Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi436g00023 ATGAATATCCAAATACTGTCATCTATTTTCTTACTCTTAAACTTGATTATTCCAATTGCATCCTCTTTGTCCTTTAATTTCACTCGTTTTGATCCTAATAACAAGACCATAATCTATAATGGATCAGCAATTCCAGCAACATCGACTATTCAACTTACAACAAACCAACAAGACAAGCAAATGAATAGAAGTATTGGTAGAGCCACATATTTCCAACCAATTTTCCTATGGAACAAAACCACAAAGAATCTCACAGATTTCACATCTCATTTCACTTTTACCATAGATTCACAGAAAAGGCTATATTATGGTGATGGAATTGCATTTTTTCTTGTCCCTTATGGTTCTGAGATGCCTAATGCAACACAAGGAGGTGCTATGGGTTTAACACTTGATAACCAACCACTGAACTCAACTGACTATCCATTTGTTGCTGTGGAGTTTGATATCTTTACCAATGACTGGGATCCACATCCAGCACATGAGCATGCCGGAATCGACATCAACTCGGTGAAATCTGTTGCTAATGCAACATGGCTGGCTGATATAAAAAAGGGTAGACTTAATGAGGCTTGGATCAATTACAATGCTAGTTCAAGAAATCTAAGTATTATATTCACTGGTTTCAATAATTTAACATCTTCTACTTCTGTGAACCAATCTTTATCTGCCATAGTTGATCTCAGACTTTATCTGCCAGAATTTGTTACTATTGGTTTCTCAGCTGCCACAGGAACTTCATATGCTATTCATAGTATATCTTCATGGGATTTTAGCTCAACTTTGGAAGCAGATCAAGATAACAATAAAACAATCACTGCTCCTGGTTCTAAGAAGGAAAAGGCCAAGACAGGCCTAGTAGTCGGATTGGGAATTGGTGGATTTGTTTTCATCTGCGTGTTCATTCTTATTTCGGTTTACTTGTGGAAGAAGTGGAAGAAAATAAAAGAGGAAGATGGTGAATTTGAAGAGTACATGGGTGAGGATTTCGGAAGAGGGACGGGACCCAAGAAGTATACATATGCAGCACTAGCACATGCAGCTAATAATTTCAAAGATGAGCACAAGCTAGGAGAAGGAGGATTTGGAGGTGTTTATAGAGGTTTTCTTAAAGATGCAAAATCTCATGTTGCTATTAAGAGAGTGTCGGAAGATTCTCATCAAGGGATAAAGGAGTTTGCATCAGAAGTAACCATTATTAGCAAATTAAGGCATCGGAATCTAGTGCAATTGATTGGTTGGTGTCATGAAAGGAAGAAGTTATTGCTTGTATATGAGTACATGCCGAATGGTAGTTTAGACATTCATCTTTTTAAAAAACAAAGCTTTTTGAAATGGGCTGTTAGATATACAATAGCTAAAGGCTTGGCTTCTGCATTGTTATATTTGCATGAAGAATGGGAACAATGTGTTGTACATAGAGACATAAAAGCAAGCAACATAATGCTTGATTCAGAGTTTAATGCAAAACTTGGAGATTTTGGTTTAGCAAGGTTTGTGGATCATGGAAAAGGCGCACAAACAACAGCTTTAGCAGGGACTATGGGATACATGGCCCCTGAATGTGCTACCACTGGAAGGGCTAGTAAAGAAACAGACGTGTATAGTTTCGGAATTGTTGCTTTAGAGATAGCTTGTGGAAGAAAACCAGTAAATATTAAGGCTCAAGAAAATGAAGTACATATTGTGGAGTGGGTTTGGGGGCTATATGGAAGAGGGAGAATTCTTGAAGCAGTGGATGAAAGACTAAGTGGAGATTTTGATGAGGAACAAATAAAGTGCTTGATGATTGTTGGTCTTTTGTGTGCTCACCCTGATCCTAATAATAGGCCTTCAATGAGACAAGCTATTCAAGTGCTTAATTTTGAAGCTCCAATGCCTCATCTTCCATCAAGTATGCCAGTGCCAACATATGCCGAAGGCCCTTTTAATTCATTCACATCTCCATTTAGCATAAGTGGTTCAGAGGAAGGTCAAAGCAAGAATATAATAAGTTATAGTTCAAACACAAACTCAACTACTACTACTTCTGATGTTTCTCCTTCTGTGTCTCTTCTGTATTCTAGATGA 2070 0.3773 