Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi44g00068 | ATGATTATCAAGCGGGAGTTGAAATCTCAAATGCCGCGTTTGAAACGGTGTAGACTCGGTGACTCGGTTGGAGAAGATGAAGACTGCTCTTATGCTTCTAAGAAGAGGAAGACGAGCGGTTATTATTATCCTTTGAATCTTTTAGGTGATGTTGCTGCCGGTTTGATTCCGGCGAGTTTTCACGGTTTGTTGAGTGCTGGTGTATCCGAGAGGTCGTGGTGCACTCAAGTTCCGTGCTCCCCCGGTGAGGTTGAGTCGAAGGAGGAGGTGGTTCCGGTGAAGAAAAGTCAGGTTCAGCGACCGCCGCTGGTTCGAACTTCGAGAGGGCGAGTTCAGGTTCTTCCTTCTCGTTTTAATGACTCTGTTATTGATAATTGGAAGAAAGATGGGAAAACCACCTCTCGTGATTGTGAAGTTGAAGGTGAATTTGAATGCAAGAAGGACAAGGTAGTAACCAAAACTTGCAATAACAATGTTAGGAAAGGGCGTAACAGTGGGAAAATTTGTTATAAGCAGCGCAAGTATTCGGCATTGTGTGAGGACGAAGATTTTACCGTGAGTGGGAGGCGTAAGAGTTTTGGTAGAAGGAAGGATTCAGCTTTGGATGATGATGAAGATGATTTGGGGATGGGTGGGGATGAAATAGTTGGTTTGAAGGAGAATAGTGAAGAGAAGAAAGATGGGTTATATGGGCCAGAAGATTTTTATGCCTGTGATATAGTGTGGGCCAAAGCTGGGAGGAAGGAACCTCTTTGGCCAGCTGTTGTTATTGATCCTACGAAACAAGCACCTGAGTTGGTCCTAAGGTCTTTTATAGCCGATGCTGCATGTGTCATGTTTCTTGGTAATGCTGGGAATGAAAATCAAAGGGACTATGCATGGGTGAAGCATGGCATGATCTTTCCATTTATGGATTATGTTGACAGGTTTCAAGAGCAGCCTGAGTTGAGTAACTATAGTCCCTCTGACTTCCAAATGGCAATAGAGGAGGCATTTTTGGCTGACCAAGGCTTTACAGAGAAGTTGATAGATGATATAAATGCAGCAGCTTGTGCTACTGTTTATGATGATAATATTCTGAAATCCTCCTTCCGGGAGATCTGTGGTTCAAACCAGTATGGAAGAGCAGGAAAGCATTTTCTGAACCAGGATTTATGTGAAGCGTGTGGATTGACACTTTCTTACAAGATGTCAAAGAAAACGAATGGTTTGACTCCTAATGGTCAACTCCTATGTAAGACATGTGCAAGGTTAACGAAATCAAAACATTACTGTGGCATATGCAAGAAAGTTTGGAATCATTCGGATAGTGGAAGCTGGGTGCGCTGTGATGGATGTAAAGTGTGGGTGCATGCCGAATGTGACCAGATTTCTAGAAACCATTTCAAGGATCTTGAAAGCACCGATTATTACTGCCCCACATGTAGAGGCAAGTTTGACTTTGAGTTATCTGATTCAGAAAAATCGAAGACAAAAGTCAGATCAAACCGAAACAATGGGCAGCTTGTGCCTTCAAATAAGGTGACTGTTCTCTGCAATGGTGTGCAAGGCATATATTTTCCAAGCCTACACTTAGTTGTGTGCAAGTGTGGTTTTTGTGGGACAGAAAAGCAAGCTCTTAGCGAATGGGAACGGCACACCGGTTCCAAATTAAGAAATTGGAAAACAAGTATTACTGTGAAAGACTCTAGGCTACCTTTGGAACAATGGATGCTGCAGGTTGCCGAAGTTCATGCTAATGCTCTAGTTTCTGTCAAACCTAAAAAACCTTCTTTAAAAGAAAGGAAGCAGAAGTTGCTTACCTTCTTGAAAGAGAGGTATGAACCTGTTTATGCTAAGTGGACTACAGAGCGTTGTGCTGTTTGCAGATGGGTTGAAGACTGGGACTACAATAAAATCATCATATGCAACAGATGTCAAATAGCTGTTCACCAAGAATGCTATGGAGTATTAAATGTTAAAGACTTTACATCTTGGGTCTGTAAGACCTGCGAGACACCTAAAATCAAGCGGGAGTGTTGTCTTTGTCCTGTAAAAGGTGGTGCTCTAAAGCCAACAGATATTGACACATTATGGGTTCATGTCACCTGTGCTTGGTTTCGACCTGAAGTCTCGTTTGCTAGTGATGAGAAAATGGAACCTGCTTTGGGCATTCTAAGTATTCCATCAAATTCTTTTGTGAAGATTTGTGTTATTTGCAAGCAAATTCATGGTTCCTGCACACAGTGCTGCAAATGCTCCACTTATTTCCATGCCATGTGTGCATCAAGGGCTGGTTACCGAATGGAATTGCATTGTTCGAAGAAAAATGGGAAGACAATAACAAAAATGGTTTCATATTGTGCTTACCACAGAGCTCCAAATCCTGACAATGTTTTGATTTTGCAAACCCCTCTTGGGGTCATTTCAACCAAAAGCCTTCTTCAAAAGAAAAAAATTGGATCAAGGTTAATCTCATCTAACAGAATAAAGCAAGAAGAGACTCCTATTGATATCACTGAGCATGACCCCTTCTCTGCTGCTCGGTGTCGTATCTTTAAAAGAACAAATCATACCAGAAAGAGAGCTTCTGGTGAAGCAGTTTTTCATCAAGCGAGGGGTCACTGCCACCACCCTTTGGATGCGATACAGAGTTTAAATGCATACCGAACAGTGAAGGAGCCTCCATCTTTCTCTTCTTTCAGAGAACGACTTTACCACTTACAGAGTACCGAAAATGAACGGGTTTGCTTTGGTAGATCTGGCATACATGGATGGGGCCTCTTTGCACGTAGAAATATTCAAGAAGGAGAAATGGTTCTTGAATATCGCGGGGAACAAGTGAGACGCAGCATTGCTGATTTGAGGGAGGCACGCTATAGAGCAGAAGGGAAAGACTGCTACCTGTTTAAGATAAGCGAAGAAGTGGTGGTAGATGCCACTGATAAAGGGAATATAGCACGACTAATCAACCATTCTTGCATGCCAAATTGCTATGCAAGGATCATGAGTGTGGGAGATGACGAGAGCCGGATTGTACTCATTGCTAAAACCAACGTATCTTTTGGTGACGAGTTAACTTATGACTACTTATTTGATCCTGACGAGCCAGATGAATTTAAAGTCCCCTGCATGTGTAAAGCTTCGAGTTGCAGGAAATTCATGAATTAG | 3150 | 0.4263 | MIIKRELKSQMPRLKRCRLGDSVGEDEDCSYASKKRKTSGYYYPLNLLGDVAAGLIPASFHGLLSAGVSERSWCTQVPCSPGEVESKEEVVPVKKSQVQRPPLVRTSRGRVQVLPSRFNDSVIDNWKKDGKTTSRDCEVEGEFECKKDKVVTKTCNNNVRKGRNSGKICYKQRKYSALCEDEDFTVSGRRKSFGRRKDSALDDDEDDLGMGGDEIVGLKENSEEKKDGLYGPEDFYACDIVWAKAGRKEPLWPAVVIDPTKQAPELVLRSFIADAACVMFLGNAGNENQRDYAWVKHGMIFPFMDYVDRFQEQPELSNYSPSDFQMAIEEAFLADQGFTEKLIDDINAAACATVYDDNILKSSFREICGSNQYGRAGKHFLNQDLCEACGLTLSYKMSKKTNGLTPNGQLLCKTCARLTKSKHYCGICKKVWNHSDSGSWVRCDGCKVWVHAECDQISRNHFKDLESTDYYCPTCRGKFDFELSDSEKSKTKVRSNRNNGQLVPSNKVTVLCNGVQGIYFPSLHLVVCKCGFCGTEKQALSEWERHTGSKLRNWKTSITVKDSRLPLEQWMLQVAEVHANALVSVKPKKPSLKERKQKLLTFLKERYEPVYAKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGVLNVKDFTSWVCKTCETPKIKRECCLCPVKGGALKPTDIDTLWVHVTCAWFRPEVSFASDEKMEPALGILSIPSNSFVKICVICKQIHGSCTQCCKCSTYFHAMCASRAGYRMELHCSKKNGKTITKMVSYCAYHRAPNPDNVLILQTPLGVISTKSLLQKKKIGSRLISSNRIKQEETPIDITEHDPFSAARCRIFKRTNHTRKRASGEAVFHQARGHCHHPLDAIQSLNAYRTVKEPPSFSSFRERLYHLQSTENERVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRRSIADLREARYRAEGKDCYLFKISEEVVVDATDKGNIARLINHSCMPNCYARIMSVGDDESRIVLIAKTNVSFGDELTYDYLFDPDEPDEFKVPCMCKASSCRKFMN | 1049 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi44g00068 | 1049 | Pfam | PHD-finger | 424 | 476 | IPR019787 | - | |
Vivi44g00068 | 1049 | Gene3D | - | 232 | 338 | - | - | |
Vivi44g00068 | 1049 | ProSiteProfiles | Zinc finger PHD-type profile. | 422 | 478 | IPR019787 | - | |
Vivi44g00068 | 1049 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 611 | 667 | IPR013083 | - | |
Vivi44g00068 | 1049 | Gene3D | SET domain | 809 | 1049 | IPR046341 | - | |
Vivi44g00068 | 1049 | SUPERFAMILY | FYVE/PHD zinc finger | 617 | 681 | IPR011011 | - | |
Vivi44g00068 | 1049 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 668 | 787 | IPR013083 | - | |
