Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi450g00016 ATGGACTGCAATAAAGAAGAGGCCTTAAGGGCCAAGGATATTGCTGAAAAGAAAATGGAAAGCAAAGATTTCATAGGGGCTCGTACATTTGTCAATAAGGCTCAAAAACTATATCCCGATCTGGAGAATATCGCTCAAATGCTTGTTATTTGTGATGTGCATTGCTCTGCTGAGCCAAAATTACAAGGTAATACAAATGTGGTGGACTGGTATAAAGTTTTACAAATTGATCGCAATGATAATGATGCAATAATTAAGAAGCAGTACAAGAAGTTTGCTCTCCAACTCCATCCTGACAAAAACAAGTTTGCTGGTGCAGAAGCTGCATTTAAGCTGATTGGAGAAGCTCAAAGAGTTCTTTTGGATAGAGATAAACGTTTATTACTTAACATGAGCTTGAGCAAGTTTTCAATGAGCAGAACTGCCATGCCATCTCATCAACGGAGTGTTCCAGTGAATTTTAATCCTGTAATGCAAACTAATTTCCGGCCCATTTTCACAAACATAAATCCTCAGCAGCCGCAACCGCAGCCACCGCAATCACAGCCGCCGCAACCGCAGCAGTCTAAGCATCCATTTCAGCATGGGCTTAATGCTGGTGACGGTTCTACTTTTTGGACTATGTGCTCATTTTGTTCAGTGAAGTTTGAGTATTACCGGTCAGTTTTAAATAGATCTCTTCGCTGTCAACGTTGCAGTAAGCCCTTCGTTGCATATGAGGTGGATCCGCATGGTACCAAACCAGCAACTAATTCAAGTCGGAAAACTTTTGGCCATCAGAACAATACTCCGAATCATGTTGCTTCTAAGGTTGATGTTGGATCTCAAGGTGGTTTGCGTGCTCAGAGGTCCAATAAGGAATCTCATCATAAGAAAGGCTCTACTTCAAATGTCTCTGCAAAGCCAAATGAAAAGAGAAAGAGAAAGCATATAGTACATTCCAGTGAAAGTTCCGAGTCTATAGGCAGCACTGATTCTGAAGATGAAGATGATTCATTTTCTAACAATGGTTTTCCTGGTGTTTCGACTTCTAGAGATGAGCGTCCACGTAGATCTACACGGCAAAAGCACCAGGTTTCCTACAACGAGAATGTAAGTGATAATGATGATGAGTTGGAACCTTCAAAACAGGGTAAGGAAAGTGTTTCACCCCAAAGTGATCGTGAAAATAATCAGGAGGAAACTGAAACAAATGATCAGAATGGTTTGGCTGCTGGTCTGAAAGATGATTTGAAAGGGGTAAAGCAGCAGAAGCAAAAAATTAATTCTGAAGAGAGCTTAAAAAATATAGATGTAAAAATTAAGGAGGTGGGAGGAAAAGAAACAGCGGGCAGCTCAAAGATTGATGAAGTTTCAGATCATTCAGACTCCAAATCATCAAATCATTCAGATGGTTTTGTTTATCCTGATCCAGAGTTCAGTGACTTTGACAAAGACAAGAAAGAGGGATGCTTCACTCCCGGGCAGATTTGGGCTGTTTATGATGACACAGATGGCATGCCTAGATTCTACGCTCTAATCAAAAAAGTTTTTTCTCCTGGATTCAAGTTGCAGATAACTTGGCTCGAGGCAGATCCTGATGACGAAGATGAACTCAGGTGGATTGAGGAGAAACTGCCAAGTTCCTGTGGGAAATATAAACTTGGTAAGACTGTAACCATTAAAGATCAACCGATGTTCTCTCATCTGACTTTATGGGAAAGGATTACCCGTACTACTTTTAAAGTGTATCCTAGAAAAGGAGAAACTTGGGCTCTTTTTAAGAATTGGGATATTAAATGGTATCTGGATGCTGAATCTCATCAGAAGTATGATTTGGAATATGTTGAGATCTTGTCGGATTATGTTGAAGGCGCAGGAGTAATTGTTGCATACTTGGCTAAGTTGAAAGGTTATGTGAGCCTCTTCTCTCGAATTACAAATGGAGGTACCCAACCATTTCAAATATCACCAGCTGAGTTGTTCAGATTCTCTCATAGGATTCCATCTTTTAAAATGACTGGTCAGGAAAGAGCAGGCGTTCCTGAAGGATGTTATGAGCTCGATCCTATATCCTTGCCGATAGAAGAGATTGGCGCTCCTGATGATTTAGAAGTGAACGTTGCATCTTCTGCCAAGGTGAATTTGGAAAAAAGCGAATCAGTAGAGAAGAAGGACCCTGTTGATCATATTGATGATGTTAGTGCTCCATCAGCTTCGGTCCCAGATTCTTTTGAAGTTCCAGACCCTTCGTTCTACCAATTTGATGCTGAGAGGTCTCATGAAAAGTTTGAGGCTGGCCAGATTTGGGCATTTTATGGTGATGAGGACGAACTTCCAAAATACTACGGCCAGATTAAAGGGGTTAGGAGGATTGGCCCAAAAATTGAGTTGGAAGTATTTTATCTTACTGACTGCTGGCTACCTAAGAAAGTTATTAGATGGGATGATAAAGATATGATCATTTCTTGTGGAAGATTTAAAGTCAAGCCAAATGCCAAGCTTTGCACTTACAGCAACACCAATTCTATTTCACATCAGGTGCATCCTAGTTCTATTTCACATCAGGTGTATGAAATTTTTCCGCGGAAGGGTGAAATTTGGGCATTATATAGGGACTGGACGACTAAAATCAAACGTTCTGATTTGAAAAACTGGAAGTATGATATAGTGGAAATTATTGAAGACGGTGATATGTGGACAGATGTTTTGTTTCTAGAGAAGGTAAGTGGTTACTGTTCAGTTTTTAAGGGCAAGTTAAGTAGCGGAGGATCAACGATGACCATGACGATCTCAAAGAATGAGGTGCTCAAATTTTCCCACAAGATACCTGCTTTCAAACTTACAGAAGAACATGGCAACAATCTGAGAGGCTTCTGGGAACTTGATCCGGGTGCAATACCACTGCATTATCTTAGCAAGGAATGA 