Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi436g00018 ATGGTTTTTTTGCATATTAGTCTTCACACTCAAACTTTTGTTTTCTGTTATGCAATAGGAACCATTTGCACTTTCCAAATAATCTATCTTGCAAACTCACTATCATTTGATTACCCCTACTTTAAGAATGGTGATGTCAATTGGGAAGGAGATGCTTCTCCTTATAAAGGAACTATTCAAATCACTTCCAACACGCTTGATCAAAACAACAATTATAGTGTCGGTCGAGTCACGAGTTTTAAAGAGATGCATCTCTGGGATTTGAAATCTGGAAACCTTTCTGACTTCACCACCAATTTTTCCTTTGTTGTTTTTTCTAACACGCAGAATTATGGAGATGGAATGGTATTCTTCATGGCGGATCCAAATCTTCCACTTTTGAAGAATATCAAACAAGGTGGTGGTCTTGGCCTTGTGGATGGAGACCAAGTACTAGAATCTACTCAACATTCATTTGTGGCAGTGGAGTTCGACACTTTCAATAATCCGTCGTGGGACCCTGCAGGTGAAGGCACTCATGTTGGTTTGAATTTCAACTCTATGAGGTCTAATATTACTAAACCATGGTTGGCAAATATTCTTAAATGGAAAGTTTACAATTGCAGCATTGAGTACAATTCCAACACTTTTAATTTGAGTGTTTCATTCACCATGTATGATGATGATGATGATGAACCAGTTGAAGGGTACATATCACACAAGGTTGATTTGAGAGATTTATTACCAGAGAGGGTTATTGTTGGCTTCTCTGCTGCAACAGGGAGATTGTACGAGGTGCATACTCTTCGATCATGGTCATTTCATTCAAGTCTATTAAGTGATGAGACCAGATATCAGATAATGGCCCCAATTCCCAGTCCTATGATTTCTGAAAGAGATAACAAGATAGGATTGAAGGTAGGGCTTGGAATTGGTACCGGATTGGCTGTGAGTTTATCAGGGCTAGTTTGTACTCTATTATGGAAGAGGTGTAGAGGAAGAAAAAAAGAGTTTGGTTTTGATCTTGACATGGATGACGAATTCCAAAAGGGCTCTGGACCCAAGAGGTTTTCCTACAATAAACTAGTGAGTGCAACAAATAAATTTTCAGAGTCAGATAAGGTGGGGCAAGGTGGTTTTGGTGGTGTATACAAAGGTTACTTGAAAGGAATGAACTCCTACGTTGCTATCAAGAGGATATCAAGAGAGTCTAGACAGGGAATACTAGAATATGCGACTGAAGTGAAGGTCATAAGTCAACTGAGACACAGGAATCTAGTACAACTTCTAGGTTGGTGCCACAAGAAGAATGATTTTCTTCTTATATATGAGTTCATGTCAAATGGAAGCTTAGATTCTCATCTGTATGGTAAGAAAAGCTTCCTGACATGGACGGCGAGGTATAACATTGCATTGGGCTTGGCTTCAGCATTGCTTTATTTACAGGAAGAATGGGAGCAGTGTGTGCTTCACAGGGACATTAAATCAAGCAACATTATGTTGGATTCATGTTTCAATACTAAGCTTGGTGATTTTGGTTTAGCTAGGCTTGTGGATCATGAGAAAGGGTCACAAACCACACTTATTGCTGGGACAAGGGGTTATATTGCCCCTGAATATTTCACATCAGGAAAAGCTACTAAGGAATCTGATATCTACAGCTTTGGGATAGTGTTATTGGAAATCGTCACCGGAAGGAAAGCTATTGAAAGAGAAGAAAAGGAAGGTCAAATAAGTGTTGTTGAGTGGGTTTGGGAGCTTTATGGATTTGGAAAGTTCCTTGAAGCAGCTGACCCTAGGTTAGGTAGGGCATTTGATGAGCAGCAATTGGAACGTTTGGTGATAGTTGGCCTTTGGTGTGCTCATCCAGATTACGTATTTAGGCCTTCTATAAAACAAGTGATTCAGGTGCTCAAGTTTGAGTCTTCTCTGCCAATTCTCCCAGAAAAAATGCCTGTGCCAACCTATCTTCCTCCAACAATAAAAGCGCTTTTTTCTTCATTTTCGTCCACCTATTGGACAAATAGTTAG 2010 0.396 