Vivi44g00068 | 1049 | FunFam | Histone-lysine N-methyltransferase | 882 | 1049 | - | - | |
Vivi44g00068 | 1049 | CDD | SET_SETD1-like | 894 | 1045 | - | - | |
Vivi44g00068 | 1049 | Pfam | SET domain | 918 | 1023 | IPR001214 | GO:0005515 | |
Vivi44g00068 | 1049 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 419 | 479 | IPR013083 | - | |
Vivi44g00068 | 1049 | ProSitePatterns | Zinc finger PHD-type signature. | 619 | 664 | IPR019786 | - | |
Vivi44g00068 | 1049 | SUPERFAMILY | SET domain | 901 | 1046 | IPR046341 | - | |
Vivi44g00068 | 1049 | SUPERFAMILY | Tudor/PWWP/MBT | 230 | 334 | - | - | |
Vivi44g00068 | 1049 | ProSiteProfiles | Zinc finger PHD-type profile. | 616 | 667 | IPR019787 | - | |
Vivi44g00068 | 1049 | FunFam | Histone-lysine N-methyltransferase | 668 | 787 | - | - | |
Vivi44g00068 | 1049 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 3 | 1049 | IPR025780 | - | |
Vivi44g00068 | 1049 | CDD | PHD_ATX3_4_5_like | 618 | 664 | IPR042011 | - | |
Vivi44g00068 | 1049 | SMART | set_7 | 907 | 1030 | IPR001214 | GO:0005515 | |
Vivi44g00068 | 1049 | PANTHER | PHD FINGER PROTEINS | 65 | 512 | - | - | |
Vivi44g00068 | 1049 | SMART | PHD_3 | 729 | 785 | IPR001965 | - | |
Vivi44g00068 | 1049 | SMART | PHD_3 | 424 | 476 | IPR001965 | - | |
Vivi44g00068 | 1049 | SMART | PHD_3 | 618 | 665 | IPR001965 | - | |
Vivi44g00068 | 1049 | ProSiteProfiles | Post-SET domain profile. | 1033 | 1049 | IPR003616 | - | |
Vivi44g00068 | 1049 | Pfam | PHD-finger | 631 | 665 | - | - | |
Vivi44g00068 | 1049 | ProSiteProfiles | SET domain profile. | 907 | 1024 | IPR001214 | GO:0005515 | |
Vivi44g00068 | 1049 | Pfam | PWWP domain | 239 | 331 | IPR000313 | - | |
Vivi44g00068 | 1049 | ProSiteProfiles | Extended PHD (ePHD) domain profile. | 670 | 785 | IPR034732 | - | |
Vivi44g00068 | 1049 | CDD | ePHD_ATX3_4_5_like | 673 | 784 | IPR041955 | - | |
Vivi44g00068 | 1049 | CDD | PWWP_AtATX3-like | 239 | 340 | - | - | |
Vivi44g00068 | 1049 | SUPERFAMILY | FYVE/PHD zinc finger | 423 | 479 | IPR011011 | - | |
Vivi44g00068 | 1049 | Pfam | PHD-zinc-finger like domain | 672 | 784 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi44g00068 | 619 | 784 | C2H2 Transcription Factor Family | AT3G14740 | 34.682 | 1.16e-21 | 95.9 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | PHD | Vivi44g00068 | zf-HC5HC2H_2 | 6.1e-27 | CL0390 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi44g00068 | - | - | aprc:113853254 | 1709.5 |