2907 0.4056 MDCNKEEALRAKDIAEKKMESKDFIGARTFVNKAQKLYPDLENIAQMLVICDVHCSAEPKLQGNTNVVDWYKVLQIDRNDNDAIIKKQYKKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDRDKRLLLNMSLSKFSMSRTAMPSHQRSVPVNFNPVMQTNFRPIFTNINPQQPQPQPPQSQPPQPQQSKHPFQHGLNAGDGSTFWTMCSFCSVKFEYYRSVLNRSLRCQRCSKPFVAYEVDPHGTKPATNSSRKTFGHQNNTPNHVASKVDVGSQGGLRAQRSNKESHHKKGSTSNVSAKPNEKRKRKHIVHSSESSESIGSTDSEDEDDSFSNNGFPGVSTSRDERPRRSTRQKHQVSYNENVSDNDDELEPSKQGKESVSPQSDRENNQEETETNDQNGLAAGLKDDLKGVKQQKQKINSEESLKNIDVKIKEVGGKETAGSSKIDEVSDHSDSKSSNHSDGFVYPDPEFSDFDKDKKEGCFTPGQIWAVYDDTDGMPRFYALIKKVFSPGFKLQITWLEADPDDEDELRWIEEKLPSSCGKYKLGKTVTIKDQPMFSHLTLWERITRTTFKVYPRKGETWALFKNWDIKWYLDAESHQKYDLEYVEILSDYVEGAGVIVAYLAKLKGYVSLFSRITNGGTQPFQISPAELFRFSHRIPSFKMTGQERAGVPEGCYELDPISLPIEEIGAPDDLEVNVASSAKVNLEKSESVEKKDPVDHIDDVSAPSASVPDSFEVPDPSFYQFDAERSHEKFEAGQIWAFYGDEDELPKYYGQIKGVRRIGPKIELEVFYLTDCWLPKKVIRWDDKDMIISCGRFKVKPNAKLCTYSNTNSISHQVHPSSISHQVYEIFPRKGEIWALYRDWTTKIKRSDLKNWKYDIVEIIEDGDMWTDVLFLEKVSGYCSVFKGKLSSGGSTMTMTISKNEVLKFSHKIPAFKLTEEHGNNLRGFWELDPGAIPLHYLSKE 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi450g00016 968 MobiDBLite consensus disorder prediction 439 460 - -
Vivi450g00016 968 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN-RELATED 1 961 - -
Vivi450g00016 968 MobiDBLite consensus disorder prediction 240 405 - -
Vivi450g00016 968 MobiDBLite consensus disorder prediction 439 480 - -
Vivi450g00016 968 Pfam Domain of unknown function (DUF3444) 466 670 IPR024593 -
Vivi450g00016 968 Pfam Domain of unknown function (DUF3444) 736 944 IPR024593 -
Vivi450g00016 968 MobiDBLite consensus disorder prediction 166 197 - -
Vivi450g00016 968 MobiDBLite consensus disorder prediction 246 270 - -
Vivi450g00016 968 PRINTS DnaJ domain signature 89 104 IPR001623 -
Vivi450g00016 968 PRINTS DnaJ domain signature 105 125 IPR001623 -
Vivi450g00016 968 PRINTS DnaJ domain signature 71 89 IPR001623 -
Vivi450g00016 968 MobiDBLite consensus disorder prediction 711 735 - -
Vivi450g00016 968 SMART dnaj_3 68 125 IPR001623 -
Vivi450g00016 968 MobiDBLite consensus disorder prediction 171 186 - -
Vivi450g00016 968 ProSiteProfiles dnaJ domain profile. 69 133 IPR001623 -
Vivi450g00016 968 MobiDBLite consensus disorder prediction 711 725 - -
Vivi450g00016 968 Pfam DnaJ domain 69 126 IPR001623 -
Vivi450g00016 968 MobiDBLite consensus disorder prediction 369 395 - -
Vivi450g00016 968 CDD DnaJ 69 119 IPR001623 -
Vivi450g00016 968 Gene3D DnaJ domain 67 177 IPR036869 -
Vivi450g00016 968 SUPERFAMILY Chaperone J-domain 66 136 IPR036869 -
Vivi450g00016 968 Coils Coil 404 424 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi450g00016 15 241 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT5G64360 30.000 2.41e-22 99.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi450g00016 - - psat:127079111 1687.16