Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi436g00011 ATGGAGACCTATCAATATCCTCCGTCATATCCAGATTCCGGCCACTCATCACCACGTTCAAGAGATATCGATTTTGACAATCAAGCCTCATGGGAAGACCAGCAGAACTACAAAGCCAAATTCATGTGCAGCTACGGCGGGAAGATCCAACCACGCAGCCACGACAACCAGCTTTCTTACATCGGCGGTGACACCAAAATATTAGCCGTCGACAGAAACATCAAGTTTCAAGCCTTCCTCTCCAAGCTCTCCACTCTCTGCGACGCTATTCCACAAGAGATAAGTTTCAAGTACCAGCTTCCAGGTGAAGAACTCGATGCTCTTATCTCTGTCACAACAGAAGACGACCTTGAACACCTCATGCATGAGTACGATCGCCTCTATCGTCCTTCCTCAAAACCCGTTCGAATGAGGCTCTTCATATTCATCACTCCAAATTCGGGTTCGATTTCTCAACCTGAACTACTTAAACCTCAATCCAACGCTGATTTCCTCTTTGGTCTTGATAACAAAACCCTAGCTCCACCGGTTCAAGTTCAACCTCCTTCCTATGCTGCTGTGAAGTATCATGAGCCTGTGCCAGATCTTGTTGCACAGCAACCTGAGTATCCGCCACGTGGACCAGCGGATGATAGTGTCGAGATTCAGAGGCAGTTACAGCGTTTGCAGGTTTCCGAGAGTGAGCAATCTTTGTATCGGAGAAGCGTAGATGGATTCCCCGGAGGCTATGCTCCTGTCACTGCTCCTGGTAGTGATTATTACCCGCAGAAGATGCTGGAGAAAGCTGCTCCTTCGAATTCCCCAACTGCTGTTCATCAACCTGCGGGTTACTGGCCGGAAAAACAATTTTCCAGCGAAGGTTTTCCGATGACAGGGATGAACGCTTCCGGTGGAGGAGACCAGCATGTTTACATGATGCCGACACCGGGAACATTCTACCACGCGCCTCAGGTGATGCGCCCACCGACGGCGCAGGTGACCCAGGGGTACTACGCTGTGCAGCGAATGTCTTCTGATGGATACCGGGAACAGCCGGTGTACGGTGGCGTTCAGCCTCAGAATGTAGCGTTTTCGTCTGCGGGTCAGGGAAATTTAGCACCGGCTCAGCAAGTCAAACCTTTGGCTTATGCGGAAGGCTATGGATTAGTTAGGCCAGCTGGCATAGCGGATAATGCGGGAGCTGCTGGATATGCGCAAGTGGCGTATGATAGTGCAAGTGGGAGACAAATTTACTATACTGCGCCTGGAGGGATGGTACATGCGCCGCAGTATCAAGGGGTTGCTCCGGTATTCAGCAATGACATGAGACCGGCTGCGGCTCCTGTGGGCCAGGATCCTAAAGGTGTAAACAAGGGCCCACAAGGATAA 1368 0.5088 METYQYPPSYPDSGHSSPRSRDIDFDNQASWEDQQNYKAKFMCSYGGKIQPRSHDNQLSYIGGDTKILAVDRNIKFQAFLSKLSTLCDAIPQEISFKYQLPGEELDALISVTTEDDLEHLMHEYDRLYRPSSKPVRMRLFIFITPNSGSISQPELLKPQSNADFLFGLDNKTLAPPVQVQPPSYAAVKYHEPVPDLVAQQPEYPPRGPADDSVEIQRQLQRLQVSESEQSLYRRSVDGFPGGYAPVTAPGSDYYPQKMLEKAAPSNSPTAVHQPAGYWPEKQFSSEGFPMTGMNASGGGDQHVYMMPTPGTFYHAPQVMRPPTAQVTQGYYAVQRMSSDGYREQPVYGGVQPQNVAFSSAGQGNLAPAQQVKPLAYAEGYGLVRPAGIADNAGAAGYAQVAYDSASGRQIYYTAPGGMVHAPQYQGVAPVFSNDMRPAAAPVGQDPKGVNKGPQG 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi436g00011 455 SUPERFAMILY CAD & PB1 domains 54 150 - -
Vivi436g00011 455 SMART PB1_new 53 144 IPR000270 GO:0005515
Vivi436g00011 455 MobiDBLite consensus disorder prediction 435 455 - -
Vivi436g00011 455 Pfam PB1 domain 54 141 IPR000270 GO:0005515
Vivi436g00011 455 MobiDBLite consensus disorder prediction 1 16 - -
Vivi436g00011 455 PANTHER OS05G0427100 PROTEIN-RELATED 10 332 - -
Vivi436g00011 455 CDD PB1_UP2 42 142 - -
Vivi436g00011 455 Gene3D - 59 143 - -
Vivi436g00011 455 MobiDBLite consensus disorder prediction 1 24 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi436g00011 37 145 MAP Kinase Kinase Kinase AT5G57610 42.202 1.78e-23 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi436g00011 - - psat:127106335 892.878