Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi438g00014 ATGAAAACTTTCAAACCCCTTCACCACTTATCCACTCTCTTCTTCTTCTTCCTCTTCCTCCCCTTCCTCAACTCCCAAACTACAAGACAAGAAAACAACACAGGCTTCACCTGTAACAACAACAACAACAGCAGCAAAAACCAAACAAACACCTATCCATGCCAAACCTACGCATTCTACCGAGCAACCTCCCCAAACTACCTCGACCTCGCCACAATCTCCGACCTCTTCTCCCTCAGCCGCTTATCCATCTCTAAACCCTCCAACATCTCTTCCCCTTCCACCCCTTTACTCCCCAACCAACCCCTCCTCATCCCCATCACCTGTTCCTGCAACTTCATCAACACCACCTTCGGTTCCATCTCTTACTCCAACATCACCTACACCATCAAACCAAAAGACACTTTTTTCATTGTCTCAACCATAAACTACCAGAATCTCACCACCTACCCTTCCGTTGAAGTCGTTAACCCGAATCTCGTTGCTACTAATCTCTCAATCGGTGATAACGCTGTTTTTCCTATCTTCTGCAAGTGTCCTGATAGAACCAGAAACAGTTCCAGTTTCATGATTTCTTATGTTGTTCAGCCTTCTGATAATGTTTCATCTATTGCTTTGATGTTTGGAGCTTCTGAAAAGTCTATAACTGATGTTAATGGTGAGAAATTATATGATTATGATACTATTTTTGTTCCTGTTACTAAATTACCTGTTTTGAAACAACCTAGTACTGCTGTTGTTCCTTCTCCGGCGCCGAGTCGGAATTCTAATGATGTTGGTGGTGGTGATGGTGGTGATGATAAGAGTGGGATTGTTAGAGGGTTGGCTATTGGGTTGGGGATTTTAGGGTTTTTGTTGATTTTGATTTTGGGGATTTGGTTATACAGAGAGATTCTGTTTAAGAAGGAAGAGAAAGAGAAAAATTTGTATTTTGGAGAGAAAGGGAAAAAGGGGGAGGATTATAAGAAGAAGGGGATGGATGTGAATTTCATGGCTAATGTGTCTGATTGTTTGGATAAGTATAGGGTTTTTGGATTTGATGAATTGGTGGAAGCTACGGATGGGTTTGATGAAAGTTTTTTGATTCAAGGGTGTGTTTATAAAGGTGAGATTGATGGACAGGTTTATGCTATTAAGAAGATGAAGTGGAATGCTTATGAAGAGCTCAAAATTTTGCAGAAGGTAAACCATGGGAATTTGGTGAAGTTGGAAGGATTCTGCATAGAACCAGAAGAATCAAATTGCTATTTAGTCTATGAATATGTTGAAAATGGATCTCTCTACTCATGGTTACATGAAGACAAAAATGAAAAGTTGAATTGGGTAAGAAGACTAAGAATAGCCATTGACATAGCCAATGGTTTATTATACATTCATGAACACACAAGACCAAAAGTTGTACACAAAGACATTAAAAGTAGCAACATACTCTTGGACTCAAACATGCGAGCTAAAATTGCGAATTTCGGTCTTGCGAAGAGCGGAATAAATGCTATTACAATGCACATTGTAGGAACACAAGGGTACATTTCACCCGAATATCTAACCGACGGTGTCGTGTCGACAAAGATGGATGTGTTTTCCTTTGGTGTTGTGTTGTTGGAGTTGATTTCTGGGAAGGAAGTGATCGATGAGGAGGGAAATGTTTTGTGGGCTAGGGCTATAAAAACATTTGAAGTGAAAAGTGAACAAGAAAAAGCTAAGAGACTTAAGGAATGGTTGGATGAAGCTATTTTGAAAGAGACATGTTCAATGGAAAGTTTGATGGGTGTACTTAGTGTTGCTATTGCTTGCTTGCATAGAGATCCATCAAAGAGACCTAGTATTATAGATATTGTTTATTCACTTACTAAATGCGAAGAGAATGGATTTGAGCTATCTGATGATGGGTTTGGTACACAAAAATTGGTGGCTAGGTGA 1920 0.3979 MKTFKPLHHLSTLFFFFLFLPFLNSQTTRQENNTGFTCNNNNNSSKNQTNTYPCQTYAFYRATSPNYLDLATISDLFSLSRLSISKPSNISSPSTPLLPNQPLLIPITCSCNFINTTFGSISYSNITYTIKPKDTFFIVSTINYQNLTTYPSVEVVNPNLVATNLSIGDNAVFPIFCKCPDRTRNSSSFMISYVVQPSDNVSSIALMFGASEKSITDVNGEKLYDYDTIFVPVTKLPVLKQPSTAVVPSPAPSRNSNDVGGGDGGDDKSGIVRGLAIGLGILGFLLILILGIWLYREILFKKEEKEKNLYFGEKGKKGEDYKKKGMDVNFMANVSDCLDKYRVFGFDELVEATDGFDESFLIQGCVYKGEIDGQVYAIKKMKWNAYEELKILQKVNHGNLVKLEGFCIEPEESNCYLVYEYVENGSLYSWLHEDKNEKLNWVRRLRIAIDIANGLLYIHEHTRPKVVHKDIKSSNILLDSNMRAKIANFGLAKSGINAITMHIVGTQGYISPEYLTDGVVSTKMDVFSFGVVLLELISGKEVIDEEGNVLWARAIKTFEVKSEQEKAKRLKEWLDEAILKETCSMESLMGVLSVAIACLHRDPSKRPSIIDIVYSLTKCEENGFELSDDGFGTQKLVAR 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi438g00014 639 Gene3D Transferase(Phosphotransferase) domain 1 422 629 - -
Vivi438g00014 639 MobiDBLite consensus disorder prediction 243 263 - -
Vivi438g00014 639 ProSiteProfiles LysM domain profile. 191 238 IPR018392 -
Vivi438g00014 639 Gene3D LysM domain 180 243 IPR036779 -
Vivi438g00014 639 Gene3D Phosphorylase Kinase; domain 1 326 421 - -
Vivi438g00014 639 ProSitePatterns Serine/Threonine protein kinases active-site signature. 466 478 IPR008271 GO:0004672|GO:0006468
Vivi438g00014 639 FunFam PTI1-like tyrosine-protein kinase 3 422 629 - -
Vivi438g00014 639 SMART serkin_6 360 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi438g00014 639 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 619 - -
Vivi438g00014 639 SUPERFAMILY Protein kinase-like (PK-like) 342 616 IPR011009 -
Vivi438g00014 639 ProSiteProfiles Protein kinase domain profile. 338 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi438g00014 639 Pfam Protein kinase domain 373 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi438g00014 639 Pfam LysM domain 193 231 IPR018392 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi438g00014 35 618 Receptor kinase-like Gene Family AT2G23770 33.499 1.22e-81 268
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Vivi438g00014 Pkinase 3.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi438g00014 - - lang:109352405 828.935