Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi436g00005 ATGTTGGAGTCTTTACTATCTTGTTCCCAAACCCTCAAGGGATATGACTTGACCAATCAAAAGAGTCCCGGCTATTCTCGTGCTGCTTCGCGAATTTGTAGAAGTTCTAAGCAAGTTCCGTTTCTATGTCATAGTACTGCTGTATCAGAGAAATTCACTAGAAGAACGTCTCTGGATGTTCCTTCATTTTCTGGTTGGAAATTATCCTATTTCTCTAAGTATAGGCCACTAAGGTGGGAACGGTTACAAACAAATGCTACGTCATATGATGTTGCTGGAGCTGTTGAAGTTGTCAATGATTTAGGATTGGATACTCTTACTTTCTTGGCTGTTACCGTTTTTATCGTCCCGTCGTTCAAGTTTATTAAAGCCAGTCCTATACTTGGTTTCTTCCTTGCTGGGGTGGTGCTTAATCAGTTTGGTTTAATTAGGAACCTTGAAGATGTTAAAGTTTTGTCTGAATGGGGGATCCTTTTCTTGCTGTTTGAGATGGGTTTGGAACTTTCACTAGCACGTTTGAAAGCTCTTGCAAAATATGCTTTCGGAATGGGATTGACTCAGGTTTTACTATCTACTTTAGCATTCACTGCTTTTGAGCTTCCACCAAATGGGGCTGTTGGAACTCAAATTTTGCAATTCCTTTTCCACTCAAGGTCTGATCTGGTGAACATCAGAAGTGTCGACGAAGCTGTAGTGATTGGAGCTGCTCTCTCTCTGTCATCTTCTGCATTTGTTCTACAGCTTCTTGCAGAGAAAGGTGAGCTTCCTACAAGGCTTGGTTCAGCAACTCTTGGGATACTTCTTTTGCAGGACATAGCTGTTGTCCCTCTTTTGGTTATACTTCCAGTACTTGAGAGCCAGACTATGACTGAGGAAAGTATTTGGCCCATGCTTGCTCAAGAAAGTTTGAAGGCATTAGGTGGATTGGGTCTGCTTTCATTTGGAGCAAAGTATATCCTCAGAAGAGTTTTTGAGGTTGTTGCAGATACAAGAAGTTCAGAGGCTTTTGTTGCTCTTTGCTTGCTGACTATTGCTGGGACTTCACTACTCACACAGAAACTGGGCTTCAGTGATACGCTTGGAGCATTTTTAGCTGGGGCAATCCTAGCAGAGACAAATTTCAGGACCCAGATTGAAGCAGACATAAGACCATTTAGAGGCTTGCTGCTCGGATTGTTTTTTCTAACTACAGGGACTTCAATAGACATGCAGGTTCTCTTGCGAGAGTGGCCAAACGTACTTGCGCTCTTGGCGGGTTTAATCACGATCAAAACATTGATCATAACTGCGATTGGTCCTCGTGTTGGCCTTACTTTACAAGAAAGTGTAAGAATAGGATTGCTTCTATCCCAAGGAGGGGAGTTTGGATTTGTAGTATTCTCTTTGGCGAATAGACTTGGGGTGCTTCCACTCGAGCTTAACAAACTGCTCATAATTGTTGTTGTATTGTCAATGGCGCTAACCCCATTTCTGAATGAAGCTGGAAGGAGGGCTGCTAGCTTTATTGAAGATCAATCTGATGACGAGAATAAACAGAAAGATCCTGATATGGTTAATTTCGATGTTAATGAACCTGTTGTCGTCCTTGGATTTGGACAAATGGGCCAGGTCCTTGCTAATTTGCTGTCCAACCCAATGGCTTCAGAAGGAGATAGTGATACAATAGGATGGCCTTATGTGGTATTTGATATTGACGCCAGGGTTGTAAAGGAAGGTAGAAAACTTGGCTTTCCTATTATCTATGGGGATGGATCAAGTCCAGGTGTTCTTCAATCTGCCGGTATCTCATCTCCAAAAGCTATCATGGTTATGCTCACTGAGAAGAAGAAATCATGTGAAGCTGTTCAGAGGCTACGATTGGCTTTTCCTGCAGTTCCAATATATGCCAGAGCTCGAGATCTAAAACATCTTTTAGATCTAAAGAAAGCAGGTGCGACGGATGCCACTATGGAAAATGCAGAGACTAGCTTACAACTTGGTTCTAAGTTGCTGAAAGGCCTGGGGATGATGTCCGATGATGTAGCATTTTTGAGCCAGCTTGTTAGAGACAATATGGAGCTACAAGCTGAGGTAGCAGTCAGCCTACCAGATTACCGGGAATCAAAGATCATGGAACCACTGCAGGTGAGAGTTGCTGATATAAAGGAGTCACGCATTCCGGTGGCAGCTACTACACCAAAATATGAATTATCAGTACAGAACCAGAAAGATCAAGCTTCGTTGAGTAGAGTTCAGAAGGGAGCCGATCCTGAAGAAGAAGAAGAAGATTATGAACTAAATCAAGCTGTTAAATTAGAAGGAAATGGTGCTTCGTTTATCAAACAAGATATTGATGAAAGCTCAACGGTTGGATCTCAAGATGATTTAGGACAGCAGAATCTTCCGGAACCATGA 