Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi438g00018 ATGGATCCTTTTTTTCCTGAGAATCTTCTTCTAGGTGATGTTTTTTGGGATGAACAACCTCTTCTTTCAACAAGTAATTTTGTTCAAACACAACCTCGTCCTATACAAAATCCAAGTGCTTTTGTTCAATATAGAGACCAACAACCCAAGATTAGTTTAGGAAAACAAAGTTCTTTAAAAGGCTCCAATTCACATTCCATGAACAAGAGAATGTTTGCATTTTTGAGAAAAAGTTTGCCGGTAGAGAGAAGTAAAGTAGCTGATTGCGAAAGAGAACGTGGCTTCAAACACATGATTAGTGAAAGAATGAGAAGACAAAGACAGAGACAGTGTTGCCTCAACTTACATTCTGTTTTACCTCATGGAACCAAAACGGATAATAATTCAGTAGTTCAAACAGCAGCTAAGGAAATTCGAAGAATGCAAGGATGCAAAGAGGAGTTAGAGAGGAAAAACTTTGTGCTAGAAGGAAATATCAAGGAAAGAAAATCCCAGCATTTGAGAGTGACATATTCATCTACATCTGGAATTGATTCTATAGTTGAGACACTGAAATTGTTGAAAGGACATGGTGTGGACACTAGAAGGATCAAGACAGATTTTTCTCATCAAGAGTTTTTTGCAGTCTTGGAGATAGAAACTGAGATTGGAGAAGATGATGTGGCAGAGGCTGTTAAGAGAACACTTGATGAACTTGAGTGGAAGTTTCATTCTCATGTCCAAGAAGGTTCTGAAAAGCAAATATGA 747 0.3695 MDPFFPENLLLGDVFWDEQPLLSTSNFVQTQPRPIQNPSAFVQYRDQQPKISLGKQSSLKGSNSHSMNKRMFAFLRKSLPVERSKVADCERERGFKHMISERMRRQRQRQCCLNLHSVLPHGTKTDNNSVVQTAAKEIRRMQGCKEELERKNFVLEGNIKERKSQHLRVTYSSTSGIDSIVETLKLLKGHGVDTRRIKTDFSHQEFFAVLEIETEIGEDDVAEAVKRTLDELEWKFHSHVQEGSEKQI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi438g00018 248 Coils Coil 131 165 - -
Vivi438g00018 248 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 92 141 IPR011598 GO:0046983
Vivi438g00018 248 Gene3D - 84 158 IPR036638 GO:0046983
Vivi438g00018 248 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 1 227 IPR044658 -
Vivi438g00018 248 SMART finulus 98 147 IPR011598 GO:0046983
Vivi438g00018 248 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 89 152 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi438g00018 1 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 35.593 5.55e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi438g00018 - - gmx:100815874 246.899