MVFLHISLHTQTFVFCYAIGTICTFQIIYLANSLSFDYPYFKNGDVNWEGDASPYKGTIQITSNTLDQNNNYSVGRVTSFKEMHLWDLKSGNLSDFTTNFSFVVFSNTQNYGDGMVFFMADPNLPLLKNIKQGGGLGLVDGDQVLESTQHSFVAVEFDTFNNPSWDPAGEGTHVGLNFNSMRSNITKPWLANILKWKVYNCSIEYNSNTFNLSVSFTMYDDDDDEPVEGYISHKVDLRDLLPERVIVGFSAATGRLYEVHTLRSWSFHSSLLSDETRYQIMAPIPSPMISERDNKIGLKVGLGIGTGLAVSLSGLVCTLLWKRCRGRKKEFGFDLDMDDEFQKGSGPKRFSYNKLVSATNKFSESDKVGQGGFGGVYKGYLKGMNSYVAIKRISRESRQGILEYATEVKVISQLRHRNLVQLLGWCHKKNDFLLIYEFMSNGSLDSHLYGKKSFLTWTARYNIALGLASALLYLQEEWEQCVLHRDIKSSNIMLDSCFNTKLGDFGLARLVDHEKGSQTTLIAGTRGYIAPEYFTSGKATKESDIYSFGIVLLEIVTGRKAIEREEKEGQISVVEWVWELYGFGKFLEAADPRLGRAFDEQQLERLVIVGLWCAHPDYVFRPSIKQVIQVLKFESSLPILPEKMPVPTYLPPTIKALFSSFSSTYWTNS 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi436g00018 669 SUPERFAMILY Concanavalin A-like lectins/glucanases 32 287 IPR013320 -
Vivi436g00018 669 ProSiteProfiles Protein kinase domain profile. 362 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi436g00018 669 ProSitePatterns Legume lectins alpha-chain signature. 241 250 IPR000985 -
Vivi436g00018 669 FunFam Lectin-domain containing receptor kinase A4.3 439 651 - -
Vivi436g00018 669 Pfam Legume lectin domain 33 271 IPR001220 GO:0030246
Vivi436g00018 669 Pfam Protein kinase domain 363 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi436g00018 669 FunFam L-type lectin-domain containing receptor kinase IX.1 32 279 - -
Vivi436g00018 669 SMART serkin_6 362 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi436g00018 669 Gene3D - 31 284 - -
Vivi436g00018 669 PANTHER - 59 633 - -
Vivi436g00018 669 CDD STKc_IRAK 368 632 - -
Vivi436g00018 669 CDD lectin_legume_LecRK_Arcelin_ConA 34 271 IPR001220 GO:0030246
Vivi436g00018 669 ProSitePatterns Legume lectins beta-chain signature. 153 159 IPR019825 -
Vivi436g00018 669 ProSitePatterns Protein kinases ATP-binding region signature. 368 391 IPR017441 GO:0005524
Vivi436g00018 669 Gene3D Transferase(Phosphotransferase) domain 1 439 651 - -
Vivi436g00018 669 Gene3D Phosphorylase Kinase; domain 1 347 438 - -
Vivi436g00018 669 FunFam L-type lectin-domain containing receptor kinase IX.1 347 438 - -
Vivi436g00018 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 482 494 IPR008271 GO:0004672|GO:0006468
Vivi436g00018 669 SUPERFAMILY Protein kinase-like (PK-like) 346 661 IPR011009 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi436g00018 13 649 Receptor kinase-like Gene Family AT5G10530 45.538 0.0 528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi436g00018 Pkinase 3.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi436g00018 - - gmx:100780181 1002.66