Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi44g00071 ATGTATAGAGAGAATGGTCTTCTTTTCCCATGGCCATATCTAAACAATTTCTCTCAAGAGCTTCATCAACTTGAAGAGTACTGCAAAACTCAGAAGTTCAATGCTTCAATGAGTGACATTGTTCAGTTTTCTGCAATGTCTGAGTATGATTTTGCAGCTGAAGGAGATTTGTTCAAAGCTCCTGAACCAATTATTGAAGAGTCAGACATTGATCCGGATCTCATGACAGCAGCCATCTCAATGATATCTTGTGACGAAGATATAAAATCCACAGATATTTCTATTCTTCAAAATGAACAGCTTCTCAGCGATGTATTCTACGAATGTAAGAAGGATCTATTTGAAAAGACAGCGATGGAGTCACCACTGTCTGAGATTCTGGAAATTAAAATTCCACTACTAAACATCGATGAGAATGCAGTTCAAGAAAACAAGCCACTTCCTGATATGCCATTATTACCGAAGAGCGTTAGCTCAGGGAGTTTAAGTTCGATGGATTGGATTCATGGATCTGCAATGAAACCTGCTTTCCTTGGTGTCCCGGGAATAGATTTTGACGCGGTTTATGGTATGCGGAGATCATTTAGTGAAGGAGATATAAAGACTCTTGGCAACGGTAATAATATAAGCACAGTCCAATCTTCCCGAGAGAGGCCCTTTCTTTGCAACAGCGAGGAGCGCTTACAAAAGCACTCCCGATACAGGAACAAGAAGACGAAGAGGAATTTTGGGAGGAAAATCAAGTATGCTTGTAGGAAAGCTCTAGCTGACAGTCAACCAAGAATCCGTGGAAGATTTGCAAAGAATGAAGAATGTGAGGCAAAAAGGGAATGA 834 0.4041 MYRENGLLFPWPYLNNFSQELHQLEEYCKTQKFNASMSDIVQFSAMSEYDFAAEGDLFKAPEPIIEESDIDPDLMTAAISMISCDEDIKSTDISILQNEQLLSDVFYECKKDLFEKTAMESPLSEILEIKIPLLNIDENAVQENKPLPDMPLLPKSVSSGSLSSMDWIHGSAMKPAFLGVPGIDFDAVYGMRRSFSEGDIKTLGNGNNISTVQSSRERPFLCNSEERLQKHSRYRNKKTKRNFGRKIKYACRKALADSQPRIRGRFAKNEECEAKRE 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi44g00071 277 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 158 271 IPR045281 GO:0009909
Vivi44g00071 277 Pfam CCT motif 227 269 IPR010402 GO:0005515
Vivi44g00071 277 ProSiteProfiles CCT domain profile. 227 269 IPR010402 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi44g00071 204 273 C2C2-CO-like Transcription Factor Family AT5G57660 45.946 3.61e-09 55.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi44g00071 CCT 7.6e-16 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi44g00071 - - gmx:100814332 402.134