Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi459g00002 ATGGCACCACCAAAGCGACTCCGCATCACTCCGCTCGACGATCCACCCACCGCCTCCTCTTCCTCCGATGAAGACCAACCACCTTCCTCCAAAAAGCCAGAAGATGATGTAGTCGATGAAGAAGATTCAGAAGAAGCAGGAGAAGAAACTGATCAGAATGAAGAAGATGATGAAGATGAAGATGAAGGTTCTTCATCCGAAGAAGAACAAGTTCAACCTCCTTCCAAAAATCCTCCACCTTCTACCCCAATCTCAAACCCTAAACCCGACTCCGGCTCCAAATTGGAATCTGGTGCCGAATCCGGATCAGAATCCGGATCCGAATCTGATAGTGAACAAGAACCTACTCCACCTAACGCCAAAGTCAAGCCTCTCGCATCAAAGCCCATGAAAACCCAAGCCCAATCTACTCCTGTACCGGCCAGATCTGGAACAAAGCGTGCAAACGAAAACGGTTCCAAATCTGCTAAGAAGAAAACAACCGCCACCGGCGGTGGTTCTGAAAACGAGGCGGATGGAGACGGTGACGTGAAAATGACCGGGGAAGACTCAAAGAAGATGAATCAGAGAGTCTTCACTGAAGGAGACGAGATTGCCATTCTGAAAGGTCTTGCTGACTTCATTTCCAAAACTGGAAAGGATCCGATGAAGGACCTGGTCGGATTTCATAGTTTTGTGAAGAAATCTATTCACAGGGATGCGACTACCGAACAGCTGAAGCGGAAGGTCCGTGGTTTGAAGATGAAGTTCAAAGACGGTGGTAGTTTCACTAAAGAGCATGATAAGAAAGCTTTTGAACTTTCCAAAAAGGTTTGGGGCAATACTGAAGGCAATAATAACGTAGGCAATGAAGGGGAAGCTCCGGTGAGAAACAATGGTTCTGCTAAGAAAGAAAAAGTTGTCAAGAATGGTGCTCGAAAAGATGAGGGTGGTGTTGATAGAAGCTTGGCTTTGAGTGAAATGCGTAGATTTGATGAAGCTGCGGGGTTATCCTTGTTGAACGTGAATGCTATGGAAAGGGGAATAGGATTGTTGGAGGAGTCCATGGTTGATGAGTTTAACGAGGGATGGAGAAAGGTTCAAATTGCGGAGATGGAACTGTTTGTGACCCGGGGGCAACTGGTTACGGATCAGGCTAGGATAGCATTGGACGCGTTGAAGAAGACGCGTTGA 1173 0.4697 MAPPKRLRITPLDDPPTASSSSDEDQPPSSKKPEDDVVDEEDSEEAGEETDQNEEDDEDEDEGSSSEEEQVQPPSKNPPPSTPISNPKPDSGSKLESGAESGSESGSESDSEQEPTPPNAKVKPLASKPMKTQAQSTPVPARSGTKRANENGSKSAKKKTTATGGGSENEADGDGDVKMTGEDSKKMNQRVFTEGDEIAILKGLADFISKTGKDPMKDLVGFHSFVKKSIHRDATTEQLKRKVRGLKMKFKDGGSFTKEHDKKAFELSKKVWGNTEGNNNVGNEGEAPVRNNGSAKKEKVVKNGARKDEGGVDRSLALSEMRRFDEAAGLSLLNVNAMERGIGLLEESMVDEFNEGWRKVQIAEMELFVTRGQLVTDQARIALDALKKTR 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi459g00002 390 Pfam Protein of unknown function, DUF573 189 273 IPR007592 GO:0006355
Vivi459g00002 390 MobiDBLite consensus disorder prediction 129 167 - -
Vivi459g00002 390 MobiDBLite consensus disorder prediction 291 308 - -
Vivi459g00002 390 MobiDBLite consensus disorder prediction 37 67 - -
Vivi459g00002 390 MobiDBLite consensus disorder prediction 1 187 - -
Vivi459g00002 390 PANTHER BNAANNG10740D PROTEIN-RELATED 91 385 IPR007592 GO:0006355
Vivi459g00002 390 MobiDBLite consensus disorder prediction 87 116 - -
Vivi459g00002 390 MobiDBLite consensus disorder prediction 171 187 - -
Vivi459g00002 390 MobiDBLite consensus disorder prediction 273 308 - -
Vivi459g00002 390 MobiDBLite consensus disorder prediction 273 287 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi459g00002 77 387 GeBP Transcription Factor Family AT4G00390 30.030 4.66e-26 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Vivi459g00002 DUF573 3e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi459g00002 - - vvo:131633905 528.48