Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi444g00009 ATGTCTTTTCCTTCTATGCTAGTTATCATCATCACTAGTCTTTTGTTTGTTCTATCTCATATTTCATTTGCAATAGATACTATCACCCAGTCAACTTCATTTCTTGATGGCAGCACTTTGGTTTCTAAAGATGGAAGCTTTGAATTGGGATTCTTTGGTAATTCCTCAAACCGTTATATAGGAATTTGGTATAAAAATATCCCGGTTCGAAGAGTTGTTTGGGTTGCAAATCGCGATAATCCAACCAAAGATAATTCGAGCAAGTTGATCATAAATCGAGATGGAAACCTTTTGCTTCTCAACCACAATGAATCTCTTGTTTGGTCAATAAATGCAACAAAAAAGATTTCGAGTCCCGTTTTCCTTCAGCTGTTGGATAACGGGAATTTTGTTCTTAGGTATAAGAATTCAAATTCAAATTCAAATTCAAATTCGGAGTCAAATTTGGGAGGAGAAGAAAATTTTTTGTGGCAGAGTTTTGATTATCCGTGTGATACAATATTATCAGAAATGAAATTTGGATGGAACAAAAAAACTGGATTTGAAAAGCGTCTTGCAGCTTGGAGAACCGCGGATGATCCATCTTCGGGTAATTTAACTATAACCATGATGCATACCAGCAATCCCGAAACTATAATTTGGAAAGGGTCAACAAAATATTATAGGTCAGGACCATGGAATGCTCAAACTAGTGGAGTTGTTGGATTAAAGACTAATCCACTTTATAATTTTGAGTTTATCAACAACGAGGACGAGGCGTATTATATGTACACACTAAAAAATAAAAGTGTGGTCTCAATAATGGTTATCAACCAAACCCTCTCGTCTCGTCAACGTCTCATTTGGGTTCCCGAGTCAAAAACATGGAGTATTTACCAATCATTGCCACTTGATGGTTGTGATGTTTACAACATTTGTGGCCCGAACGGACATTGCATCATTGATGGGTCACCAATGTGTCAATGTTTAGACGGATTTAAGCCGAAATCTTATGAACGATGGAATGCAATGAATTGGACACAAGGATGCGTGCAGAGTGGAAATTGGAGTTGTGGAGTTAAAAATCAAGATGGGTTTCATAAATTTGTAGGGATGAAGTTTCCGGATACTACGAATTCTTGGATCAATTTAAACATGACACTTGATAATTGCAAAATGAAATGCTTGCAAAATTGTTCTTGCACTGCTTATACATATTTGGATCCAACCGGAAAAGTTAGTGGTTGTTCTCTTTGGTTTGATGATCTTCTTGATTTGAGACTTTCACAAAGTAGTGGCCAAGATTTATATGTTCGTACAGATACTAGTTCAGAAATTGATGCTAAACATGGGCAGAGGAAAAATGTGATTTTGGCAGTTTCTATCCCAATTTCCATTGCCCTTTTGATGCTATTGGCTCTCTCCTACATTTATATAACCAAAGTAAAACATAAAGGAAAAAATCTCAAAGACGGCAACGAAGATTTTGAGCTTCCTCTATTTGATGTATCCACAATGCTCAAGGCTACAAATAACTTCTCATTCAATAATAAACTCGGCGAGGGTGGTTTCGGACCCGTATATAAGGGTACATTGATAGATGGACAAATAATTGCAGTCAAAAGACTTTCAGGAAAGTCTGAACAAGGGCTGATAGAATTTAAAAATGAAGTCATATTGTGTGCCAAATTGCAACATCGAAATCTTGTGAAGGTTATTGGTTGTTGCATTGAAGGAGAGGAAAAAATATTACTATATGAGTACATGCCTAAAAGAAGTCTTGATTTATTTATTTTTGCAGACTCGGTTCAAAGTAAATTATTAAATTGGTCTATGCGTTTTAATATCTTGAATGGAATTGCTCGAGGACTTCAATATCTTCATCAAGATTCTAGGTTAAGAATCATACACAGAGATTTGAAAGCGAGTAACATTTTATTAGATAATGAAATGAACCCAAAAATTTCAGATTTTGGCCTAGCTAAAATGTTCGGAGGTGATCAAATCGAAGGAAAGACAAGAAGAATAATTGGAACATATGGTTACATGGCGCCTGAGTATGTCATTCATGGATTATTCTCCATAAAATCCGATGTATTTAGCTTTGGCGTGTTATTGCTAGAAATAATAAGTGGGAAGAAAAATAGATCACTTACCTATCATGAACACGATCACAATCTTCTTTGGCATGTAAGTTTAACACTAAACAATTCTTTTGCTTTTATTAACATACTAAATAATAATTCTGTTAAATTTTTGAAGGCATGGAGATTATGGAGAGAGGGAGTCCCACATGAATTGATTGATAATTGTTTAAAAGACACATGTGTTCAACATGAAGCTTTACGATGCATTCAAATAGGTCTTCTATGTGTGCAACATATTCCTGATTATAGGCCAAACATGCCACATGTGATTATGATGTTAGGTGGTGAAAGTACTTTACCTCAACCAAAGGAACCAGGTTTCTTAATAGAAATGATATCAATTGAAGAACAATCTTTTTCTGAAAGACAAGCATCTTCCGTGAATGAAGTAACTCTCTCAATAATAAGTTCTAGATAG 2544 0.3526 