Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi444g00011 ATGTCTTTTCCTTCTATGCTAGTTATCATCATCACTAGTCTTTTGTTTGTTCTATCTCATATTTCATTTGCAATAGATACTATCACCCAGTCAACTTCATTTCTTGATGGCAGCACTTTGGTTTCTAAAGATGGAAGCTTTGAATTGGGATTCTTTGGTAATTCCTCAAACCGTTATATAGGAATTTGGTATAAAAATATCCCGGTTCGAAGAGTTGTTTGGGTTGCAAATCGCGATAATCCAACCAAAGATAATTCGAGCAAGTTGATCATAAATCGAGATGGAAACCTTTTGCTTCTCAACCACAATGAATCTCTTGTTTGGTCAATAAATGCAACAAAAAAGATTTCGAGTCCCGTTTTCCTTCAGCTGTTGGATAACGGGAATTTTGTTCTTAGGTATAAGAATTCAAATTCAAATTCAAATTCAAATTCGGAGTCAAATTTGGGAGGAGAAGAAAATTTTTTGTGGCAGAGTTTTGATTATCCGTGTGATACAATATTATCAGAAATGAAATTTGGATGGAACAAAAAAACTGGATTTGAAAAGCGTCTTGCAGCTTGGAGAACCGCGGATGATCCATCTTCGGGTAATTTAACTATAACCATGATGCATACCAGCAATCCCGAAACTATAATTTGGAAAGGGTCAACAAAATATTATAGGTCAGGACCATGGAATGCTCAAACTAGTGGAGTTGTTGGATTAAAGACTAATCCACTTTATAATTTTGAGTTTATCAACAACGAGGACGAGGCGTATTATATGTACACACTAAAAAATAAAAGTGTGGTCTCAATAATGGTTATCAACCAAACCCTCTCGTCTCGTCAACGTCTCATTTGGGTTCCCGAGTCAAAAACATGGAGTATTTACCAATCATTGCCACTTGATGGTTGTGATGTTTACAACATTTGTGGCCCGAACGGACATTGCATCATTGATGGGTCACCAATGTGTCAATGTTTAGACGGATTTAAGCCGAAATCTTATGAACGATGGAATGCAATGAATTGGACACAAGGATGCGTGCAGAGTGGAAATTGGAGTTGTGGAGTTAAAAATCAAGATGGGTTTCATAAATTTGTAGGGATGAAGTTTCCGGATACTACGAATTCTTGGATCAATTTAAACATGACACTTGATAATTGCAAAATGAAATGCTTGCAAAATTGTTCTTGCACTGCTTATACATATTTGGATCCAACCGGAAAAGTTAGTGGTTGTTCTCTTTGGTTTGATGATCTTCTTGATTTGAGACTTTCACAAAGTAGTGGCCAAGATTTATATGTTCGTACAGATACTAGTTCAGAAATTGATGCTAAACATGGGCAGAGGAAAAATGTGATTTTGGCAGTTTCTATCCCAATTTCCATTGCCCTTTTGATGCTATTGGCTCTCTCCTACATTTATATAACCAAAGTAAAACATAAAGGAAAAAATCTCAAAGACGGCAACGAAGATTTTGAGCTTCCTCTATTTGATGTATCCACAATGCTCAAGGCTACAAATAACTTCTCATTCAATAATAAACTCGGCGAGGGTGGTTTCGGACCCGTATATAAGGGTACATTGATAGATGGACAAATAATTGCAGTCAAAAGACTTTCAGGAAAGTCTGAACAAGGGCTGATAGAATTTAAAAATGAAGTCATATTGTGTGCCAAATTGCAACATCGAAATCTTGTGAAGGTTATTGGTTGTTGCATTGAAGGAGAGGAAAAAATATTACTATATGAGTACATGCCTAAAAGAAGTCTTGATTTATTTATTTTTGCAGACTCGGTTCAAAGTAAATTATTAAATTGGTCTATGCGTTTTAATATCTTGAATGGAATTGCTCGAGGACTTCAATATCTTCATCAAGATTCTAGGTTAAGAATCATACACAGAGATTTGAAAGCGAGTAACATTTTATTAGATAATGAAATGAACCCAAAAATTTCAGATTTTGGCCTAGCTAAAATGTTCGGAGGTGATCAAATCGAAGGAAAGACAAGAAGAATAATTGGAACATATGGTTACATGGCGCCTGAGTATGTCATTCATGGATTATTCTCCATAAAATCCGATGTATTTAGCTTTGGCGTGTTATTGCTAGAAATAATAAGTGGGAAGAAAAATAGATCACTTACCTATCATGAACACGATCACAATCTTCTTTGGCATGCATGGAGATTATGGAGAGAGGGAGTCCCACATGAATTGATTGATAATTGTTTAAAAGACACATGTGTTCAACATGAAGCTTTACGATGCATTCAAATAGGTCTTCTATGTGTGCAACATATTCCTGATTATAGGCCAAACATGCCACATGTGATTATGATGTTAGGTGGTGAAAGTACTTTACCTCAACCAAAGGAACCAGGTTTCTTAATAGAAATGATATCAATTGAAGAACAATCTTTTTCTGAAAGACAAGCATCTTCCGTGAATGAAGTAACTCTCTCAATAATAAGTTCTAGATAG 2472 0.3572 