Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi450g00013 ATGAACCAGTATCACATCTACGAAGCCATTGGCCGTGGCAGATACTCCACCGTGTATAAAGGTAGAAAGAAGAAGACGATCGAGTATTTCGCAATCAAAAGCGTTGATAAATCTCAGAAAAACAAGGTTCTTCAAGAAGTTAGGATTCTTCACACTTTGGATCACCAAAATGTGCTCAAGTTTTATTCATGGTATGAAACTTCTGCTCACTTATGGTTGGTCTTGGAGTATTGTGTGGGTGGGGATCTACTTTCGATCTTACGGCAGGATATTCAGCTTCCAGAGGAATCTGTTAATGAGCTTGCTTGTGACCTCGTTAGAGCTCTGCAGTATTTACATTCAAATGGAATAATTTATTGTGATTTGAAACCATCAAATATTCTACTAGATGAAAATGGTCGTACAAAGCTCTGTGATTTCGGATTGGCCAGAAAGTTAAAAGAGATATCGAAAGTTCCTTCTTCATCGTTGCCTCAAGCAAAACGTGGAACACCCTCTTACATGGCTCCGGAGCTTTTTGAAGATGGCGGAGTTCATTCTTATGCTTCTGATTTCTGGGCTCTAGGCTGTGTGCTATATGAGTGTTATACTGGGAAGCCTCCTTTTGTGGGTAGAGAATTCACGCACCTTGTAAAATCCATCATTTCAGACCCGACTCCACCTCTCCCTGGAAATCCAAGTCGACCTTTTGTCAATTTAATTAATTCTCTGTTGGTCAAAGATCCAGCCGAAAGAATACAGTGGCCTGAGCTTTGTGGTCATGCCTTTTGGAAAACCAAATTCTCTCTAGTGTCTCTTCCTTCTCAACCTGCATTTGATGATATGATAGAGCTTCATGCTAAACCATGCTTATCAGAACGTAATGGAGATAAGTCTTCTCATAACAGAACCCCTCCCAAATATCGTGAAAAAGACACGAAAGGAGTGCTAAAAAAGGACGAAAATTCTGGTTTAGGATCAAGGGGCATTGAGACACCAACAAGGGCAACACCAAATAGTCACAGAACTCAGACAAAGGGATCTGGTCGAGCAGTTGAGGTCAAGCAGAAAGATTCCAATATTAAAAAAGGTTTGAATCTTTTGAGACTTTCAAGAATAGCAAAATCAAATTTACAAAAAGAAAATGAGAAAGAAAACTATCGTCGCCCCTTGCCCAATGGCTCTGAGAAGGATGCAGACGTTAAGATTGAGAACACTGACATGGAACTTGATTTTAATGAGAATAGTGAAGAGGATACACTTGAAGAAACTGATGGTTCTGAGCACACACCTGTGCCCAATGAGAAAATGGAGAATAGTTTTCAGAATCAGGGAAAAGCAGAGGACACTGAAAATGTTATTCACCGGTTGGACACCTTATCTGTGACTACTCCTGCCTCAGACGATTCAAGGTCATTCGATCACGAGTCAACTCCTGACCGTTCTGACATATCTGCTATTTCTCCAAGTGTAAGCCCTCTAGTGAAAAAACATAGGCCAAAAGAAGATTTAGGTTCTGGCCTTGACTCAGATTCTTCAAGATCATCAAACGACAATTCCCAGGTTATTTGGCATCCATCTGATCTCTCAGTCAGACCTGTAATGCCCAGCAGAAAAGTTGACAAAGGCTCGGAAGCCATCCCTTCACTTCCTTTTGAGGCGTTGCAAGCACCTGATTTTATCAAAATGCCTAAAGAGCAATTGGAGGCAGTGCATAACCGAATTATAGCCATCTTGAATGGGAATACTAGCATTGGAGAAAAACAAAATGTGGTTAGGTACCTCGAGATGTTGAGCAGTAATGCTGATGCAGCCAATATCTTGACCAATGGGCCAATAATGCTCATTCTCATAAAATTGCTACGTCAATCTAAGGCATCAGCTTTACGTGTTCAACTTGCTTCACTGATTGGTCTGTTGATCAGACACTCTACCTTTGTTGATGACAGTTTGGCTAATTCTGGAATTCTAGGTTCACTGACGGATGGCCTTAGGGACAGACAGGAAAAAGTAAGAAGGTTTTCTATGGCTGCTTTGGGTGAGTTGCTATTTTATATATCTACCCAAAGTGCTGACTCTAAAGATAACACTCCGCTTGAATCTCCATCAAAGGACAATAGGACCGCACATGGCTGGCAGGTTCCAAATTCATTAATTTCCCTTGTGACAGCGATATTGAGAAAAGGTGAGGATGATATAACTCAGTTGTATGCATTGAGAACAGTTGAGAATATTTGCAGCCAAGGAGGGGTCTGGGTGGGACGTTTCACCAGTCAAGATGTAATTAATAATCTCTGCTATATCTATAGAGCGGCAGGGAAACAGGAAAGCATGAGGCTTACTGCAGGATCATGTTTAGTACGCTTAGTTCGCTTTAATCCTTCTAGCATTCAGTCTGTTATAGAGAAACTCTCATTCAAGGATCTAGCTTCTGCTCTTGTCAAAGGCAGTCCGCGAGAGCAGCAAATTAGCTTAAATCTTCTTAACTTAGCAATGCTTGGAAGTCATATGCTCACAAATGTTGGAAGATACCTTATACAACTTTCAGAGGATAAAAATCTGATCCCAAGTCTTTTGTCCCTTGTTGAGCAGGGTAGTGAAGTTTTAAAAGGAAAGGCACTTGTTTTTGTGGCTCTCCTCTGCAAGCACGGTAGAAGGTGGCTTCCACAGTTCTTTTGCAGCCATAAGTTACTCTCAGTGGTGGATAGGCTGGGAAAAGAGAAGGATGCCTTTGTGCGGCAGTGTTTAGTTGCATTTCTGCATATTGTGGCATCTACTATTCCAGGTTTACTGGATATAATAACAGGGGATATCCAGCAAATGATGGGAGGAAGGCGCCATGGACATATCTCTTCCCTTACCGGCAGATCTGCTCCAAAAGCCAATATTAATTTGTTTCCTGTTGTCCTTCATCTTCTTGAAAGTTCAGCTTTTAAGCATAAAGTGGCGACACTTCCAGTACTACGGCAGTTGGCGAATCTCATTAAACTCGCAGAGGCACCGTTTCAGGGAAGAGATGACTTCCAAATAACCCTTCTCCGAATTTTAGAGTCTCTCACGGAGGAATCTTCTGTGATCCTTGGCAATCCTGACATTTTCATTCGTGAAATCCTCCCTAGTTTGACAGTTCTCTACAAGGGTAACAAGGACGGTGATGCCAGATTTTTGTGCCTTAAAATCTTTTTTGATGTGATGATTATTCTCTTGAGTGAACCAATTGAAGAAGAGCAAAGACTGAACGATCTGAAGTTCGTATCGAATACACATTTTCTTCCTCTCTACCCAACCTTGATCGAAGATGAAGATCCGATTCCTATCTTTGCACAGAAGCTTCTTGTCATGTTATTAGAGTTCAGTTTTATTTCAATTCCAGACATTTTACACCTGAAGACAATATCACAATGTTTTGAGTTCTTGCTTGGTGATCTGTCAAATGCAAATGTGAATAATGTTAAGCTGTGTCTTGCTCTGGCTTCTGCTCCTGAAATGGAGTCAAAGTTACTCTCCCAATTGAAAGTTGTTAGGAGGATTGGTAATTTTCTTGAGTTTGTATGTGCAAAGGGTATGGAAGATTTACTGGAACCAACTCTTGGGCTGTGTAGGGCCTTTTTAGCACGTTCAGTCAGCTGTACAAAAGGCTTCAGAAACACAACAGAACCAACTCTCTTAGGCGACTGTCCTCCTGAGGTGAGTGGAGCAGTTGACCCCCAGCAATGCATAAGAGATATAACAGACTTTGGAAACAATGTTGGTGTCTTCCTAGAGTTGAGCGCATCTAGGGAAACCAGTATTGCCGATATAGCTTCTGAGTGTGTGATTTTACTGCTCAAGGCCGCTCCTAGAGAAGCCACAACCGGTCTACTAACCAATCTCCCCAAGGTCACTGTGATCCTAGAATCCTGGAGTAAAGGCATCCCTCATTTAACGGTTCAGAGAATGCTTCATGCGTTAGGTTATGCTTGCAAGCAGTACTTATTGCACGCAATGATATTATCAATATCAATACCAGAGATTTCAAGAATTGAAGGAATAGTTTCTGAACTCAAGAGTTCAAGTGTCCCTGCTTTAGCCAAAACTGCTGGATTGGCTGCCTTGGAGTTGCAGCGGCTACCTCGCTGCATTTGA 4104 0.4191 MNQYHIYEAIGRGRYSTVYKGRKKKTIEYFAIKSVDKSQKNKVLQEVRILHTLDHQNVLKFYSWYETSAHLWLVLEYCVGGDLLSILRQDIQLPEESVNELACDLVRALQYLHSNGIIYCDLKPSNILLDENGRTKLCDFGLARKLKEISKVPSSSLPQAKRGTPSYMAPELFEDGGVHSYASDFWALGCVLYECYTGKPPFVGREFTHLVKSIISDPTPPLPGNPSRPFVNLINSLLVKDPAERIQWPELCGHAFWKTKFSLVSLPSQPAFDDMIELHAKPCLSERNGDKSSHNRTPPKYREKDTKGVLKKDENSGLGSRGIETPTRATPNSHRTQTKGSGRAVEVKQKDSNIKKGLNLLRLSRIAKSNLQKENEKENYRRPLPNGSEKDADVKIENTDMELDFNENSEEDTLEETDGSEHTPVPNEKMENSFQNQGKAEDTENVIHRLDTLSVTTPASDDSRSFDHESTPDRSDISAISPSVSPLVKKHRPKEDLGSGLDSDSSRSSNDNSQVIWHPSDLSVRPVMPSRKVDKGSEAIPSLPFEALQAPDFIKMPKEQLEAVHNRIIAILNGNTSIGEKQNVVRYLEMLSSNADAANILTNGPIMLILIKLLRQSKASALRVQLASLIGLLIRHSTFVDDSLANSGILGSLTDGLRDRQEKVRRFSMAALGELLFYISTQSADSKDNTPLESPSKDNRTAHGWQVPNSLISLVTAILRKGEDDITQLYALRTVENICSQGGVWVGRFTSQDVINNLCYIYRAAGKQESMRLTAGSCLVRLVRFNPSSIQSVIEKLSFKDLASALVKGSPREQQISLNLLNLAMLGSHMLTNVGRYLIQLSEDKNLIPSLLSLVEQGSEVLKGKALVFVALLCKHGRRWLPQFFCSHKLLSVVDRLGKEKDAFVRQCLVAFLHIVASTIPGLLDIITGDIQQMMGGRRHGHISSLTGRSAPKANINLFPVVLHLLESSAFKHKVATLPVLRQLANLIKLAEAPFQGRDDFQITLLRILESLTEESSVILGNPDIFIREILPSLTVLYKGNKDGDARFLCLKIFFDVMIILLSEPIEEEQRLNDLKFVSNTHFLPLYPTLIEDEDPIPIFAQKLLVMLLEFSFISIPDILHLKTISQCFEFLLGDLSNANVNNVKLCLALASAPEMESKLLSQLKVVRRIGNFLEFVCAKGMEDLLEPTLGLCRAFLARSVSCTKGFRNTTEPTLLGDCPPEVSGAVDPQQCIRDITDFGNNVGVFLELSASRETSIADIASECVILLLKAAPREATTGLLTNLPKVTVILESWSKGIPHLTVQRMLHALGYACKQYLLHAMILSISIPEISRIEGIVSELKSSSVPALAKTAGLAALELQRLPRCI 1367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi450g00013 1367 MobiDBLite consensus disorder prediction 426 441 - -
Vivi450g00013 1367 Gene3D - 554 918 IPR011989 -
Vivi450g00013 1367 FunFam Maternal embryonic leucine zipper kinase 1 293 - -
Vivi450g00013 1367 Coils Coil 1367 1367 - -
Vivi450g00013 1367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 117 129 IPR008271 GO:0004672|GO:0006468
Vivi450g00013 1367 Gene3D Transferase(Phosphotransferase) domain 1 1 309 - -
Vivi450g00013 1367 MobiDBLite consensus disorder prediction 320 343 - -
Vivi450g00013 1367 SMART serkin_6 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi450g00013 1367 MobiDBLite consensus disorder prediction 372 402 - -
Vivi450g00013 1367 CDD STKc_ULK4 3 257 - -
Vivi450g00013 1367 MobiDBLite consensus disorder prediction 403 417 - -
Vivi450g00013 1367 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Vivi450g00013 1367 MobiDBLite consensus disorder prediction 372 521 - -
Vivi450g00013 1367 MobiDBLite consensus disorder prediction 283 318 - -
Vivi450g00013 1367 FunFam Aurora kinase A 1 81 - -
Vivi450g00013 1367 MobiDBLite consensus disorder prediction 283 351 - -
Vivi450g00013 1367 SUPERFAMILY ARM repeat 553 1138 IPR016024 -
Vivi450g00013 1367 SUPERFAMILY Protein kinase-like (PK-like) 1 258 IPR011009 -
Vivi450g00013 1367 ProSiteProfiles Protein kinase domain profile. 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi450g00013 1367 MobiDBLite consensus disorder prediction 502 519 - -
Vivi450g00013 1367 PANTHER SERINE/THREONINE-KINASE ULK4-LIKE PROTEIN-RELATED 1 1364 IPR044591 GO:0000911|GO:0000914|GO:0008017
Vivi450g00013 1367 Pfam Protein kinase domain 4 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi450g00013 1 246 AGC Kinase Gene Family AT1G45160 35.507 1.43e-37 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_ULK4 Vivi450g00013 Pkinase 9.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi450g00013 K17545 - gmx:100777288 2360.87