2394 0.4244 MLESLLSCSQTLKGYDLTNQKSPGYSRAASRICRSSKQVPFLCHSTAVSEKFTRRTSLDVPSFSGWKLSYFSKYRPLRWERLQTNATSYDVAGAVEVVNDLGLDTLTFLAVTVFIVPSFKFIKASPILGFFLAGVVLNQFGLIRNLEDVKVLSEWGILFLLFEMGLELSLARLKALAKYAFGMGLTQVLLSTLAFTAFELPPNGAVGTQILQFLFHSRSDLVNIRSVDEAVVIGAALSLSSSAFVLQLLAEKGELPTRLGSATLGILLLQDIAVVPLLVILPVLESQTMTEESIWPMLAQESLKALGGLGLLSFGAKYILRRVFEVVADTRSSEAFVALCLLTIAGTSLLTQKLGFSDTLGAFLAGAILAETNFRTQIEADIRPFRGLLLGLFFLTTGTSIDMQVLLREWPNVLALLAGLITIKTLIITAIGPRVGLTLQESVRIGLLLSQGGEFGFVVFSLANRLGVLPLELNKLLIIVVVLSMALTPFLNEAGRRAASFIEDQSDDENKQKDPDMVNFDVNEPVVVLGFGQMGQVLANLLSNPMASEGDSDTIGWPYVVFDIDARVVKEGRKLGFPIIYGDGSSPGVLQSAGISSPKAIMVMLTEKKKSCEAVQRLRLAFPAVPIYARARDLKHLLDLKKAGATDATMENAETSLQLGSKLLKGLGMMSDDVAFLSQLVRDNMELQAEVAVSLPDYRESKIMEPLQVRVADIKESRIPVAATTPKYELSVQNQKDQASLSRVQKGADPEEEEEDYELNQAVKLEGNGASFIKQDIDESSTVGSQDDLGQQNLPEP 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi436g00005 797 MobiDBLite consensus disorder prediction 774 797 - -
Vivi436g00005 797 MobiDBLite consensus disorder prediction 730 758 - -
Vivi436g00005 797 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 526 664 IPR036291 -
Vivi436g00005 797 Gene3D - 523 692 - -
Vivi436g00005 797 Gene3D - 100 499 IPR038770 -
Vivi436g00005 797 PANTHER K(+) EFFLUX ANTIPORTER 3, CHLOROPLASTIC 79 746 - -
Vivi436g00005 797 MobiDBLite consensus disorder prediction 770 797 - -
Vivi436g00005 797 Pfam Sodium/hydrogen exchanger family 107 492 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
Vivi436g00005 797 FunFam Glutathione-regulated potassium-efflux system protein KefB 523 694 - -
Vivi436g00005 797 ProSiteProfiles RCK N-terminal domain profile. 525 657 IPR003148 GO:0006813
Vivi436g00005 797 Pfam TrkA-N domain 526 648 IPR003148 GO:0006813
Vivi436g00005 797 FunFam K(+) efflux antiporter 3, chloroplastic 100 499 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi436g00005 6 760 Inorganic Solute Cotransporters AT4G04850 67.181 0.0 960
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi436g00005 K03455 - gmx:100798214 1114.37