Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi44g00035 ATGGGAGATTCAAAGAGTTTGATACATGAGTTACTTCAAGGATTGGAGTTAGCAAGAAAGCTTAGAATTTATCTCAACGTATCTTCTTCTTCTTCTCCCTCCGTTCATGAAACACGTGAAGTTTTGATACATAAAATCATATCCACGTTCGAAAAGGCTCTTGAAATTGTTAACCGTAAAGGACACATTAGTATGGCCGAATCATCACAACAGCAACAACAACATCACCCTTCGGTCTCAGGAGCACTTGCCATAAGAATGTTGGATTCACCACCTTTAAGCTCTAGTCCACGAAGTGAAGACTCTGATAGAGATTTTAAGAACCGTGATGATCACAATACTCCTAGAAAAAGGTACGTAAATCTATCATTTTTCATTTTTCATGTGTATGATCTTACTTACAGTAACTATCATTTTTCATGTTATAGAAACACTCTACCAATTAGATGGACAAAACAAATTCGAGTTACACCAGGAATAGCAGTCGAAGGTCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAAAAAGACATCCTCGGAGCCACACACCCTAGAGGTTATTACAGATGCACTCACAGAAACATTCAAGGTTGTTTGGCAACAAAGCAAGTACAAAGATCCGACGAAGATCCAACCATCTTCGAAATCACTTACAAAGGAAACCACACATGCACAAACGGAAGCACTTCCAATGTGGCTGTTCCAATTCCAACCATGAACCCAAATGAATATCAAGAAACAAATATAATCACAAACCAACAACTAACAAACCTGCGAACAGGTCTAAGAGTTCAGACAGAGAATCTAGATTTCCTCGACCAATCATTTGCGCCATTAATCCATTTCCATTCAAGCCATGTACTTGAAAGTAGCTTTGCTGAAAACTTCAACTCCCCTGCAACTTCTGGAATAAGTCACTTCTCGATGTCGCCGCCGAGCGTGTTCCCGAATATGGCTAGTGAGATTTTTCCATCAGCTACTTCTGTTGCAAACACACCAACCACTGGTTTAGATTTTCCGTTTCAATTCGACGGAGAGAACTTCACATTCGATAACTCGCAGTTTTTCCCTTGA 1080 0.3981 MGDSKSLIHELLQGLELARKLRIYLNVSSSSSPSVHETREVLIHKIISTFEKALEIVNRKGHISMAESSQQQQQHHPSVSGALAIRMLDSPPLSSSPRSEDSDRDFKNRDDHNTPRKRYVNLSFFIFHVYDLTYSNYHFSCYRNTLPIRWTKQIRVTPGIAVEGPLDDGYSWRKYGQKDILGATHPRGYYRCTHRNIQGCLATKQVQRSDEDPTIFEITYKGNHTCTNGSTSNVAVPIPTMNPNEYQETNIITNQQLTNLRTGLRVQTENLDFLDQSFAPLIHFHSSHVLESSFAENFNSPATSGISHFSMSPPSVFPNMASEIFPSATSVANTPTTGLDFPFQFDGENFTFDNSQFFP 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi44g00035 359 Gene3D WRKY domain 159 228 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi44g00035 359 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 258 IPR044810 GO:0003700
Vivi44g00035 359 MobiDBLite consensus disorder prediction 91 112 - -
Vivi44g00035 359 Pfam WRKY DNA -binding domain 167 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi44g00035 359 SUPERFAMILY WRKY DNA-binding domain 164 227 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi44g00035 359 FunFam WRKY transcription factor 53 152 229 - -
Vivi44g00035 359 ProSiteProfiles WRKY domain profile. 161 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi44g00035 359 SMART WRKY_cls 166 228 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi44g00035 359 MobiDBLite consensus disorder prediction 98 112 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi44g00035 3 272 WRKY Transcription Factor Family AT4G23810 36.111 1.57e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi44g00035 WRKY 2.6e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi44g00035 - - vvo:131622548 704.516