Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi463g00023 ATGGCTGGTGCAGCCAGAAGTGTGGAGATTTGTAGGCTTTGCCTCAGCTGTTGTTGGACTCGTCAGTTATGCTCTAAGCTCTTCCTTCAACTATCTCTTTGGAAGTTGGAATCTCTTGAAGGTTTTTCTTTACTGCATTTTCAGTTTCTTCATCAGCCTCATGATTTTCTTTGCAAAATTATTACAACACTCCACAAGTCTTCGGTTCAAAGCTCATACAGCATTTCTTGTACTGGCAATCACATCTGCCTATTCCTTTTTCTTCGACAAAAAGGTTTCAGCTATTCCCTTATTATTCTCCGTTCTTCCTTTTCTTCAATAGATGCTGGAGCAAATAATCCGCACTCTGATCTCCAAAATGGAAATTCGGTGGTTCTTTCTATAGCTTCTCTACAACTCACCAGTACTGATACTGCTAGTGCTACTAGCAGTGCCAATAACAGTAGCATCGGTTCACCACAATTGGTGATCACCGCTGATATTAGTAATATGATGGAACAACTTCAGACATTTGTAACGGAGCTTCGGCGTGAAAATTCAAATTTCATTCAAATGGTGTTGGAGTATGTAAAAAAATATGTTGAGGAATACTCTGAATTGGTGGTAACCGATACTAACTTCATGATGGATGCGCTGAAGCCAGAAACCATCAAAGGCCTTGAGGAAACAGCAAAGGTTATGATGAGCTCTGGATTTGAGAAAGATTTTTCAGATGTCTACATCGATTGCCGTAGGGAATGCTTAAATGAGTGCCTAATGCATAGATTATTCGGGTTACAGAAGCTCAGCATCGAGGACATTCACAATATGCCATGGAACGTCCTCGAAGCCCAAATTGAGAAATGGATTAAAACTTTCAATATCACTCTGAAGATACTCTTTCCTGGCGAGCGACGAATCTGTGACCGCATTTTTTTTGGATCCTCATCGGCAGCTGATTTTTCCTTCGTGGAAATCTGCAGGGAATCCACCATTCAGTTGCTGAGTTTTGCTCAATCTGTCGCCTCTGGAAGCCATTCCCCAGACCGTTTGTTTAAAATGCTGGAGGTGTTGGAAACACTGCGTGACTTAATTCCAGAAATTGAATCGTTCTTTTGTGATGAATACAGTGTGTCTCTAAGGAATGAAGCAAACACCACACGGAAGAAATTGGAAGAAGCAATCAGAGACATTTTCATTCAATTGGAGGAATTTTACAGGCAAGAGCATAGGTATCTGGAGTCATTGGAGAGCAATTTAAATGCCAGATCCAAATTCTACGATGGCTCTTTTTCAGGGGATATTTTCTTGATGAACAATGGCACATACATAATCCCAATTGCAGAAGATAATGAATTAGGATCCCTTTTGGAGAATGATTGGATCCGACAATATGCTTGGAAAGTTTTGCACTACAATGGACAACAGAACATGAGCACTATCTCACCCGAATTAACCCATGAGGTGAATGTGAAAGATTCCGAAGCATTCCCCTGCCAACCGCGAGTAAGACGCAGGAAAACAACTCAGAATATGAGAACATTAGTGATATCTCCTACACAACAGTTTGGAAGCACATATCAAATACTGTATAAAATGCTTATACATCAAGACGGGTTTACATGGAAATTATACGGAACAAAATTGGACTCAAGACGTCATGGGTCGACCCTGGAAGAGGAGATTGGCTTCAAATATCCTAGGAGTATGTACAGGTGTTACCACATGAAGCAACGTGCGTGTCGAGCCAAAAAGAGTATCCAACAACTTGGTGACAATCCAAACGTGTTTGAAATAATATACTATCATGGACATTCCTGCAACACTCCCTTAATAAGACCAGCATCACAATCAGGCACACCAGCCGAATCCATAAACACTATACATGGAAAAGCTAGCTGGTCCTGCCGACGGTGGGTATCATCCTATGATGGAAAGCGTCGTATGCTATCTTCTTTCTGTCATTAA 1947 0.4114 MAGAARSVEICRLCLSCCWTRQLCSKLFLQLSLWKLESLEGFSLLHFQFLHQPHDFLCKIITTLHKSSVQSSYSISCTGNHICLFLFLRQKGFSYSLIILRSSFSSIDAGANNPHSDLQNGNSVVLSIASLQLTSTDTASATSSANNSSIGSPQLVITADISNMMEQLQTFVTELRRENSNFIQMVLEYVKKYVEEYSELVVTDTNFMMDALKPETIKGLEETAKVMMSSGFEKDFSDVYIDCRRECLNECLMHRLFGLQKLSIEDIHNMPWNVLEAQIEKWIKTFNITLKILFPGERRICDRIFFGSSSAADFSFVEICRESTIQLLSFAQSVASGSHSPDRLFKMLEVLETLRDLIPEIESFFCDEYSVSLRNEANTTRKKLEEAIRDIFIQLEEFYRQEHRYLESLESNLNARSKFYDGSFSGDIFLMNNGTYIIPIAEDNELGSLLENDWIRQYAWKVLHYNGQQNMSTISPELTHEVNVKDSEAFPCQPRVRRRKTTQNMRTLVISPTQQFGSTYQILYKMLIHQDGFTWKLYGTKLDSRRHGSTLEEEIGFKYPRSMYRCYHMKQRACRAKKSIQQLGDNPNVFEIIYYHGHSCNTPLIRPASQSGTPAESINTIHGKASWSCRRWVSSYDGKRRMLSSFCH 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi463g00023 648 ProSiteProfiles WRKY domain profile. 524 603 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi463g00023 648 PANTHER EXOCYST COMPLEX PROTEIN EXO70 404 465 IPR004140 GO:0000145|GO:0006887
Vivi463g00023 648 SUPERFAMILY Cullin repeat-like 163 465 IPR016159 -
Vivi463g00023 648 Gene3D Exocyst complex component Exo70 402 488 - -
Vivi463g00023 648 Gene3D Exocyst complex component Exo70 154 401 - -
Vivi463g00023 648 SUPERFAMILY WRKY DNA-binding domain 522 603 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi463g00023 648 Pfam WRKY DNA -binding domain 530 601 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi463g00023 648 Coils Coil 370 401 - -
Vivi463g00023 648 Gene3D WRKY domain 517 604 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi463g00023 648 SMART WRKY_cls 529 602 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi463g00023 648 Pfam Exo70 exocyst complex subunit 406 465 IPR046364 GO:0000145|GO:0005546|GO:0006887
Vivi463g00023 648 Pfam Exo70 exocyst complex subunit 281 402 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi463g00023 202 466 EXO70 exocyst subunit family AT5G58430 46.395 2.41e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi463g00023 Exo70 3.8e-27 CL0295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi463g00023 K07195 - vvo:131631685 1074.69