Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi436g00019 ATGGTTCCTATATTCTGTTATGCAAGAGGGACAATTTTGCTTTTTCTGATAGTTCCTCTTGCACGCACTCACTTTGTGTCTTTTGATTATCCTATGTTTAGTCACGATTGTAAAGAGCCGCCAGAGCTTGATGGAGATGCCAATATTGAAGATTCTAACAATCTTATTCGGCTAACTGGATACCCTGATGACCCAGATAAGGCTTCTGGCGTCGGTCGAGTCACAATTCCCAAACTTATCAAACTTTATGACACAAGTGCAAATCAAGTATATGATTTTACTACCAAGTTTTCCTTTACTATATTTTCAAATCACAGTATTTATGGAGATGGTTTGGCATTCTTCCTTGCAAGTTCATATCTTCCAAAAGCAAATCATGTAGGTAATGGAGGGGGCTTTGGTCTTGTACCTACAAGCAAAGTTTCTTTAAACTCAACTGAGTATTCATTTGTGTCAGTGGAGTTCGACACGTACCAAAATTATTGGGACCCAGGGGTCAACCATGTGGGGGTGAATATCAATTCTGTGGTGTCCGATACATATATTAAATGGTCTGCAGATGTTTCAGAAAGGATAGTTTATAATTGTAGCATTGAATACAGTTCCAAAAATAATAATCTGAACGTGTCTATCACTGGATACAGATTGAATGAAGAGCGAGAGCTACAAACCTTTTCACACATCATTGATCTAAAAGAGCACTTACCAGAGTATGTTATTGTTGGCATATCAGCTTCAACAGGAACTGTAGATGAGGAGCATATGCTGCTGTCGTGGTCTTTTAGTACAAGCCAACCAGATTATGATTCTTATGAAGATGATCCTGAGAAAAAAATAAACTTAACCAAGGCTAAATTCTTGGAGGGATTGGGAGTAGGTTTTGGGTGTTTGAGTTTAATAGCAATGTTAATCATTTTATTGTGGAAGAAGAATAATGGAAAAGGAGAAGACCTTACTTCAGAAACCAAGTCTGATCTGGATATGGATGATGAATTCCAAACAGGTGCTGGACCTAAGAAGATGAGTTATTATGAGTTGATGAATGCAACAAACAACTTTGAAGAGACACAAAAACTTGGCCAAGGTGGTTTTGGTGGTGTTTACAAGGGTTATTTTAAAGATTCAAACTCATTTGCAGCTATAAAGAGGATATCAGCAGATTCAAGACAGGGTATAAAGCAATACTCAGCAGAAGTGAAGATCATCAGTCAATTGAGGCATAGAAATTTGGTGAAACTCAATGGTTGGTGCCACAAGAAGAACGAACTTATCCTAATATACGAATACATGCCTAATGGTAGTTTAGATTTTCATCTTTTTCGAGGAGGAAGCATTTTGTCGTGGAAGTTGAGGTATAACATAGCTCTTGGGTTGGCCTCAGCATTGCTTTATTTACAGGAAGAATGGGAAAAATGTGTGATTCATAGGGACATAAAATCAAGCAACATAATGTTGGACTCCAACTTCAACACTAAGCTTGGGGATTTCGGTCTAGCTAGACTTATGGATCATGAAAAAGGGTCAGAAACCACAGTTGTGGCTGGAACCAGGGGTTACCTAGCACCTGAATACTTGGACACAGGCAAAGCTAGAAAGGAATCTGACATATTCAGTTTTGGGGTTGTTTTATTGGAAATAGCCTGTGGAAAAAAAGCCATACACCACCAAGAACTAGAGGGCGAAGTTTCATTAGTTGAATGGGTTTGGGAGCTATATGGATTGAGAAATCTAACTGTAGCAGTAGATCCAAAGCTATGTGGGGTTTATGATGTGAAGCAATTAGAATGTTTGCTAGTAGTTGGACTTTGGTGTGCTAATCCAGATAACACATCAAGACCATCTATAAAGAAAGTGATTAAGGTACTAAACTTTGAAGCTCCATTACCTATTCTTCCACAAAATATGCCATTCCTAGCTTCTCTGTCTCCCACAACAAATGATCAATTTTTCTCAGTCCCTTCTTTCTTTAGATCTACAGGCTAG 1983 0.3838 MVPIFCYARGTILLFLIVPLARTHFVSFDYPMFSHDCKEPPELDGDANIEDSNNLIRLTGYPDDPDKASGVGRVTIPKLIKLYDTSANQVYDFTTKFSFTIFSNHSIYGDGLAFFLASSYLPKANHVGNGGGFGLVPTSKVSLNSTEYSFVSVEFDTYQNYWDPGVNHVGVNINSVVSDTYIKWSADVSERIVYNCSIEYSSKNNNLNVSITGYRLNEERELQTFSHIIDLKEHLPEYVIVGISASTGTVDEEHMLLSWSFSTSQPDYDSYEDDPEKKINLTKAKFLEGLGVGFGCLSLIAMLIILLWKKNNGKGEDLTSETKSDLDMDDEFQTGAGPKKMSYYELMNATNNFEETQKLGQGGFGGVYKGYFKDSNSFAAIKRISADSRQGIKQYSAEVKIISQLRHRNLVKLNGWCHKKNELILIYEYMPNGSLDFHLFRGGSILSWKLRYNIALGLASALLYLQEEWEKCVIHRDIKSSNIMLDSNFNTKLGDFGLARLMDHEKGSETTVVAGTRGYLAPEYLDTGKARKESDIFSFGVVLLEIACGKKAIHHQELEGEVSLVEWVWELYGLRNLTVAVDPKLCGVYDVKQLECLLVVGLWCANPDNTSRPSIKKVIKVLNFEAPLPILPQNMPFLASLSPTTNDQFFSVPSFFRSTG 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi436g00019 660 Gene3D Phosphorylase Kinase; domain 1 338 429 - -
Vivi436g00019 660 SMART serkin_6 353 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi436g00019 660 FunFam Lectin-domain containing receptor kinase A4.3 430 642 - -
Vivi436g00019 660 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Vivi436g00019 660 Gene3D Transferase(Phosphotransferase) domain 1 430 638 - -
Vivi436g00019 660 ProSitePatterns Legume lectins beta-chain signature. 151 157 IPR019825 -
Vivi436g00019 660 PANTHER - 45 626 - -
Vivi436g00019 660 CDD STKc_IRAK 359 623 - -
Vivi436g00019 660 ProSiteProfiles Protein kinase domain profile. 353 638 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi436g00019 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 473 485 IPR008271 GO:0004672|GO:0006468
Vivi436g00019 660 Pfam Legume lectin domain 27 269 IPR001220 GO:0030246
Vivi436g00019 660 SUPERFAMILY Protein kinase-like (PK-like) 338 648 IPR011009 -
Vivi436g00019 660 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 265 IPR013320 -
Vivi436g00019 660 Pfam Protein kinase domain 353 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi436g00019 660 FunFam L-type lectin-domain containing receptor kinase IX.1 338 429 - -
Vivi436g00019 660 Gene3D - 24 267 - -
Vivi436g00019 660 CDD lectin_legume_LecRK_Arcelin_ConA 26 264 IPR001220 GO:0030246
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi436g00019 11 636 Receptor kinase-like Gene Family AT5G10530 45.469 6.54e-173 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi436g00019 Pkinase 8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi436g00019 - - cam:101492002 1061.21