Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi435g00009 ATGACAGACATGTCTCTTAACAACAATCATTTAACTGGAGAAATACCAGATGCGTTTCAGTCATTTACACAATTGATCAATCTAGATTTATCTAGTAATAATCTGAGTGGGGAACTGCCTCCTTCGGTGGAGAATTTGTCATCTTTGACCACCCTACGCTTGCAGGATAATCAACTATCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATGTCGAGAACAACCAATTTGTTGGCCCAATACCTCCAAAGCTGCTAAGTATCCCTAACTTCAGACAAGCTGGAAATCCATTTAATGATAATACCACGGTAACTCCTGCTCCTCCACCTCGCTCCCCAGTAACAGCACCGCCAGGAGCACCTCCCGGAGAACCTTCAGGAGCACCTCCAGGAACACCGCCAGGAGCACCATTTTTTGTTGTACCATCTGGTCCTGGTCGTGTACCTCCTAAAAAGGCTGATGGACCAACTGCAGCGGTTGAGTCAAATTCTGGGAAATCAAACAAACATACCAAAAGGGTAGTTTTAATATCTATTGGCAGTGTTTTGGCATTCATAATTTTGGTACTAGCACTCGTTCTATTTATTCCAAGATGTGGTAAAAGGGAACGAGTTGACCGAAGGTCCAAACGACATCAAATTGGTGCTTTTGGAGGTGAAAGGCAACAAAATCCTAGGGATTTAGGGGCTATAGTCCTACCACCTAATCAAACAGACAAAGTACCGACCCGTGATGTCTTGAGGCCAAATAACGACCGCCAAGAAGAGCCTAGGAGAGCGTGGGCTGTTCCGATTCCAAATGCACAGGATAAGAAAGAGAAGGATGTGCCAAGAATGGCGACAATACCAAAGCCGAGAGATCATGAGATTGATATGAGTACACCAGAAGTTTATTTTGTGCCTCCGCCGCCGCCGCCGCCGCCGCCCCCTCCTCCTCCTCTGCCACCGCCACCCCCACCTCCTCCTCCCCCTCCTACTATGAGGATGATTGTTGAGCCAGCCATTCCCAACAGAGGGACTAATGTTAATCCATCCTTAAGAAGTTCAATTTTTCCTCCTACTTTTGCAAAATCTTTCACCATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGTTGGGCACTGTGTACAGGGCAGAGCTTCCTGATGGGAAGTTGTTTGCTGTAAAGAAACTAGACAAAAGAACCTCTGTTCACCAGAAGGATGATGAGTTTCTTGAATTGATTAATAATATTGACAGAATAAGACATACAAATATTGTTGAGCTTATTGGATACTGTTCAGAGCATGGACAAAGGCTTCTGATCTATGAGTACTGCAGTAACGGGTCACTATATGATGCACTCCACTCAGATGATGAATTCAAAGCAACACTATCATGGAATACTCGCATTCGGATGGCACTTGGTGCAGCTAGAGCCTTAGAATATTTGCATGAGCAATGTCAGCCCCCTGTGGTACACAGAAATTTGAAGTCCGCCAATGTTCTCCTTGATGATGATCTATCTGTGCGTGTATCTGATTGTGGTTTAGCTCCATTAATAGCTTCAGGTTCTGTAACTCAGCTCTCGGGTAACCTGCAATCAGCTTACGGTTATGGAGCTCCAGAGTTTGAATCAGGAACTTACACTTACCAAAGTGACGTTTACAGTGTTGGAGTTGTTATGTTAGAACTTTTAACCGGCCGTCAGTCCCATGACAGCACACGTCCACGAGGGGAGCAATTTCTTGCTAGATGGGCGATTCCCAAACTTCACGATATCGATGCATTATCAAAAATGGTCGACCCTTCTTTAAATGGAGTTTACCCTGCAAAGTCATTGTCAAATTTCGCAGACATTATTTCACGATGCCTTCAGCCGGAGCCTGAATTTAGACCAGCAATGTCAGAAGTTGTCTTATACTTACTAAATATGATAAAGAGGGAGTCTCAGAAAAGTGATTCAAATGAAAAATGA 1998 0.4394 MTDMSLNNNHLTGEIPDAFQSFTQLINLDLSSNNLSGELPPSVENLSSLTTLRLQDNQLSGTLDVLQDLPLKDLNVENNQFVGPIPPKLLSIPNFRQAGNPFNDNTTVTPAPPPRSPVTAPPGAPPGEPSGAPPGTPPGAPFFVVPSGPGRVPPKKADGPTAAVESNSGKSNKHTKRVVLISIGSVLAFIILVLALVLFIPRCGKRERVDRRSKRHQIGAFGGERQQNPRDLGAIVLPPNQTDKVPTRDVLRPNNDRQEEPRRAWAVPIPNAQDKKEKDVPRMATIPKPRDHEIDMSTPEVYFVPPPPPPPPPPPPPLPPPPPPPPPPPTMRMIVEPAIPNRGTNVNPSLRSSIFPPTFAKSFTIASLQQYTNSFSQENLIGGGMLGTVYRAELPDGKLFAVKKLDKRTSVHQKDDEFLELINNIDRIRHTNIVELIGYCSEHGQRLLIYEYCSNGSLYDALHSDDEFKATLSWNTRIRMALGAARALEYLHEQCQPPVVHRNLKSANVLLDDDLSVRVSDCGLAPLIASGSVTQLSGNLQSAYGYGAPEFESGTYTYQSDVYSVGVVMLELLTGRQSHDSTRPRGEQFLARWAIPKLHDIDALSKMVDPSLNGVYPAKSLSNFADIISRCLQPEPEFRPAMSEVVLYLLNMIKRESQKSDSNEK 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi435g00009 665 Pfam Leucine rich repeat 3 59 IPR001611 GO:0005515
Vivi435g00009 665 Gene3D Transferase(Phosphotransferase) domain 1 453 665 - -
Vivi435g00009 665 Pfam Protein tyrosine and serine/threonine kinase 378 647 IPR001245 GO:0004672|GO:0006468
Vivi435g00009 665 MobiDBLite consensus disorder prediction 249 263 - -
Vivi435g00009 665 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 341 452 - -
Vivi435g00009 665 SUPERFAMILY Formin homology 2 domain (FH2 domain) 319 329 - -
Vivi435g00009 665 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 3 659 IPR046959 -
Vivi435g00009 665 MobiDBLite consensus disorder prediction 299 333 - -
Vivi435g00009 665 SUPERFAMILY L domain-like 4 95 - -
Vivi435g00009 665 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 453 663 - -
Vivi435g00009 665 ProSiteProfiles Protein kinase domain profile. 375 649 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi435g00009 665 MobiDBLite consensus disorder prediction 301 333 - -
Vivi435g00009 665 MobiDBLite consensus disorder prediction 107 148 - -
Vivi435g00009 665 SUPERFAMILY Protein kinase-like (PK-like) 351 649 IPR011009 -
Vivi435g00009 665 MobiDBLite consensus disorder prediction 94 173 - -
Vivi435g00009 665 Gene3D Phosphorylase Kinase; domain 1 344 452 - -
Vivi435g00009 665 Gene3D Ribonuclease Inhibitor 1 108 IPR032675 -
Vivi435g00009 665 MobiDBLite consensus disorder prediction 220 264 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi435g00009 1 660 Strubbelig Receptor Gene Family AT4G03390 59.009 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Vivi435g00009 PK_Tyr_Ser-Thr 1.4e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi435g00009 - - mtr:25492087 1025.77