Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi44g00046 ATGAAACATATGCTTTTCCTACTTGTCACTTTCAAGATTATAAAAAAGAAGTTGACAAAGCTACGAGAGAGAATGGGGTTTCAAACAACACACAACACTATGAAATCAAAAGATGACTCAAACAACACTCATGGACAACAACACTCTTTAATTCCAAGGGCACTCAACTTGACTCATCATACATTAACCACAAATAATACCAAATTCATTCACTCTGGCTATGATTCATGGCTGGTAACACACCCTTCAGCATTGAGCTCATTCGATAGATTGATGAAAGGTGTCAATGGAAAAAGGATCGTCGTATTTTTAGATTATGACGGTACCTTATCACCCATTGTAAATAACCCTGATCGCGCTTTCATGTCTGATGAGATGCGTGCAGCAGTATCTGAAGTTGCTACTTATTTTCCAACAGCAATAATTACTGGAAGAGGCAGGGAAAAAGTAAAAGATTTTGTGAAGTTAAATAATTTATATTATGCTGGAAGTCATGGTATGGACATAATGGCACCATCAGTGCCAATTAACCAATGTGACAACACTACTCTTCACACAAATGGCAATGGAGTTCCCTTTCAACCTGCCAAGAAATTCTTGCCAGCAATTCAAGAGATATTAAAAAGATTAGAGGATGTAATAAAGGGCATAGAAGGTGCAAGTATAGAAGACAACCAATTCTGTATCACTGTACATTTTCGGCAAGTTCACGAAAAGGATTATAATGTTTTGGAAGAGAAAGTGAAGTCTGTGCTTGCAAAATATCCATTGTTCTGCATGAATGAGGGTAAAAAGGTTATGGAAATAAGACCATCAATAAAATGGAACAAAGGAAATGCTATAGAGTATTTTTTAGACACATTGGGATTAAGCAATTCCAACAATTTTATTCCTTTGTATATTGGAGATGATAGAACTGATGAAGATGCATTTAAGGTTCTACGAAGTAGAGGGCAAGGTTATCCGATTATAGTGTCTTCAACTCCAAGAGAAACATGTGCTTTGTACTCTTTGCGTGATCCGTCAGAAGTACTAATCTTCTTGTCAAGGCTAGCAAAATGGAGGAAGAGATTTTAA 1077 0.3649 MKHMLFLLVTFKIIKKKLTKLRERMGFQTTHNTMKSKDDSNNTHGQQHSLIPRALNLTHHTLTTNNTKFIHSGYDSWLVTHPSALSSFDRLMKGVNGKRIVVFLDYDGTLSPIVNNPDRAFMSDEMRAAVSEVATYFPTAIITGRGREKVKDFVKLNNLYYAGSHGMDIMAPSVPINQCDNTTLHTNGNGVPFQPAKKFLPAIQEILKRLEDVIKGIEGASIEDNQFCITVHFRQVHEKDYNVLEEKVKSVLAKYPLFCMNEGKKVMEIRPSIKWNKGNAIEYFLDTLGLSNSNNFIPLYIGDDRTDEDAFKVLRSRGQGYPIIVSSTPRETCALYSLRDPSEVLIFLSRLAKWRKRF 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi44g00046 358 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 44 356 IPR044651 GO:0004805|GO:0005992
Vivi44g00046 358 Gene3D - 191 358 IPR023214 -
Vivi44g00046 358 Gene3D - 100 178 IPR023214 -
Vivi44g00046 358 FunFam Trehalose 6-phosphate phosphatase 201 357 - -
Vivi44g00046 358 NCBIfam trehalose-phosphatase 97 353 IPR003337 GO:0003824|GO:0005992
Vivi44g00046 358 CDD HAD_TPP 101 344 - -
Vivi44g00046 358 FunFam Trehalose 6-phosphate phosphatase 196 272 - -
Vivi44g00046 358 Pfam Trehalose-phosphatase 103 342 IPR003337 GO:0003824|GO:0005992
Vivi44g00046 358 NCBIfam HAD-IIB family hydrolase 102 316 IPR006379 -
Vivi44g00046 358 SUPERFAMILY HAD-like 101 355 IPR036412 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi44g00046 96 352 Trehalose Biosynthesis Gene Families AT1G23870 25.818 3.25e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi44g00046 K01087 - gmx:100809194 494.197