LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi436g00005	ATGTTGGAGTCTTTACTATCTTGTTCCCAAACCCTCAAGGGATATGACTTGACCAATCAAAAGAGTCCCGGCTATTCTCGTGCTGCTTCGCGAATTTGTAGAAGTTCTAAGCAAGTTCCGTTTCTATGTCATAGTACTGCTGTATCAGAGAAATTCACTAGAAGAACGTCTCTGGATGTTCCTTCATTTTCTGGTTGGAAATTATCCTATTTCTCTAAGTATAGGCCACTAAGGTGGGAACGGTTACAAACAAATGCTACGTCATATGATGTTGCTGGAGCTGTTGAAGTTGTCAATGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTTACCGTTTTTATCGTCCCGTCGTTCAAGTTTATTAAAGCCAGTCCTATACTTGGTTTCTTCCTTGCTGGGGTGGTGCTTAATCAGTTTGGTTTAATTAGGAACCTTGAAGATGTTAAAGTTTTGTCTGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTGGAACTTTCACTAGCACGTTTGAAAGCTCTTGCAAAATATGCTTTCGGAATGGGATTGACTCAGGTTTTACTATCTACTTTAGCATTCACTGCTTTTGAGCTTCCACCAAATGGGGCTGTTGGAACTCAAATTTTGCAATTCCTTTTCCACTCAAGGTCTGATCTGGTGAACATCAGAAGTGTCGACGAAGCTGTAGTGATTGGAGCTGCTCTCTCTCTGTCATCTTCTGCATTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAGCTTCCTACAAGGCTTGGTTCAGCAACTCTTGGGATACTTCTTTTGCAGGACATAGCTGTTGTCCCTCTTTTGGTTATACTTCCAGTACTTGAGAGCCAGACTATGACTGAGGAAAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTGAAGGCATTAGGTGGATTGGGTCTGCTTTCATTTGGAGCAAAGTATATCCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACAAGAAGTTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACTATTGCTGGGACTTCACTACTCACACAGAAACTGGGCTTCAGTGATACGCTTGGAGCATTTTTAGCTGGGGCAATCCTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCAGACATAAGACCATTTAGAGGCTTGCTGCTCGGATTGTTTTTTCTAACTACAGGGACTTCAATAGACATGCAGGTTCTCTTGCGAGAGTGGCCAAACGTACTTGCGCTCTTGGCGGGTTTAATCACGATCAAAACATTGATCATAACTGCGATTGGTCCTCGTGTTGGCCTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGGGAGTTTGGATTTGTAGTATTCTCTTTGGCGAATAGACTTGGGGTGCTTCCACTCGAGCTTAACAAACTGCTCATAATTGTTGTTGTATTGTCAATGGCGCTAACCCCATTTCTGAATGAAGCTGGAAGGAGGGCTGCTAGCTTTATTGAAGATCAATCTGATGACGAGAATAAACAGAAAGATCCTGATATGGTTAATTTCGATGTTAATGAACCTGTTGTCGTCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCTAATTTGCTGTCCAACCCAATGGCTTCAGAAGGAGATAGTGATACAATAGGATGGCCTTATGTGGTATTTGATATTGACGCCAGGGTTGTAAAGGAAGGTAGAAAACTTGGCTTTCCTATTATCTATGGGGATGGATCAAGTCCAGGTGTTCTTCAATCTGCCGGTATCTCATCTCCAAAAGCTATCATGGTTATGCTCACTGAGAAGAAGAAATCATGTGAAGCTGTTCAGAGGCTACGATTGGCTTTTCCTGCAGTTCCAATATATGCCAGAGCTCGAGATCTAAAACATCTTTTAGATCTAAAGAAAGCAGGTGCGACGGATGCCACTATGGAAAATGCAGAGACTAGCTTACAACTTGGTTCTAAGTTGCTGAAAGGCCTGGGGATGATGTCCGATGATGTAGCATTTTTGAGCCAGCTTGTTAGAGACAATATGGAGCTACAAGCTGAGGTAGCAGTCAGCCTACCAGATTACCGGGAATCAAAGATCATGGAACCACTGCAGGTGAGAGTTGCTGATATAAAGGAGTCACGCATTCCGGTGGCAGCTACTACACCAAAATATGAATTATCAGTACAGAACCAGAAAGATCAAGCTTCGTTGAGTAGAGTTCAGAAGGGAGCCGATCCTGAAGAAGAAGAAGAAGATTATGAACTAAATCAAGCTGTTAAATTAGAAGGAAATGGTGCTTCGTTTATCAAACAAGATATTGATGAAAGCTCAACGGTTGGATCTCAAGATGATTTAGGACAGCAGAATCTTCCGGAACCATGA	2394	0.4244	MLESLLSCSQTLKGYDLTNQKSPGYSRAASRICRSSKQVPFLCHSTAVSEKFTRRTSLDVPSFSGWKLSYFSKYRPLRWERLQTNATSYDVAGAVEVVNDLGLDTLTFLAVTVFIVPSFKFIKASPILGFFLAGVVLNQFGLIRNLEDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLTQVLLSTLAFTAFELPPNGAVGTQILQFLFHSRSDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRLGSATLGILLLQDIAVVPLLVILPVLESQTMTEESIWPMLAQESLKALGGLGLLSFGAKYILRRVFEVVADTRSSEAFVALCLLTIAGTSLLTQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQVLLREWPNVLALLAGLITIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEDQSDDENKQKDPDMVNFDVNEPVVVLGFGQMGQVLANLLSNPMASEGDSDTIGWPYVVFDIDARVVKEGRKLGFPIIYGDGSSPGVLQSAGISSPKAIMVMLTEKKKSCEAVQRLRLAFPAVPIYARARDLKHLLDLKKAGATDATMENAETSLQLGSKLLKGLGMMSDDVAFLSQLVRDNMELQAEVAVSLPDYRESKIMEPLQVRVADIKESRIPVAATTPKYELSVQNQKDQASLSRVQKGADPEEEEEDYELNQAVKLEGNGASFIKQDIDESSTVGSQDDLGQQNLPEP	797

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi436g00005	797	MobiDBLite	consensus disorder prediction	774	797	-	-
	Vivi436g00005	797	MobiDBLite	consensus disorder prediction	730	758	-	-
	Vivi436g00005	797	SUPERFAMILY	NAD(P)-binding Rossmann-fold domains	526	664	IPR036291	-
	Vivi436g00005	797	Gene3D	-	523	692	-	-
	Vivi436g00005	797	Gene3D	-	100	499	IPR038770	-
	Vivi436g00005	797	PANTHER	K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC	79	746	-	-
	Vivi436g00005	797	MobiDBLite	consensus disorder prediction	770	797	-	-
	Vivi436g00005	797	Pfam	Sodium/hydrogen exchanger family	107	492	IPR006153	GO:0006812\|GO:0015297\|GO:0016020\|GO:0055085\|GO:1902600
	Vivi436g00005	797	FunFam	Glutathione-regulated potassium-efflux system protein KefB	523	694	-	-
	Vivi436g00005	797	ProSiteProfiles	RCK N-terminal domain profile.	525	657	IPR003148	GO:0006813

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi436g00005	6	760	Inorganic Solute Cotransporters	AT4G04850	67.181	0.0	960

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vivi436g00005	K03455		-	gmx:100798214	1114.37

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