Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi440g00003 ATGCTCGTGAAAATTGATATTCGTTGTCGTGTTCAAGGGGATGTCGTTCTTGAATGCGTACATTTAAACGAAGATTTCCTTAGTGAGGAGATGATGTTTAGAGTGATGTTTCATACTGCATTTATACGGTCAAATATTTTGGTGCTGAGCCGTGATGAAATCGATATATTGTGGGATACAAAGGATCAGTTCCCCAAGGATTTTAAATCTGAGGTGCTTTTTTTGGATGCTGATGCTGTTATACCTAATCTAACCACAGTCAATGTGAGTGAAGAAGATGAAAATGAGACAGAAAGCGGTTCCCCTGAGGAATTCTACGAAGTGGAAGAGATTTTCAGCAATGTAGTTGATATACAGGATTCTCCAAAGTTTCGTCAAAATGCAGTAGATGTCTGGAAAGAGTATTCAGATCCTCCTACCTTTCAGGATTCTACGCAAGATGACGGGATTAACCAACAGGTTGAATGGACAGATTCTGTTATTAATGAGGTGAAAGACATCACGGTTGATGATGTGAAATACAAGCTTGATGAGCGTGTAGATTCAGATACTCATGCAGTGAAAGATATTGCTGTGGATGGTGGAGAAAATAAGTTAACTTCCACTGCTGTTACTTTTGATATGACGGAAACTCCGGAGAGACAGGAAGTCACTTTGAATGTGCATGATGAGTTAGCAGTTACGCGAAACAATTATGATGAAGACAATGATGCAACACTTAAAGAATTAGAGCCTGAGGAAGGGCAGCAGACGCATGATCTTGCCGGATCAATATCTGGTGAAAAGAAACAACTTTCTTCAGACTCAAAGCCAGTGGGAGACGTAGTTGCAGAAAAGCAAAAGGCTAAACAGAAAGAACCACGGGGATTTCAGGAAAAACAGGCAAAAGAAAATGCAACAACTAGGTGGATACCTTCTAACAAAGGTTCTTATCAAGATTCAATGCATGTTTCATATCCACCGATAAGGCATAATAGTTTACCACCTGTTTTGTCAAATGCTACCTCTGCGAAGGAGAAAATGACTAATGCCAAAGGAAGACGTATTTCTAGTTCTCGTTCGACAAATGATCTGAAAAGTTGTAATGGGGACAATTCAAAATCTCTAGAAAGCATATGGGAAACTGATTCAAACGCCCAGCTGTCACCATTGACACCAATTACAGAGTCATCTCATCAGTCAGCTACTCAAGCACCACAGTTGAGCTCTGATCAAGTGCTACAACCTCATCTCCCCCCTTTCCCTCCACCCCCACCTCCACCCACATCACCATCTTCTTCCTTGGATGGTAAAGTGTCTACGATACCACAACCGCCGCCTCAACCGCCTCCTCAACCACCAGCACCACCTCCACCTTTTTTGTCAGGTTTTGGCAAGAAAAATGAAGAGATGGACTTACAAGCTGCAACTCATCCTCCTCCACCCCCACCTCCGCCTTCATTTTCTGCGCAAAATAGAGGGAGCTCATTACCTCTTTCTACTCACAGGAAGCCCTATTATTCATCAATTGGCATGGTTGGAGAAAATGGTGGTGCTTTACCTCCTTCAATAGGAAGTGTTTTTGCATCAAAAGTTTATAAATTAGTTGATGGAGTCTCTCTTCCCATTCCTCCTCCCCCACCACCTCCACCCCCTTCTTCTCTCCCCCCAAATTATGGAGTTACATCCATTCCTCCTCCACCACCTCCCTCACCTTCTTTGTCTTATATGGATAGAGCTCCACCACTCCTTCCTCCTATAACACCAACATCACTTAATGCTCCACTACCACCACCTTTAAGTAAATCTCAACCTCCACCTCCACCACCATTGCCGCTTACTCCTTCTTTTTGTAAAGCTCCATCAACCCCACTTGCTATTAGTATAGCTCCACTGCCTCCACCTCTACCTCATTTGAGTGGAGCACGACCTCCACCTCTTCCTTCAACAAGTAAAACACAACCTCCGCCACCACCACCTCTTCCTTCATCAAGTGCAGAACATCCACCACCACCACCACCGCCTCCTTCAATGTCTAACATCCCACCACCCCCACCCCCACCCATACCACCACCACCACCACTTTCTCTATCTTGTAGAGCATCTCTACCACCACCTCTTCCTTCAATTTCTAAGGGCCCCCTACCCCCACCCCCTCCTCCACCATTCTTTGGAACTCCACCATCATCATTTCATCCTAGATCAAGTAGAGCACCTTCACCACCACCTCCTTTGTCCAAGGATCCACCATTCTATAGAGCTCCACCCCCACCCCCACCCCCACCCCCACCATTCTATGGAACTCCACCACCACCACCACCACCACCACCTCTTTTTTCATCAAGTGGAGTACCTCCAACACCATCTCCTTCATTGCCTAAGGCCCCACCACCCCCACCACCACCACCATATCTTCCTACATTAAGTAGTGAAATACCTCCAACACCACCAACTCTTGCAATGTCTAAGGCCCCACCTTCAGCACTCAATAGAGCTCCACCACCACCACCACCACCATATCTTCCTGCATCTAATGGAGCACCTCAACCACCACCACCACCTCCTTCAATGTCTAAGACCCCACCACCACCACCTCCACCATTCTATGGGGCTCCACCAACCCCACCACCACCACCATATCTTCCTGCATCTAGTGGAGCACCACCGCCACCACCACCACCATATCTTCCTACAACTAGTGGAGCACCACCTCCTCCACCTCCCCCTTTTTATGGAGCAACACCACCACCACCACCACCACCTCATTCATTGTCTATGGCCCCACCACCCCCACCTCCACCATTCTATGGAGCTCCACCACCGCCACCACCTCCAATGCATGCAACACAGGCACCACCTCCTCCACCACCTCCGGGGGGTCGAGGCCCACCTCCTCCTCCACCTCTAGGTTTTCGAGGCCCACCTCCTCCGCCACCTCCAGGTTTTCGAGGCCCACCTCCTCCGCCACTTCCAGGTGGCCACGGCCCACCTCCTCCTCCACCTCCAGGTGGTCGAGGCCCTGCTCCACCACCGCCTCCTGGAGGTCATGCACCTGGTGCTCCCGCACCTCCTAGACTTCCAGGTGGTGCACCCCCACCACCCGGGGCTGATCCAAGAGGTAGAGGGCGTGGACTTGCTCGTCCTACTGGTGCAGCGGCACCTCGGCGATCCTCCTTAAAGCCTCTTCATTGGAGTAAGGTAACAAGGGCATTGCAAGGAAGTTTATGGGAAGAATTACAAAGACATGGAGAAACTCAAATTGGACAAGAGTTTGACGTTTCAGAGTTAGAGAAGCTTTTTGCTGTAAATGTTCCAAAACCTGCTGCTGCTGGTGGTAAATCTGGAGGGCTAGGCAAATCCGCAGGATCCAAACCTGAGAAAATTACCTTGGTTGATTTAAGGAGAGCCTATAATACTGAAATAATGCTTACAAAGGTTAAGATGCCTCTACCGGATATGATGGCTGCAGTTCTGGCTTTGGATGACACAGTATTAGATGTTGATCAGGTGGAAAATCTTATTAAATTTTGCCCTACCAAAGAGGAAATGGATCTTTTGAAGGCATATACTGGCAACAAGGAGAATTTGGGAAAGTGCGAACAGTTCTTTATGGAGCTGATGAAAGTGCCACGAGTTGAGTCGAAATTAAGAGTATTCTGTTTCAAGATTCAATTTCAGTGTCAGATTACAGAGTTTAATAAGAGTTTAAACTTAGTGAACTCTGCATGTGAAGAGGTCCGAAATTCAGTCAAACTGAAGGAGATTATGAAGAAAATTCTTTATTTGGGTAATGCATTGAATCAAGGAACAGCAAGAGGAGCTGCTGTTGGATTTAAGTTAGATAGCCTTTTAAAGCTCACCGATACTCGTGCTTCTAACAGCAAAATGACACTGATGCATTATCTTTGCAAGGTCCTAGCTGAAAAGTCTCCTACACTCCTTGATTTTCACCTCGACCTAGTTAGCGTAGATACTGCCTCTAAGATACAATTGAAGTCATTAGCAGAAGAAATGCAGGCAATTACCAAGGGACTAGAAAAAGTAAACCAGGAGCTTGCTGCTTCTGAAAGTGATGGCCCAGTATCTGAAGTTTTCCGTAAGACATTGAAAGATTTCGTTAATGAAGCCAAGTCTCAGGTGGATTCTGTAACACGCCTATATTCTGATGTGGGTAGAAATGCAGACGCACTTGCACAGTATTTCAATGAGGATCCCGCCCGTTGTCCTTTTGAGCAAGTTACTGCAACTCTCTTAAATTTTATAAGGATGTTTCTCAAAGCACATGATGATAATATCAAACAAGCAGAATTAGAGAAGAAGAAAGCTGAGAAAGAGGCCGAAATAGAAAAGAAGGCTAAGAAGGAGGCTGAAATGGAAAAGGGTAAAGGCAGTGGTTTGACAAGGAAGAGTAAAAAAGATAACGAAGAAGAAAGCTGA 4416 0.4626 MLVKIDIRCRVQGDVVLECVHLNEDFLSEEMMFRVMFHTAFIRSNILVLSRDEIDILWDTKDQFPKDFKSEVLFLDADAVIPNLTTVNVSEEDENETESGSPEEFYEVEEIFSNVVDIQDSPKFRQNAVDVWKEYSDPPTFQDSTQDDGINQQVEWTDSVINEVKDITVDDVKYKLDERVDSDTHAVKDIAVDGGENKLTSTAVTFDMTETPERQEVTLNVHDELAVTRNNYDEDNDATLKELEPEEGQQTHDLAGSISGEKKQLSSDSKPVGDVVAEKQKAKQKEPRGFQEKQAKENATTRWIPSNKGSYQDSMHVSYPPIRHNSLPPVLSNATSAKEKMTNAKGRRISSSRSTNDLKSCNGDNSKSLESIWETDSNAQLSPLTPITESSHQSATQAPQLSSDQVLQPHLPPFPPPPPPPTSPSSSLDGKVSTIPQPPPQPPPQPPAPPPPFLSGFGKKNEEMDLQAATHPPPPPPPPSFSAQNRGSSLPLSTHRKPYYSSIGMVGENGGALPPSIGSVFASKVYKLVDGVSLPIPPPPPPPPPSSLPPNYGVTSIPPPPPPSPSLSYMDRAPPLLPPITPTSLNAPLPPPLSKSQPPPPPPLPLTPSFCKAPSTPLAISIAPLPPPLPHLSGARPPPLPSTSKTQPPPPPPLPSSSAEHPPPPPPPPSMSNIPPPPPPPIPPPPPLSLSCRASLPPPLPSISKGPLPPPPPPPFFGTPPSSFHPRSSRAPSPPPPLSKDPPFYRAPPPPPPPPPPFYGTPPPPPPPPPLFSSSGVPPTPSPSLPKAPPPPPPPPYLPTLSSEIPPTPPTLAMSKAPPSALNRAPPPPPPPYLPASNGAPQPPPPPPSMSKTPPPPPPPFYGAPPTPPPPPYLPASSGAPPPPPPPYLPTTSGAPPPPPPPFYGATPPPPPPPHSLSMAPPPPPPPFYGAPPPPPPPMHATQAPPPPPPPGGRGPPPPPPLGFRGPPPPPPPGFRGPPPPPLPGGHGPPPPPPPGGRGPAPPPPPGGHAPGAPAPPRLPGGAPPPPGADPRGRGRGLARPTGAAAPRRSSLKPLHWSKVTRALQGSLWEELQRHGETQIGQEFDVSELEKLFAVNVPKPAAAGGKSGGLGKSAGSKPEKITLVDLRRAYNTEIMLTKVKMPLPDMMAAVLALDDTVLDVDQVENLIKFCPTKEEMDLLKAYTGNKENLGKCEQFFMELMKVPRVESKLRVFCFKIQFQCQITEFNKSLNLVNSACEEVRNSVKLKEIMKKILYLGNALNQGTARGAAVGFKLDSLLKLTDTRASNSKMTLMHYLCKVLAEKSPTLLDFHLDLVSVDTASKIQLKSLAEEMQAITKGLEKVNQELAASESDGPVSEVFRKTLKDFVNEAKSQVDSVTRLYSDVGRNADALAQYFNEDPARCPFEQVTATLLNFIRMFLKAHDDNIKQAELEKKKAEKEAEIEKKAKKEAEMEKGKGSGLTRKSKKDNEEES 1471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 274 295 - -
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 435 454 - -
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 821 1031 - -
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 620 814 - -
Vivi440g00003 1471 ProSiteProfiles C2 tensin-type domain profile. 1 77 IPR014020 -
Vivi440g00003 1471 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 74 IPR035892 -
Vivi440g00003 1471 Gene3D - 1 79 - -
Vivi440g00003 1471 Coils Coil 1418 1452 - -
Vivi440g00003 1471 PRINTS Proline rich extensin signature 412 428 - -
Vivi440g00003 1471 PRINTS Proline rich extensin signature 533 558 - -
Vivi440g00003 1471 PRINTS Proline rich extensin signature 440 452 - -
Vivi440g00003 1471 PRINTS Proline rich extensin signature 472 488 - -
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 533 569 - -
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 1431 1471 - -
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 244 517 - -
Vivi440g00003 1471 SUPERFAMILY Formin homology 2 domain (FH2 domain) 990 1437 - -
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 531 1054 - -
Vivi440g00003 1471 Coils Coil 1324 1344 - -
Vivi440g00003 1471 Gene3D Formin, FH2 domain 1061 1456 IPR042201 -
Vivi440g00003 1471 SMART PTEN_C2_2 3 76 IPR014020 -
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 347 407 - -
Vivi440g00003 1471 PANTHER FORMIN-J 956 1449 - -
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 296 314 - -
Vivi440g00003 1471 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1042 1443 IPR015425 -
Vivi440g00003 1471 Pfam Formin Homology 2 Domain 1048 1417 IPR015425 -
Vivi440g00003 1471 Pfam C2 domain of PTEN tumour-suppressor protein 1 74 IPR014020 -
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 409 425 - -
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 252 266 - -
Vivi440g00003 1471 MobiDBLite consensus disorder prediction 575 610 - -
Vivi440g00003 1471 SMART it6_source 206 1471 IPR015425 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi440g00003 1 360 FH2 protein (formin) Gene Family AT5G07740 42.746 6.88e-72 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi440g00003 - - mtr:25488802 707.597