Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi450g00005 | ATGGGTTGTGTGTTTGGTAAAGAGTCATTGGTGGAGGAGAGGAGAGAGGAAGTGAGAGAAGAGAAGGTAGATGTGGGTGGTGGTGGTGGAGAGGTTGAGAATGTGAAAGAGGGTGGAGAGGAGAAGAGAGTGAGGCATGGTGGGGAGAGAAGAAGGCGATCTTCGAAGGCGAATCCGAGGTTGAGTAATCCTTCTAACAATGTTCATGGTGAACAGGTTGCTGCTGGTTGGCCTTCTTGGCTTTCTAAGGTTGCTGGTGAAGCTATCAATGGTTTGGTTCCTAGGAGGGCTGATACTTTTGAGAAGCTTGATAAGATTGGGCAAGGTACATATAGCAATGTTTACAAGGCTAGGGATACTTTAACAGGGAAGATTGTTGCTCTAAAGAAGGTTCGTTTCGATAATTTAGAGCCCGAGAGTGTGAAGTTTATGGCTAGAGAGATTCTGATTCTGCGTCGGTTGGATCATCCCAATGTTGTTAAACTTGAAGGCTTGGTGACTTCTAGAATGTCGTGTAGTTTATATCTTGTGTTTGAATATATGGCTCATGATTTGGCTGGACTCGCTACAAACCCTGCGATTAAGTTCACAGAGCCTCAGGTAAAATGTTACATGCATCAACTATTTTCTGGGCTGGAACACTGTCACAACCGTCACGTGCTGCATCGTGATATAAAGGGTTCAAATCTTCTTATTGACAACGATGGAATTCTCAAGATTGCTGATTTTGGATTAGCTTCCTTCTTTGATCCTGATCACAAGCACCCGATGACAAGTAGAGTGGTGACTTTATGGTATCGGCCTCCTGAGCTCCTTCTTGGAGCCACTGAGTATGGCGTAGGAGTGGACCTCTGGAGTGCTGGCTGCATTCTTGCAGAATTGTTGGCTGGGAAACCTATCATGCCTGGTCGAACCGAGGTGGAGCAACTGCATAAGATATTTAAGCTATGTGGTTCTCCTTCTGAAGAATATTGGAAAAAGTCAAAGCTTCCACATGCTACTATTTTTAAACCACAACAATCATACAAGCGATGCATAGTCGAGACTTTTAAGAATTTTCCACCGTCATCCCTGCCACTGATCGAGACCCTTCTCGCAATTGATCCAGATGAACGGCTAACCGCCACTGCTGCATTGCATAGTGAATTCTTTATTACAAAGCCTTATGCCTGTGATCCATCTAGCCTTCCTAAATATCCTCCCAGCAAGGAGATGGATGCGAAACTACGCGACGAAGAAGCTAGAAGATTGAGAGCAGCTGGTAGATCGAATGCTGATGGTGTCAAGAAATCCCGCCCACGTGAGCGAGTAGGGAGAGGACTTCCCGGTCCCGACGCCAATGCCGAACTGCAAGCAAACATCGATAGACGGCGATTGATCACGCACGCCAATGCTAAAAGCAAGAGTGAAAAATTTCCACCTCCACACCAAGACGGAGCTCTAGGTTATCCTCTCGGCTCTTCTCAACACATGGATCCCATGTTCGATCCACCGGACGTTCCATTCAGTTCCACAAACTTGTCACTACCAAAAACAAACATCCATACATGGTCCGGCCCATTGATAGACCCTGGCAGCGTCGGTGCACCGAGGCGAAAGAAGAAACATGGCAGGAGAGATGAACAATGTGACATAGGACAAATCAAGCCATGA | 1653 | 0.4634 | MGCVFGKESLVEERREEVREEKVDVGGGGGEVENVKEGGEEKRVRHGGERRRRSSKANPRLSNPSNNVHGEQVAAGWPSWLSKVAGEAINGLVPRRADTFEKLDKIGQGTYSNVYKARDTLTGKIVALKKVRFDNLEPESVKFMAREILILRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMAHDLAGLATNPAIKFTEPQVKCYMHQLFSGLEHCHNRHVLHRDIKGSNLLIDNDGILKIADFGLASFFDPDHKHPMTSRVVTLWYRPPELLLGATEYGVGVDLWSAGCILAELLAGKPIMPGRTEVEQLHKIFKLCGSPSEEYWKKSKLPHATIFKPQQSYKRCIVETFKNFPPSSLPLIETLLAIDPDERLTATAALHSEFFITKPYACDPSSLPKYPPSKEMDAKLRDEEARRLRAAGRSNADGVKKSRPRERVGRGLPGPDANAELQANIDRRRLITHANAKSKSEKFPPPHQDGALGYPLGSSQHMDPMFDPPDVPFSSTNLSLPKTNIHTWSGPLIDPGSVGAPRRKKKHGRRDEQCDIGQIKP | 550 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi450g00005 | 550 | Gene3D | Phosphorylase Kinase; domain 1 | 88 | 182 | - | - | |
Vivi450g00005 | 550 | FunFam | probable serine/threonine-protein kinase At1g54610 | 87 | 182 | - | - | |
Vivi450g00005 | 550 | SMART | serkin_6 | 100 | 384 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi450g00005 | 550 | PANTHER | CELL DIVISION PROTEIN KINASE | 98 | 390 | - | - | |
Vivi450g00005 | 550 | MobiDBLite | consensus disorder prediction | 515 | 550 | - | - | |
Vivi450g00005 | 550 | MobiDBLite | consensus disorder prediction | 418 | 439 | - | - | |
Vivi450g00005 | 550 | Pfam | Protein kinase domain | 100 | 384 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi450g00005 | 550 | CDD | STKc_CDK9_like | 100 | 384 | - | - | |
Vivi450g00005 | 550 | MobiDBLite | consensus disorder prediction | 15 | 69 | - | - | |
Vivi450g00005 | 550 | MobiDBLite | consensus disorder prediction | 418 | 452 | - | - | |
Vivi450g00005 | 550 | Gene3D | Transferase(Phosphotransferase) domain 1 | 183 | 423 | - | - | |
Vivi450g00005 | 550 | MobiDBLite | consensus disorder prediction | 464 | 497 | - | - | |
Vivi450g00005 | 550 | ProSitePatterns | Protein kinases ATP-binding region signature. | 106 | 129 | IPR017441 | GO:0005524 | |
Vivi450g00005 | 550 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 220 | 232 | IPR008271 | GO:0004672|GO:0006468 | |
Vivi450g00005 | 550 | SUPERFAMILY | Protein kinase-like (PK-like) | 95 | 390 | IPR011009 | - | |
Vivi450g00005 | 550 | ProSiteProfiles | Protein kinase domain profile. | 100 | 384 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Vivi450g00005 | 550 | FunFam | probable serine/threonine-protein kinase At1g54610 | 183 | 424 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi450g00005 | 95 | 422 | Core Cell Cycle Gene Families | AT5G10270 | 52.035 | 3.28e-118 | 357 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | CMGC_CDK-CRK7-CDK9 | Vivi450g00005 | Pkinase | 4.1e-69 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi450g00005 | K08819 | - | vvo:131595530 | 999.964 |