MSFPSMLVIIITSLLFVLSHISFAIDTITQSTSFLDGSTLVSKDGSFELGFFGNSSNRYIGIWYKNIPVRRVVWVANRDNPTKDNSSKLIINRDGNLLLLNHNESLVWSINATKKISSPVFLQLLDNGNFVLRYKNSNSNSNSNSESNLGGEENFLWQSFDYPCDTILSEMKFGWNKKTGFEKRLAAWRTADDPSSGNLTITMMHTSNPETIIWKGSTKYYRSGPWNAQTSGVVGLKTNPLYNFEFINNEDEAYYMYTLKNKSVVSIMVINQTLSSRQRLIWVPESKTWSIYQSLPLDGCDVYNICGPNGHCIIDGSPMCQCLDGFKPKSYERWNAMNWTQGCVQSGNWSCGVKNQDGFHKFVGMKFPDTTNSWINLNMTLDNCKMKCLQNCSCTAYTYLDPTGKVSGCSLWFDDLLDLRLSQSSGQDLYVRTDTSSEIDAKHGQRKNVILAVSIPISIALLMLLALSYIYITKVKHKGKNLKDGNEDFELPLFDVSTMLKATNNFSFNNKLGEGGFGPVYKGTLIDGQIIAVKRLSGKSEQGLIEFKNEVILCAKLQHRNLVKVIGCCIEGEEKILLYEYMPKRSLDLFIFADSVQSKLLNWSMRFNILNGIARGLQYLHQDSRLRIIHRDLKASNILLDNEMNPKISDFGLAKMFGGDQIEGKTRRIIGTYGYMAPEYVIHGLFSIKSDVFSFGVLLLEIISGKKNRSLTYHEHDHNLLWHAWRLWREGVPHELIDNCLKDTCVQHEALRCIQIGLLCVQHIPDYRPNMPHVIMMLGGESTLPQPKEPGFLIEMISIEEQSFSERQASSVNEVTLSIISSR 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi444g00011 823 Pfam S-locus glycoprotein domain 221 330 IPR000858 GO:0048544
Vivi444g00011 823 Pfam D-mannose binding lectin 72 189 IPR001480 -
Vivi444g00011 823 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 194 IPR036426 -
Vivi444g00011 823 Pfam Domain of unknown function (DUF3403) 781 823 IPR021820 GO:0004674
Vivi444g00011 823 Pfam Protein tyrosine and serine/threonine kinase 507 713 IPR001245 GO:0004672|GO:0006468
Vivi444g00011 823 Gene3D - 19 160 IPR036426 -
Vivi444g00011 823 Gene3D Phosphorylase Kinase; domain 1 471 581 - -
Vivi444g00011 823 CDD PAN_AP_plant 350 433 - -
Vivi444g00011 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 786 - -
Vivi444g00011 823 SUPERFAMILY Protein kinase-like (PK-like) 487 786 IPR011009 -
Vivi444g00011 823 SMART serkin_6 506 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi444g00011 823 ProSiteProfiles Protein kinase domain profile. 506 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi444g00011 823 Pfam PAN-like domain 351 419 IPR003609 -
Vivi444g00011 823 PIRSF SRK 1 823 IPR024171 GO:0004674
Vivi444g00011 823 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Vivi444g00011 823 SMART ntp_6 354 433 IPR003609 -
Vivi444g00011 823 SMART blect_4 31 163 IPR001480 -
Vivi444g00011 823 Gene3D Transferase(Phosphotransferase) domain 1 582 786 - -
Vivi444g00011 823 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Vivi444g00011 823 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 769 - -
Vivi444g00011 823 ProSiteProfiles PAN/Apple domain profile. 351 434 IPR003609 -
Vivi444g00011 823 CDD STKc_IRAK 512 778 - -
Vivi444g00011 823 ProSiteProfiles EGF-like domain profile. 296 332 IPR000742 -
Vivi444g00011 823 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 471 581 - -
Vivi444g00011 823 CDD B_lectin 33 163 IPR001480 -
Vivi444g00011 823 CDD EGF_CA 298 330 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi444g00011 435 795 Receptor kinase-like Gene Family AT4G23230 52.603 4.50e-123 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi444g00011 PK_Tyr_Ser-Thr 5.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi444g00011 - - mtr:11419710 1207.2