Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi44g00034 ATGGGAGATTCAAAGAGTTTGATACATGAGTTACTTCAAGGATTGGAGTTAGCAAGAAAGCTTAGAATTTATCTCAACGTATCTTCTTCTTCTTCTCCCTCCGTTCATGAAACACGTGAAGTTTTGATACATAAAATCATATCCACGTTCGAAAAGGCTCTTGAAATTGTTAACCGTAAAGGACACATTAGTATGGCCGAATCATCACAACAGCAACAACAACATCACCCTTCGGTCTCAGGAGCACTTGCCATAAGAATGTTGGATTCACCACCTTTAAGCTCTAGTCCACGAAGTGAAGACTCTGATAGAGATTTTAAGAACCGTGATGATCACAATACTCCTAGAAAAAGAAACACTCTACCAATTAGATGGACAAAACAAATTCGAGTTACACCAGGAATAGCAGTCGAAGGTCCTCTTGATGATGGATATAGTTGGAGAAAATATGGCCAAAAAGACATCCTCGGAGCCACACACCCTAGAGGTTATTACAGATGCACTCACAGAAACATTCAAGGTTGTTTGGCAACAAAGCAAGTACAAAGATCCGACGAAGATCCAACCATCTTCGAAATCACTTACAAAGGAAACCACACATGCACAAACGGAAGCACTTCCAATGTGGCTGTTCCAATTCCAACCATGAACCCAAATGAATATCAAGAAACAAATATAATCACAAACCAACAACTAACAAACCTGCGAACAGGTCTAAGAGTTCAGACAGAGAATCTAGATTTCCTCGACCAATCATTTGCGCCATTAATCCATTTCCATTCAAGCCATGTACTTGAAAGTAGCTTTGCTGAAAACTTCAACTCCCCTGCAACTTCTGGAATAAGTCACTTCTCGATGTCGCCGCCGAGCGTGTTCCCGAATATGGCTAGTGAGATTTTTCCATCAGCTACTTCTGTTGCAAACACACCAACCACTGGTTTAGATTTTCCGTTTCAATTCGACGGAGAGAACTTCACATTCGATAACTCGCAGTTTTTCCCTTGA 1005 0.409 MGDSKSLIHELLQGLELARKLRIYLNVSSSSSPSVHETREVLIHKIISTFEKALEIVNRKGHISMAESSQQQQQHHPSVSGALAIRMLDSPPLSSSPRSEDSDRDFKNRDDHNTPRKRNTLPIRWTKQIRVTPGIAVEGPLDDGYSWRKYGQKDILGATHPRGYYRCTHRNIQGCLATKQVQRSDEDPTIFEITYKGNHTCTNGSTSNVAVPIPTMNPNEYQETNIITNQQLTNLRTGLRVQTENLDFLDQSFAPLIHFHSSHVLESSFAENFNSPATSGISHFSMSPPSVFPNMASEIFPSATSVANTPTTGLDFPFQFDGENFTFDNSQFFP 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi44g00034 334 Gene3D WRKY domain 134 203 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi44g00034 334 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 3 233 IPR044810 GO:0003700
Vivi44g00034 334 Pfam WRKY DNA -binding domain 142 201 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi44g00034 334 SMART WRKY_cls 141 203 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi44g00034 334 MobiDBLite consensus disorder prediction 89 124 - -
Vivi44g00034 334 ProSiteProfiles WRKY domain profile. 136 199 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi44g00034 334 FunFam WRKY transcription factor 53 127 204 - -
Vivi44g00034 334 SUPERFAMILY WRKY DNA-binding domain 139 202 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi44g00034 334 MobiDBLite consensus disorder prediction 98 118 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi44g00034 3 247 WRKY Transcription Factor Family AT4G23810 37.175 6.45e-47 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi44g00034 WRKY 2.4e-27 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi44g00034 - - vvo:131622548 635.18