Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi463g00001 ATGGCTACAGAAGCGAGAGCCAAGTTCCAAAACCCGGATTACCGACCCGATTACCACCCAGAAACCACCTTGACGCCGTCAACCCACGACGGTCTTCACTTCTGGCAGTTAATGATTGCCGGATCCGTCGCCGGTTGCATCGAACACATGGCAATGTTTCCCGTCGACACCGTTAAAACTCACATGCAAGCAATCACTTCTTGTCCGATTAAATCCGTTTCCGTCCGTCAAGCCGTCCGTTCGATTCTCCAAACGGAAGGCCCCTCGGCGTTGTACCGCGGCATTGGCGCGATGGGGCTCGGCGCGGGGCCGGCACACGCGGTTTATTTCTCTGTTTATGAGACTTGTAAAAAGAAATTCTCGCAAGGGAACCCTAATAATTCGGTTGCTCATGCTGCTTCTGGTGTTTGTGCTACGGTTGCGAGTGATGCGGTGTTTACGCCGATGGATATGGTGAAACAGAGGTTGCAGTTGAGTAAGAGTGCTTACAAGGGGGTTTTTGATTGTGTGAAGAGGGTTTTGAGTGAGGAGGGGTTTGGGGCTTTTTATGCTTCGTATAGGACTACGGTTTTGATGAATGCGCCTTTTACGGCTGTGCATTTTGCTACTTATGAGGCAGCGAAAAGGGGGTTGAATGAGGTTTCGCCGGAGAGTGCCGATGATGAGAGGTTGATTGTTCATGCTACGGCTGGGGCGGCTGCTGGTGGTTTGGCTGCTGCTGTTACAACACCGCTTGATGTTGTTAAAACTCAACTACAATGTCAGGGTGTGTGTGGATGTGATAGGTTCAAAAATGGTTCAATTGGCGGTGTTATTAAAACAATAGTGAAAAAAGACGGACCCAGAGGGCTCATGCGAGGGTGGGTTCCAAGGATGCTCTTCCATGCTCCTGCAGCTGCTATTTGCTGGTCAACATATGAAGCTGGAAAGTCCTTTTTCCAAGATTACAACGAGCAGAAAGATAGCGGAACCGTCACCTAA 981 0.4995 MATEARAKFQNPDYRPDYHPETTLTPSTHDGLHFWQLMIAGSVAGCIEHMAMFPVDTVKTHMQAITSCPIKSVSVRQAVRSILQTEGPSALYRGIGAMGLGAGPAHAVYFSVYETCKKKFSQGNPNNSVAHAASGVCATVASDAVFTPMDMVKQRLQLSKSAYKGVFDCVKRVLSEEGFGAFYASYRTTVLMNAPFTAVHFATYEAAKRGLNEVSPESADDERLIVHATAGAAAGGLAAAVTTPLDVVKTQLQCQGVCGCDRFKNGSIGGVIKTIVKKDGPRGLMRGWVPRMLFHAPAAAICWSTYEAGKSFFQDYNEQKDSGTVT 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi463g00001 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 32 119 IPR018108 -
Vivi463g00001 326 FunFam Mitochondrial RNA-splicing protein MRS3 161 324 - -
Vivi463g00001 326 MobiDBLite consensus disorder prediction 1 20 - -
Vivi463g00001 326 Gene3D Mitochondrial carrier domain 162 326 IPR023395 -
Vivi463g00001 326 Pfam Mitochondrial carrier protein 127 213 IPR018108 -
Vivi463g00001 326 Pfam Mitochondrial carrier protein 32 122 IPR018108 -
Vivi463g00001 326 Pfam Mitochondrial carrier protein 223 316 IPR018108 -
Vivi463g00001 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 126 210 IPR018108 -
Vivi463g00001 326 Gene3D Mitochondrial carrier domain 17 161 IPR023395 -
Vivi463g00001 326 ProSiteProfiles Solute carrier (Solcar) repeat profile. 222 312 IPR018108 -
Vivi463g00001 326 SUPERFAMILY Mitochondrial carrier 30 307 IPR023395 -
Vivi463g00001 326 PANTHER MITOFERRIN-1-RELATED 28 315 - -
Vivi463g00001 326 PRINTS Mitochondrial carrier protein signature 231 253 IPR002067 GO:0055085
Vivi463g00001 326 PRINTS Mitochondrial carrier protein signature 141 159 IPR002067 GO:0055085
Vivi463g00001 326 PRINTS Mitochondrial carrier protein signature 50 64 IPR002067 GO:0055085
Vivi463g00001 326 PRINTS Mitochondrial carrier protein signature 37 50 IPR002067 GO:0055085
Vivi463g00001 326 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi463g00001 133 322 Chloroplast and Mitochondria Gene Families AT1G07030 26.768 2.09e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi463g00001 K15113 - gmx:100802640 576.244