Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi444g00013 ATGGCTTTTCTTTTTATGCTAATCATTATCATTAATCTGTTTTTTGTTCTATCTCAAATTTCATTTGCAACGGATACTATCACTCAGTCAACTCCATTTCTTGATGGCAGCACTTTGGTTTCTAAAGATGGAACCTTTGAAATGGGATTCTTTGGTAATTCCTCAAACCGTTATATAGGAATTTGGTATAAAAATATCCCGGTTCGAAGAGTTGTTTGGGTTGCAAATCGCGATAATCCAACCAATGATAGTTCGAGCAAGTTGATCATAAACCATGATGGAAACCTTTTGCTTCTCAACCACAATGAATCTTTTGTTTGGTCAATAAATACAACAAGAAAGACTTCGGGTCCCGTTGTCCTTCAGCTTTTGGACACCGGAAATTTAGTACTCAAATATGAGAACTCAAATTCATATTCGGAGTCGAATTTAGGAGAAAATTTTTTGTGGCAGAGTTTTGATTATCCGTGTGATACAGTATTACCAGGAATGAAGTATGGGTGGAACAAAAAAACCGGATTGGAAAAGGGTCTTGTGGCTTGGAGAACCGCGAATGATCCATCTTCGGGTGATTTATCTTTATACATGATGCATACGAACAATCCCGAATCCATACTTCGGAAAGGATCAACAAAATATTATAGGACAGGACCATGGACATGGAATGCTCAAACTAGTGGAGTTATTGGATTAAAGACTAATCCAGTTTATAATTTCGAGTTTATGGACAACGAAGACGAAGTTTATTATAGGTTCACACTCAAAAACAAATCTGTGATATCTATAATAGATATCAACCAAACCCTTTCGTCGCGCCAACGTCTTCTTTGGGTTCCCGAGTTGAAAACATGGAGTGTTTACCAATCATTGCCACTTGATGCTTGTGATGTTTACAATTTTTGTGGCGCGAACGGACGTTGCATCATTGACGATTCGCCAATGTGTCGATGTTTAGATGGGTTTGAGCCAAAATCTTATCCGCGATGGAATGCAATGGAATGGACACAAGGATGTGTGCGGAGTGGAAATTGGAGTTGTGGAGTTAAAAATCGAGACGGATTTCGTAAATATTCCGGGATGAAGTTTCCGGATACTACAAATTCCTGGATCGATCTAAACATGACACTTGATCATTGCAAAATAAAATGTTTGCAAAATTGTTCTTGCACTGCTTATACATACTTGGATCTAACTAGAGAAGTTAGTGGTTGTTCTCTTTGGTTTAGTGATCTTCTTGATTTGAGACTTTCACAAGGTAGTGGCCAAGATTTATATGTTCGTACAGATGCTAGTTCAGATAATGATGCTAAACATGGGCAAAAGAAAAAGGTGATTTTGGAGTTTTCTACCACAATTCCAATTGCCCTTTTGATGCTATTGGCAATCTCCTACATTTATATAACCAAAGCAAAATCTAAAGGGAAAAATCTCCAAGTGGGGCATGAAGATTTTGAGCTTCCTCTATTTGATGTAGCCACAATGCTCAAGGCTACCAATAACTTCTCATTAGATAATAAACTCCGCGAAGGTGGTTTTGGACCTGTATATAAGGGTACATTGATAGATGGACAAATAATTGCTGTCAAAAGGCTTTCAGGAAATTTAGATCAAGGGTTGATAGAATTTAAAAATGAAGTCATATTATGTGCTAAATTGCAACATCGGAATCTTGTGAAGGTTCTTGGTTGTTGCCTTGATGGAGAGGAAAAAATATTACTATATGAATATATGCCTAAAAAAAGTCTTGATTTCTTTATTTTTGATCCGATTCAAAGTAAACTGATAGATTGGTCTATGCGTTTTAATATCTTGAATGGAATTGCTCGAGGACTTCAATATCTTCATCAAGATTCTAGGTTAAGGATCATTCACAGAGATTTGAAAGCGAGTAATATTTTATTAGACAATGAAATGAACCCTAAAATTTCAGATTTTGGCCTAGCTAAAATGTTCGGAGGTGATCAAATCGAAGGAAAGACAAGAAGAATAGTTGGAACATATGGTTACATGGCGCCTGAGTATATCATTCATGGATTATTCTCCATAAAATCTGATGTATTCAGCTTTGGCGTGTTATTGCTAGAAGTAATAAGTGGAAAGAAAAATAGATCACTTACCTATCACGAACATGATCAAAATCTTCTTTGGCATGCGTGGAGATTGTGGAGAGAGGGAATTCCACATGAATTGATAGATAATTGTTTAAAAGACACGTATGTTCAACATGAAGCTTTACGATGCATTCAAATAGGTCTTCTATGTGTGCAACATGTCCCTGATTATAGGCCAAGCATGCCACATGTGATAATGATGTTAGGCAGTGAAAGTACTTTACCTCAACCAAAAGAACCTGGTTTCTTAATTGAAATGATCGCGATTGAAGAACAATCTCTTTCTGAAAGACAAGCATCTTCTGTGAATGAAGTAACTCTTTCAATATTAAGTTCTAGATAG 2454 0.3655 