MSFPSMLVIIITSLLFVLSHISFAIDTITQSTSFLDGSTLVSKDGSFELGFFGNSSNRYIGIWYKNIPVRRVVWVANRDNPTKDNSSKLIINRDGNLLLLNHNESLVWSINATKKISSPVFLQLLDNGNFVLRYKNSNSNSNSNSESNLGGEENFLWQSFDYPCDTILSEMKFGWNKKTGFEKRLAAWRTADDPSSGNLTITMMHTSNPETIIWKGSTKYYRSGPWNAQTSGVVGLKTNPLYNFEFINNEDEAYYMYTLKNKSVVSIMVINQTLSSRQRLIWVPESKTWSIYQSLPLDGCDVYNICGPNGHCIIDGSPMCQCLDGFKPKSYERWNAMNWTQGCVQSGNWSCGVKNQDGFHKFVGMKFPDTTNSWINLNMTLDNCKMKCLQNCSCTAYTYLDPTGKVSGCSLWFDDLLDLRLSQSSGQDLYVRTDTSSEIDAKHGQRKNVILAVSIPISIALLMLLALSYIYITKVKHKGKNLKDGNEDFELPLFDVSTMLKATNNFSFNNKLGEGGFGPVYKGTLIDGQIIAVKRLSGKSEQGLIEFKNEVILCAKLQHRNLVKVIGCCIEGEEKILLYEYMPKRSLDLFIFADSVQSKLLNWSMRFNILNGIARGLQYLHQDSRLRIIHRDLKASNILLDNEMNPKISDFGLAKMFGGDQIEGKTRRIIGTYGYMAPEYVIHGLFSIKSDVFSFGVLLLEIISGKKNRSLTYHEHDHNLLWHVSLTLNNSFAFINILNNNSVKFLKAWRLWREGVPHELIDNCLKDTCVQHEALRCIQIGLLCVQHIPDYRPNMPHVIMMLGGESTLPQPKEPGFLIEMISIEEQSFSERQASSVNEVTLSIISSR 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi444g00009 847 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 793 - -
Vivi444g00009 847 Gene3D Phosphorylase Kinase; domain 1 471 581 - -
Vivi444g00009 847 ProSiteProfiles Protein kinase domain profile. 506 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi444g00009 847 CDD STKc_IRAK 512 802 - -
Vivi444g00009 847 CDD PAN_AP_plant 350 433 - -
Vivi444g00009 847 Pfam PAN-like domain 351 419 IPR003609 -
Vivi444g00009 847 Gene3D Transferase(Phosphotransferase) domain 1 582 810 - -
Vivi444g00009 847 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 471 581 - -
Vivi444g00009 847 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Vivi444g00009 847 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 810 - -
Vivi444g00009 847 SMART ntp_6 354 433 IPR003609 -
Vivi444g00009 847 SMART blect_4 31 163 IPR001480 -
Vivi444g00009 847 Pfam D-mannose binding lectin 72 189 IPR001480 -
Vivi444g00009 847 SUPERFAMILY Protein kinase-like (PK-like) 487 810 IPR011009 -
Vivi444g00009 847 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 194 IPR036426 -
Vivi444g00009 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 628 640 IPR008271 GO:0004672|GO:0006468
Vivi444g00009 847 Pfam Protein tyrosine and serine/threonine kinase 507 707 IPR001245 GO:0004672|GO:0006468
Vivi444g00009 847 SMART serkin_6 506 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi444g00009 847 ProSiteProfiles PAN/Apple domain profile. 351 434 IPR003609 -
Vivi444g00009 847 Pfam S-locus glycoprotein domain 221 330 IPR000858 GO:0048544
Vivi444g00009 847 Gene3D - 19 160 IPR036426 -
Vivi444g00009 847 Pfam Domain of unknown function (DUF3403) 805 847 IPR021820 GO:0004674
Vivi444g00009 847 ProSiteProfiles EGF-like domain profile. 296 332 IPR000742 -
Vivi444g00009 847 CDD B_lectin 33 163 IPR001480 -
Vivi444g00009 847 CDD EGF_CA 298 330 - -
Vivi444g00009 847 PIRSF SRK 1 847 IPR024171 GO:0004674
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi444g00009 435 819 Receptor kinase-like Gene Family AT4G23230 49.357 1.04e-117 369
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi444g00009 PK_Tyr_Ser-Thr 1.3e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi444g00009 - - mtr:11419710 1193.72