Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi444g00001 ATGCCGAGCCACGAAATAAACCAACACCGGTCCAAAACCCGACCGTCCACATCAACCTCAGCAACCCGTCCAAACCAACCGGTCCAACCGCGAATCCCGCTACGGAGACTACTCCGAGTAGCTTCCGTAGCAAGCGGAATCCAATTCGGTTGGGCTCTACAGCTCTCACTCTTAACCCCCTATGTTCAGCAACTCGGCATTCCTCATAAATGGGCGAGTATCATCTGGCTCTGCGGACCGGTCTCCGGTCTATTCGTCCAGCCGTTGGTTGGACATTTAAGCGACCGGTGCGCGAGCCGGTTCGGTCGGAGGAGGCCGTTTATTTTAGTCGGCGCGACGTCGATCGTCGTCGCGGTTGTTATAATCGGTTACGCGGCGGATATTGGCTGGCTGATTGGGGATGATGTTAGCCAGAGTTATCGGCCGTTTGCGATTGGAGTTTTCGTGTTCGGGTTTTGGATTCTTGATGTTGCTAATAATGTTACGCAAGGGCCTTGTAGAGCTTTGCTCGCTGATCTTACCAGAAATGATGCTCGAAGGACACGTGTTGCAAATGCTTACTTCTCTCTGTTTATGGCCGTTGGTAACATTCTTGGCTATGCAACTGGATCATACAGTGGTTGGTACAAGATATTTACTTTCACAATTACCCCTGCTTGCTCTATCAGTTGTGCAAATCTCAAGTCTGCTTTCTTTCTCGACATTATTTTCATTGCGGTAACGACATATCTCAGCATTGTGTCAGCTAATGAAGTGCCTCTAAGTTCAAGTGGGGCAGCACATGCTGGAGAAGGGGCTGGAGAGTCAGGTGGTGCGGAAGAAGCTTTCATGTGGGAATTGTTTGGGACATTCAAATATTTTTCAATGCCTATCTGGATAGTACTGTCTGTAACTGCTCTAACATGGATTGGGTGGTTCCCATTTACTCTATTTGATACTGATTGGATGGGTCGGGAAATTTACGGTGGTGATCCAAATGGAGGCCTTGTTTATGATTCTGGAGTTAGAATGGGAGCACTTGGTTTGTTGCTTAATTCAGTTGTTCTTGGAATAACATCATTGCTCATGGAAAGACTATGCAGGAAGCGAGGGGCTGGTTTTGTGTGGGGACTCTCAAATATCTTTATGACTATTTGCTTTATGTCAATGTTAGTATTAACCTATGTGGCAAAGAGCATTGGCTACGTAGAAAAAGGTCTACCACCACCAACAGCCATTGTGATCGCAGCAGTAGCAATCTTTACCATTCTCGGGTTTCCACTGGCAATCACTTACAGTGTTCCATATGCCTTAATTTCCACACATATCGAACCATTGGGACTTGGCCAAGGGTTGTCAATGGGTGTCCTGAATCTGGCAATAGTGGTCCCGCAGATCATAGTGTCCTTGGGAAGTGGACCATGGGATCAGTTATTCGGTGGAGGAAACTCTCCAGCCTTTGCCGTGGCAGCGGTTGCAGCCCTTTTTAGTGGACTCTTGGCTTTATTAGCTATTCCCCGAACTGGTACACACAAGCCTCGAAGCCGTGTATGA 1533 0.4768 MPSHEINQHRSKTRPSTSTSATRPNQPVQPRIPLRRLLRVASVASGIQFGWALQLSLLTPYVQQLGIPHKWASIIWLCGPVSGLFVQPLVGHLSDRCASRFGRRRPFILVGATSIVVAVVIIGYAADIGWLIGDDVSQSYRPFAIGVFVFGFWILDVANNVTQGPCRALLADLTRNDARRTRVANAYFSLFMAVGNILGYATGSYSGWYKIFTFTITPACSISCANLKSAFFLDIIFIAVTTYLSIVSANEVPLSSSGAAHAGEGAGESGGAEEAFMWELFGTFKYFSMPIWIVLSVTALTWIGWFPFTLFDTDWMGREIYGGDPNGGLVYDSGVRMGALGLLLNSVVLGITSLLMERLCRKRGAGFVWGLSNIFMTICFMSMLVLTYVAKSIGYVEKGLPPPTAIVIAAVAIFTILGFPLAITYSVPYALISTHIEPLGLGQGLSMGVLNLAIVVPQIIVSLGSGPWDQLFGGGNSPAFAVAAVAALFSGLLALLAIPRTGTHKPRSRV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi444g00001 510 FunFam Sucrose transport protein 31 498 - -
Vivi444g00001 510 NCBIfam sucrose/proton symporter 32 501 IPR005989 GO:0005886|GO:0008515|GO:0015770
Vivi444g00001 510 SUPERFAMILY MFS general substrate transporter 35 502 IPR036259 -
Vivi444g00001 510 PANTHER SUGAR TRANSPORTER 31 496 - -
Vivi444g00001 510 MobiDBLite consensus disorder prediction 1 28 - -
Vivi444g00001 510 Pfam MFS/sugar transport protein 52 201 - -
Vivi444g00001 510 Gene3D MFS general substrate transporter like domains 34 506 IPR036259 -
Vivi444g00001 510 CDD MFS_SLC45_SUC 37 496 - -
Vivi444g00001 510 MobiDBLite consensus disorder prediction 12 27 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi444g00001 3 506 Sucrose Transporter Gene Family AT1G09960 67.976 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi444g00001 K15378 - gmx:100820483 788.875