MAFLFMLIIIINLFFVLSQISFATDTITQSTPFLDGSTLVSKDGTFEMGFFGNSSNRYIGIWYKNIPVRRVVWVANRDNPTNDSSSKLIINHDGNLLLLNHNESFVWSINTTRKTSGPVVLQLLDTGNLVLKYENSNSYSESNLGENFLWQSFDYPCDTVLPGMKYGWNKKTGLEKGLVAWRTANDPSSGDLSLYMMHTNNPESILRKGSTKYYRTGPWTWNAQTSGVIGLKTNPVYNFEFMDNEDEVYYRFTLKNKSVISIIDINQTLSSRQRLLWVPELKTWSVYQSLPLDACDVYNFCGANGRCIIDDSPMCRCLDGFEPKSYPRWNAMEWTQGCVRSGNWSCGVKNRDGFRKYSGMKFPDTTNSWIDLNMTLDHCKIKCLQNCSCTAYTYLDLTREVSGCSLWFSDLLDLRLSQGSGQDLYVRTDASSDNDAKHGQKKKVILEFSTTIPIALLMLLAISYIYITKAKSKGKNLQVGHEDFELPLFDVATMLKATNNFSLDNKLREGGFGPVYKGTLIDGQIIAVKRLSGNLDQGLIEFKNEVILCAKLQHRNLVKVLGCCLDGEEKILLYEYMPKKSLDFFIFDPIQSKLIDWSMRFNILNGIARGLQYLHQDSRLRIIHRDLKASNILLDNEMNPKISDFGLAKMFGGDQIEGKTRRIVGTYGYMAPEYIIHGLFSIKSDVFSFGVLLLEVISGKKNRSLTYHEHDQNLLWHAWRLWREGIPHELIDNCLKDTYVQHEALRCIQIGLLCVQHVPDYRPSMPHVIMMLGSESTLPQPKEPGFLIEMIAIEEQSLSERQASSVNEVTLSILSSR 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi444g00013 817 CDD B_lectin 32 156 IPR001480 -
Vivi444g00013 817 Gene3D Hepatocyte Growth Factor 345 423 - -
Vivi444g00013 817 Gene3D Phosphorylase Kinase; domain 1 463 576 - -
Vivi444g00013 817 Pfam Protein tyrosine and serine/threonine kinase 502 707 IPR001245 GO:0004672|GO:0006468
Vivi444g00013 817 SMART serkin_6 501 745 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi444g00013 817 ProSiteProfiles PAN/Apple domain profile. 346 429 IPR003609 -
Vivi444g00013 817 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi444g00013 817 Pfam S-locus glycoprotein domain 214 325 IPR000858 GO:0048544
Vivi444g00013 817 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 187 IPR036426 -
Vivi444g00013 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 466 576 - -
Vivi444g00013 817 Pfam PAN-like domain 346 414 IPR003609 -
Vivi444g00013 817 Pfam D-mannose binding lectin 71 182 IPR001480 -
Vivi444g00013 817 SMART blect_4 30 156 IPR001480 -
Vivi444g00013 817 Pfam Domain of unknown function (DUF3403) 775 817 IPR021820 GO:0004674
Vivi444g00013 817 SMART ntp_6 349 428 IPR003609 -
Vivi444g00013 817 Gene3D - 18 153 IPR036426 -
Vivi444g00013 817 PIRSF SRK 1 817 IPR024171 GO:0004674
Vivi444g00013 817 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Vivi444g00013 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 153 - -
Vivi444g00013 817 CDD PAN_AP_plant 345 428 - -
Vivi444g00013 817 SUPERFAMILY Hairpin loop containing domain-like 351 416 - -
Vivi444g00013 817 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 577 780 - -
Vivi444g00013 817 SUPERFAMILY Protein kinase-like (PK-like) 484 773 IPR011009 -
Vivi444g00013 817 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Vivi444g00013 817 Gene3D Transferase(Phosphotransferase) domain 1 577 781 - -
Vivi444g00013 817 CDD STKc_IRAK 509 772 - -
Vivi444g00013 817 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 764 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi444g00013 444 789 Receptor kinase-like Gene Family AT4G23230 52.857 9.53e-120 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi444g00013 PK_Tyr_Ser-Thr 1.2e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi444g00013 - - mtr:11419710 1186.02