGGTTTTTCTTTACTGCATTTTCAGTTTCTTCATCAGCCTCATGATTTTCTTTGCAAAATTATTACAACACTCCACAAGTCTTCGGTTCAAAGCTCATACAGCATTTCTTGTACTGGCAATCACATCTGCCTATTCCTTTTTCTTCGACAAAAAGGTGAATGGGAAACCAGATCTATATAGCCTCATTTCATATGCTGCCTTTGCTATCATGTCACTCAGCCTGTCAAGGCAAACTCATTTTGGATTCGAAATCGATCTTCTCTACTTCTTTCTTGGATGTCTAATTGTGCTACTCATGAAGATTAAATTACAGTTATTTTTTGTTGGAGCAGGTTTCAGCTATTCCCTTATTATTCTCCGTTCTTCCTTTTCTTCAATAGATGCTGGAGCAAATAATCCGCACTCTGATCTCCAAAATGGAAATTCGGTGGTTCTTTCTATAGCTTCTCTACAACTCACCAGTACTGATACTGCTAGTGCTACTAGCAGTGCCAATAACAGTAGCATCGGTTCACCACAATTGGTGATCACCGCTGATATTAGTAATATGATGGAACAACTTCAGACATTTGTAACGGAGCTTCGGCGTGAAAATTCAAATTTCATTCAAATGGTGTTGGAGTATGTAAAAAAATATGTTGAGGAATACTCTGAATTGGTGGTAACCGATACTAACTTCATGATGGATGCGCTGAAGCCAGAAACCATCAAAGGCCTTGAGGAAACAGCAAAGGTTATGATGAGCTCTGGATTTGAGAAAGATTTTTCAGATGTCTACATCGATTGCCGTAGGGAATGCTTAAATGAGTGCCTAATGCATAGATTATTCGGGTTACAGAAGCTCAGCATCGAGGACATTCACAATATGCCATGGAACGTCCTCGAAGCCCAAATTGAGAAATGGATTAAAACTTTCAATATCACTCTGAAGATACTCTTTCCTGGCGAGCGACGAATCTGTGACCGCATTTTTTTTGGATCCTCATCGGCAGCTGATTTTTCCTTCGTGGAAATCTGCAGGGAATCCACCATTCAGTTGCTGAGTTTTGCTCAATCTGTCGCCTCTGGAAGCCATTCCCCAGACCGTTTGTTTAAAATGCTGGAGGTGTTGGAAACACTGCGTGACTTAATTCCAGAAATTGAATCGTTCTTTTGTGATGAATACAGTGTGTCTCTAAGGAATGAAGCAAACACCACACGGAAGAAATTGGAAGAAGCAATCAGAGACATTTTCATTCAATTGGAGGAATTTTACAGGCAAGAGCATAGGTATCTGGAGTCATTGGAGAGCAATTTAAATGCCAGATCCAAATTCTACGATGGCTCTTTTTCAGGGGATATTTTCTTGATGAACAATGGCACATACATAATCCCAATTGCAGAAGATAATGAATTAGGATCCCTTTTGGAGAATGATTGGATCCGACAATATGCTTGGAAAGTTTTGCACTACAATGGACAACAGAACATGAGCACTATCTCACCCGAATTAACCCATGAGGTGAATGTGAAAGATTCCGAAGCATTCCCCTGCCAACCGCGAGTAAGACGCAGGAAAACAACTCAGAATATGAGAACATTAGTGATATCTCCTACACAACAGTTTGGAAGCACATATCAAATACTGTATAAAATGCTTATACATCAAGACGGGTTTACATGGAAATTATACGGAACAAAATTGGACTCAAGACGTCATGGGTCGACCCTGGAAGAGGAGATTGGCTTCAAATATCCTAGGAGTATGTACAGGTGTTACCACATGAAGCAACGTGCGTGTCGAGCCAAAAAGAGTATCCAACAACTTGGTGACAATCCAAACGTGTTTGAAATAATATACTATCATGGACATTCCTGCAACACTCCCTTAATAAGACCAGCATCACAATCAGGCACACCAGCCGAATCCATAAACACTATACATGGAAAAGCTAGCTGGTCCTGCCGACGGTGGGTATCATCCTATGATGGAAAGCGTCGTATGCTATCTTCTTTCTGTCATTAA | 2199 | 0.4084 | MLLSLFWQTQWGFEKMTHMLTQIWRWLVQPEVWRFVGFASAVVGLVSYALSSSFNYLFGSWNLLKVFLYCIFSFFISLMIFFAKLLQHSTSLRFKAHTAFLVLAITSAYSFFFDKKVNGKPDLYSLISYAAFAIMSLSLSRQTHFGFEIDLLYFFLGCLIVLLMKIKLQLFFVGAGFSYSLIILRSSFSSIDAGANNPHSDLQNGNSVVLSIASLQLTSTDTASATSSANNSSIGSPQLVITADISNMMEQLQTFVTELRRENSNFIQMVLEYVKKYVEEYSELVVTDTNFMMDALKPETIKGLEETAKVMMSSGFEKDFSDVYIDCRRECLNECLMHRLFGLQKLSIEDIHNMPWNVLEAQIEKWIKTFNITLKILFPGERRICDRIFFGSSSAADFSFVEICRESTIQLLSFAQSVASGSHSPDRLFKMLEVLETLRDLIPEIESFFCDEYSVSLRNEANTTRKKLEEAIRDIFIQLEEFYRQEHRYLESLESNLNARSKFYDGSFSGDIFLMNNGTYIIPIAEDNELGSLLENDWIRQYAWKVLHYNGQQNMSTISPELTHEVNVKDSEAFPCQPRVRRRKTTQNMRTLVISPTQQFGSTYQILYKMLIHQDGFTWKLYGTKLDSRRHGSTLEEEIGFKYPRSMYRCYHMKQRACRAKKSIQQLGDNPNVFEIIYYHGHSCNTPLIRPASQSGTPAESINTIHGKASWSCRRWVSSYDGKRRMLSSFCH | 732 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi463g00025 | 732 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 488 | 549 | IPR004140 | GO:0000145|GO:0006887 | |
Vivi463g00025 | 732 | Gene3D | Exocyst complex component Exo70 | 486 | 573 | - | - | |
Vivi463g00025 | 732 | Gene3D | Exocyst complex component Exo70 | 239 | 485 | - | - | |
Vivi463g00025 | 732 | ProSiteProfiles | WRKY domain profile. | 608 | 687 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vivi463g00025 | 732 | SMART | WRKY_cls | 613 | 686 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vivi463g00025 | 732 | Coils | Coil | 454 | 485 | - | - | |
Vivi463g00025 | 732 | SUPERFAMILY | WRKY DNA-binding domain | 606 | 687 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Vivi463g00025 | 732 | Pfam | Exo70 exocyst complex subunit | 365 | 486 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 | |
Vivi463g00025 | 732 | Pfam | Exo70 exocyst complex subunit | 490 | 549 | IPR046364 | GO:0000145|GO:0005546|GO:0006887 | |
Vivi463g00025 | 732 | SUPERFAMILY | Cullin repeat-like | 248 | 549 | IPR016159 | - | |
Vivi463g00025 | 732 | Pfam | WRKY DNA -binding domain | 614 | 685 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Vivi463g00025 | 732 | Gene3D | WRKY domain | 601 | 688 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi463g00025 | 286 | 550 | EXO70 exocyst subunit family | AT5G58430 | 46.395 | 2.17e-73 | 248 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Vivi463g00025 | Exo70 | 4.6e-27 | CL0295 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi463g00025 | - | - | vvo:131631685 | 1412.9 |