MNIQILSSIFLLLNLIIPIASSLSFNFTRFDPNNKTIIYNGSAIPATSTIQLTTNQQDKQMNRSIGRATYFQPIFLWNKTTKNLTDFTSHFTFTIDSQKRLYYGDGIAFFLVPYGSEMPNATQGGAMGLTLDNQPLNSTDYPFVAVEFDIFTNDWDPHPAHEHAGIDINSVKSVANATWLADIKKGRLNEAWINYNASSRNLSIIFTGFNNLTSSTSVNQSLSAIVDLRLYLPEFVTIGFSAATGTSYAIHSISSWDFSSTLEADQDNNKTITAPGSKKEKAKTGLVVGLGIGGFVFICVFILISVYLWKKWKKIKEEDGEFEEYMGEDFGRGTGPKKYTYAALAHAANNFKDEHKLGEGGFGGVYRGFLKDAKSHVAIKRVSEDSHQGIKEFASEVTIISKLRHRNLVQLIGWCHERKKLLLVYEYMPNGSLDIHLFKKQSFLKWAVRYTIAKGLASALLYLHEEWEQCVVHRDIKASNIMLDSEFNAKLGDFGLARFVDHGKGAQTTALAGTMGYMAPECATTGRASKETDVYSFGIVALEIACGRKPVNIKAQENEVHIVEWVWGLYGRGRILEAVDERLSGDFDEEQIKCLMIVGLLCAHPDPNNRPSMRQAIQVLNFEAPMPHLPSSMPVPTYAEGPFNSFTSPFSISGSEEGQSKNIISYSSNTNSTTTTSDVSPSVSLLYSR 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi436g00023 689 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Vivi436g00023 689 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Vivi436g00023 689 Pfam Legume lectin domain 22 270 IPR001220 GO:0030246
Vivi436g00023 689 Gene3D Phosphorylase Kinase; domain 1 336 427 - -
Vivi436g00023 689 ProSitePatterns Legume lectins alpha-chain signature. 232 241 IPR000985 -
Vivi436g00023 689 SUPERFAMILY Protein kinase-like (PK-like) 335 640 IPR011009 -
Vivi436g00023 689 FunFam L-type lectin-domain containing receptor kinase IX.1 336 427 - -
Vivi436g00023 689 FunFam L-type lectin-domain containing receptor kinase IX.1 21 271 - -
Vivi436g00023 689 ProSiteProfiles Protein kinase domain profile. 351 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi436g00023 689 SMART serkin_6 351 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi436g00023 689 CDD lectin_legume_LecRK_Arcelin_ConA 23 262 IPR001220 GO:0030246
Vivi436g00023 689 MobiDBLite consensus disorder prediction 663 689 - -
Vivi436g00023 689 PANTHER - 49 630 - -
Vivi436g00023 689 Gene3D - 20 275 - -
Vivi436g00023 689 Gene3D Transferase(Phosphotransferase) domain 1 428 641 - -
Vivi436g00023 689 CDD STKc_IRAK 357 621 - -
Vivi436g00023 689 Pfam Protein kinase domain 351 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi436g00023 689 FunFam Lectin-domain containing receptor kinase A4.3 428 640 - -
Vivi436g00023 689 SUPERFAMILY Concanavalin A-like lectins/glucanases 20 270 IPR013320 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi436g00023 15 638 Receptor kinase-like Gene Family AT5G10530 51.185 0.0 605
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi436g00023 Pkinase 1.2e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi436g00023 - - cam:101491058 1022.69