LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi44g00065	ATGGCACTGTGTAGAACTGGGCCATACCCAATTATGGAGAGTAATAGCCTAGCTTATTCGCATAGAAATTTGTTTGTTTTACCCGTTCCTCTGCATTTCGCTAGACATAGACAATCATCTAATGAAGGCAAGAGAAAGCACAAAGGAGTATGCAGTTCATCATTACATGGAGCTGCATCTCCTTCTTCCATGGAATCACATGAAGAGGATCTCAGCGCCTTTTCCGTTTGCTTGGAGGAGGAAACTGATCATGTTGTGAGGTTCAAAATGTCGGATTTTAAGGTTTTAGATCATGTTAGCATTGGCCTCGGTGGAAGGGCAGATGAGGTGGTTTTTGAAGGGGAGGTGAAGGATAGTGGTAGCCCTTTGTATAACACACGAGTCATACTTAGACAGCTTTATAGTACCCAAGCTCAGCGTCGAGGAAAACGAGCAATAGAGGTGTTGAAGAAGCTGGTTCGCCGTAAACTTTTATATCATTCTTACTCAATGCAAGTTCTTGGGTATATCTCTTTGCCTGCAAGTGATGATAGTGGTTCATTCATCCTAGTACATGGGTATCATGGTAGTTTTTCTTTGAGACACTGGCTTCAACAGTCAGATTGGCTTCAAACTTTAGAGGCCACTCTTGCATTGGACGAAGAGTCTGTTAGGAAGGTAGGAGAAGACACAACTGGAGGTCCTGCAATTTCTAGGCAATTGCGTCTTATTCGAATGTTGATGAGAGATCTTCTAATTGGAGTAAATTACCTGCATAGTCATGGTCTTGCCCATACAGAGTTGAGGCTGGAAAATGTGCATATAAGCCCAATAGATCGACATATCAAAGTAGGTATTCTGGGAAATGCTGCTGACTTTTGCGAGGATGGTTCAAATAGTGGCTCAATGGAAAACATGGACAGGCGACAAATGATGATTGCATTTGACATGAGATGTGTGGGTTTCATAATGGCAAAAATGGTAATGGGAGAACTTATGGATCCTTTGATCTTTGCAAAGTTCAAATCGTTCCTCACAAAGGGGAATGATCCTTCTTGTTTGCGACAGCTTATGCTGGAAATCCTTGGTAGAAATTCTCCATATGGAAATGCTGGCTTACAAATGCTTGATAGGAACTGGGGTGCTGGTTGGCACCTTTTATCTTTATTGCTTGCAACCAAACCTTCTGAGAGGATAAGTTGTTTGGATGCTCTAAGGCACCCATTCCTTTGTGGGCCAAGATGGCGAGTAGTCCCATCAATGGATATTATCAGATGGGGTCTGGGTTGTACTGCAATGCGTATTAGTGAGGAGTACATTTATCGTCAGCCTCAGCGCAGTAGGCTTGCCCACTTCATTGACTTGTTGGAGATGTTGAATCCTAATCCAAAGCCAAAGAATTGGCTGGAGCTGCTTCCAGGCAAATGGCGTCTATTGTACTGCACTGGGAAGCATGTTGGGCTGACTCTTCGACAACCTACAGTCCGTGTACTAGTTGGAGATTTGCATTTAACTGTTAAAAGAGAATCAATGTTGAAGTCAAACCTTTCCTTCGTCACTGACATTGGATTCAGAGTCATGATTGGTCAGGACTGGCCTCATGACAAAGCTGGTAAAAGAGGAAGAGTGCAGGTGAGCTCTTCATTCACACTAAGAGCTGGGAGACGGTTATATCTGAAGCAAGACAATATCTCTGAGAAGCTCTCCTTTGGCCCTTCCGGCAATGAGGAGGCTTTAGCTCAGAAATTTACTAGCAAGAAATGGAGAAAAATAACTCCTTTCAAGGAGTTTCCATCAAGTCTCCCTGCAGCCAAGCTTGCATCGGGTGATCTTGATGTGACAATGAATCTTGACGATCCTTTAAATCAAAACATTGATACAGCAAAAAATGTTCTTCAAGAACTAAGAACACAAATCCCCCCTGAATTATTTGATCTGTCAAAGGTTGTGTGTGGAACTTATGTGGACTCAAGGCTGCTAATTCTTCGAGGGGTTAATGGATCAGCTCTCCTATTTACAAGGTCTTTTGTGGATACTGACAGTTCTAGCTAA	2031	0.4289	MALCRTGPYPIMESNSLAYSHRNLFVLPVPLHFARHRQSSNEGKRKHKGVCSSSLHGAASPSSMESHEEDLSAFSVCLEEETDHVVRFKMSDFKVLDHVSIGLGGRADEVVFEGEVKDSGSPLYNTRVILRQLYSTQAQRRGKRAIEVLKKLVRRKLLYHSYSMQVLGYISLPASDDSGSFILVHGYHGSFSLRHWLQQSDWLQTLEATLALDEESVRKVGEDTTGGPAISRQLRLIRMLMRDLLIGVNYLHSHGLAHTELRLENVHISPIDRHIKVGILGNAADFCEDGSNSGSMENMDRRQMMIAFDMRCVGFIMAKMVMGELMDPLIFAKFKSFLTKGNDPSCLRQLMLEILGRNSPYGNAGLQMLDRNWGAGWHLLSLLLATKPSERISCLDALRHPFLCGPRWRVVPSMDIIRWGLGCTAMRISEEYIYRQPQRSRLAHFIDLLEMLNPNPKPKNWLELLPGKWRLLYCTGKHVGLTLRQPTVRVLVGDLHLTVKRESMLKSNLSFVTDIGFRVMIGQDWPHDKAGKRGRVQVSSSFTLRAGRRLYLKQDNISEKLSFGPSGNEEALAQKFTSKKWRKITPFKEFPSSLPAAKLASGDLDVTMNLDDPLNQNIDTAKNVLQELRTQIPPELFDLSKVVCGTYVDSRLLILRGVNGSALLFTRSFVDTDSSS	676

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi44g00065	676	Pfam	PAP_fibrillin	438	664	IPR006843	-
	Vivi44g00065	676	ProSiteProfiles	Protein kinase domain profile.	93	403	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi44g00065	676	PANTHER	SERINE/THREONINE-PROTEIN KINASE STN8, CHLOROPLASTIC-RELATED	401	649	-	-
	Vivi44g00065	676	SMART	serkin_6	93	403	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Vivi44g00065	676	SUPERFAMILY	Protein kinase-like (PK-like)	88	415	IPR011009	-
	Vivi44g00065	676	MobiDBLite	consensus disorder prediction	37	64	-	-
	Vivi44g00065	676	Gene3D	Transferase(Phosphotransferase) domain 1	229	405	-	-

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-4	Vivi44g00065		PAP_fibrillin	3.2e-07	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi44g00065	-		-	gmx:100809306	1097.42