Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi44g00024 ATGGACAAGAAGCTATCTCTCTTGTTCATGTTTTCAGTAGTGTTTGTTAGTGTTGGAGCTGAACCAGTGGAAGATAAACAAGCTTTACTTGATTTTCTTCATAAGATGAGTCATTCTCCACATGTCAATTGGGATGAGAATTCTTCTGTATGCCAAACATGGAGAGGAGTTACCTGCAACGCCGACCAAACTCGAGTTATCGCGATTCGGTTACCTGGAGCTGGATTAAGAGGTCCAATTCCGCCGAACACGCTCAGTCGCCTCGCGGCGATTGAGACAGTGAGTCTTAGATCAAATGGTATCACTGGTTTTTTTCCTGGTGGATTCTCTGAGCTGAAGAACTTGACTAGTCTTTATCTTCAGTCTAACAAATTTTCTGGGCCATTGCCATTGGATTTTTCTGTTTGGAATAATCTTACTGTTGTCAATTTGTCCAACAATTTTTTCAATGGTAGCATCCCTTTTTCAGTTGCAAATCTGACTCATCTCAGTTCATTAGTCCTTGCAAACAACTCTCTTTCTGGCGAGATTCCTGATATCGGTATTCATAGCCTTCGAGAGCTAAATTTAGCAAACAATGACCTTAGTGGTGTTGTGCCAAAATCACTTCTTAGATTTCCAAGTTGGGCTTTTTCTGGTAACAATCTTACATCGGTTAATAATAGTTCGCATCCTCCGGCTTTGCCTATGCATCCACCTTATACTCTTCCACATAAGAAAACCAAAGGACTAAGTGAAACTGCGTTATTGGGAATCATCATCGGTGTTTGTGCACTTGGATTCGCGGTGATTGCAGTTGTTATGATTCTGTGCTGCTACGACTTTGCTGCTGCAGGTGTAAAAGAATCTGTGAAATCGAAGAAAAAAGAAGTCTCAACGAAAGCAGAAACTTCTGCGAGCCGAGATAAAAACAAGATAGTATTTTTCGAGGATTGCAATCTCGCGTTTGATCTAGAGGATCTTTTGAGAGCTTCTGCTGAGATTCTCGGAAAGGGAACTTTTGGTACAACATATAAAGCTGCTTTAGAGGATGCAAGCACTGTGGTGGTGAAGAGGTTGAAAGAGGTTACTGTTGGGAAAAAGGAGTTTGAACAACACATGGAAGTTGTAGGGAAGCTTAAGCATGAAAATGTGGATGCAATAAGAGCTTATTACTATTCAAAGGATGAGAAGCTAGTTGTATTTGATTATTATCAACAAGGAAGTGTTTCTTCCATTTTACATGGTAACCGAGCGGAAGGACGAGCTTCTCTAGACTGGGATAGCCGTTTAAGAATCGCGATTGGAACCGCGAGAGGAATTGCTCACATCCATGTTCAACAAGGAGGGAAACTAGTTCATGGAAACATAAAAGCTTCAAACATCTTCGTCAATTCACAAGGATACGGTTGTGTATCTGACATAGGTTTAGCAACATTGATGAGTTCAATACCTTCACCAGGGACAAGAGCATCAGGATACCGTGCGCCAGAAGTAACAGACACGCGTAAAGCAACGCATTCGTCTGATGTATACAGTTTTGGTGTCCTGCTACTCGAGCTTCTAACTGGAAAATCGCCGATATATTCAGCAGAAGGCGAACAAATTGTTCACTTGGTTAGATGGGTGAATTCGGTTGTGAGAGAGGAATGGACTGCTGAAGTTTTCGACGTGGAGCTTTTGAGGTATTCGAATATAGAAGAAGAAATGGTGGAGATGCTACAGATAGGGATGGCTTGTGCTGCAAGAATGCCAGATCAGAGACCAAAAATGCCTGAAGTGGTGAGAATGATGGAAGGGATTCGTCCAGAAAATCGACCATCGTCTACCGAATCTAGATCAGAAGTTTCAACTCCAACTGTTTATGCAACTTAA 1854 0.418 MDKKLSLLFMFSVVFVSVGAEPVEDKQALLDFLHKMSHSPHVNWDENSSVCQTWRGVTCNADQTRVIAIRLPGAGLRGPIPPNTLSRLAAIETVSLRSNGITGFFPGGFSELKNLTSLYLQSNKFSGPLPLDFSVWNNLTVVNLSNNFFNGSIPFSVANLTHLSSLVLANNSLSGEIPDIGIHSLRELNLANNDLSGVVPKSLLRFPSWAFSGNNLTSVNNSSHPPALPMHPPYTLPHKKTKGLSETALLGIIIGVCALGFAVIAVVMILCCYDFAAAGVKESVKSKKKEVSTKAETSASRDKNKIVFFEDCNLAFDLEDLLRASAEILGKGTFGTTYKAALEDASTVVVKRLKEVTVGKKEFEQHMEVVGKLKHENVDAIRAYYYSKDEKLVVFDYYQQGSVSSILHGNRAEGRASLDWDSRLRIAIGTARGIAHIHVQQGGKLVHGNIKASNIFVNSQGYGCVSDIGLATLMSSIPSPGTRASGYRAPEVTDTRKATHSSDVYSFGVLLLELLTGKSPIYSAEGEQIVHLVRWVNSVVREEWTAEVFDVELLRYSNIEEEMVEMLQIGMACAARMPDQRPKMPEVVRMMEGIRPENRPSSTESRSEVSTPTVYAT 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi44g00024 617 Pfam Leucine rich repeat 80 125 IPR001611 GO:0005515
Vivi44g00024 617 Pfam Leucine rich repeat N-terminal domain 24 60 IPR013210 -
Vivi44g00024 617 Pfam Leucine Rich Repeat 184 211 IPR001611 GO:0005515
Vivi44g00024 617 Pfam Protein kinase domain 326 589 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi44g00024 617 MobiDBLite consensus disorder prediction 598 617 - -
Vivi44g00024 617 Gene3D Phosphorylase Kinase; domain 1 287 397 - -
Vivi44g00024 617 Gene3D Transferase(Phosphotransferase) domain 1 399 614 - -
Vivi44g00024 617 FunFam pollen receptor-like kinase 1 292 397 - -
Vivi44g00024 617 SUPERFAMILY Protein kinase-like (PK-like) 327 592 IPR011009 -
Vivi44g00024 617 MobiDBLite consensus disorder prediction 593 617 - -
Vivi44g00024 617 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 398 605 - -
Vivi44g00024 617 ProSiteProfiles Protein kinase domain profile. 323 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi44g00024 617 ProSitePatterns Protein kinases ATP-binding region signature. 329 360 IPR017441 GO:0005524
Vivi44g00024 617 Gene3D Ribonuclease Inhibitor 23 249 IPR032675 -
Vivi44g00024 617 ProSiteProfiles Leucine-rich repeat profile. 184 205 IPR001611 GO:0005515
Vivi44g00024 617 SUPERFAMILY L domain-like 38 219 - -
Vivi44g00024 617 PANTHER OS05G0588300 PROTEIN 8 603 - -
Vivi44g00024 617 FunFam Probable inactive receptor kinase RLK902 22 181 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi44g00024 14 613 Receptor kinase-like Gene Family AT4G23740 55.897 0.0 680
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi44g00024 Pkinase 9.8e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi44g00024 - - gmx:100813065 941.028