Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi434g00015 ATGGCCAAAAACAAAGACAAAGCAAGTTCTGATTCTGAAAATTCTTTATTTTCAACAGCTTCAAACTCCTCAATGGGTAATAACTATAGATATATGTTTAGTAGATTATTCAGGTTTGCCAATTCATGGAAGAAAAGTAGCACACCAAGAGGTAGAAGAATTTTTCACAGAGATGTTGAAAAAGAAGAATTCCAATATGCTAGTAGTCACTGTCTTTCATCCTATTACAGTGTTTTTGTGGTTAGATTAGCAATCATGGTAATGCTAGCAATCTTGATAGGGCTATTGACCATACTAACATGGCATTTTACAAAGATTTATACCGCGAAATCACTGAGTAGTTTAGCGTATGGTTTGCGCTACGAACTTCTGCAGCGTCCAATTTTGAGGATGTGGAATATTTTGAACTCTACTTCTGAAATTACAACAGCTCAAGTCAAGTTGTCTCAGTATGTAATCAGACGTTATAGCAATCCTGCAAGTCAAGCAGAGCAAGTTGAGCTATATGAAGCAATGAGAGCTGTAACATGGTCACTGTTTGCAAGTAGAAAAGCTCTAAACTCGATAACAATAAATTACAAGAATGGATTTGTTCAAGCATTCCATAGAGATCTAAAAGACAACAACACATTTTACATCTACTCAGATCTTTCAAATTACTCAATGGTTGCAACAACCTCAAACATGGTCAATACCATCTCAACTCATCAAGCTTGGGATGACAAAACAATTCATGGAAACTTCTCAGCAATTTGGTATAGAGAACCACTTGATCCCGTCACAGGCGAAAAAATCGGAAAAGCAATGAAAATTGCACCAGAAGATTTAATCAACATCGCAGGACTTTCACAAGTTCCTGATGGTGTAGCTACATGGCATGTAGCAGTTAGTAAATTTACAGATTCGCCTTTGCTTTCAGCAGCGTTACCTGTTTGGGATTCTTCGAACAAAAGTATTATGGCTGTTGTTGGTGTTACAACTGCATTTTATAGTGTTGGACAGTTAATGAGAGAACTTGTTGAGATGCATAGTGGTCACATGTATTTGACTTCACAACAAGGCTATTTGCTCGCAACTTCTACAAATGCACCTTTACTTACGAATTCAACTAAGCCGCCACCTAAGCTTAAGATGGCTGTGGATTGTGAAGATGGTATAATAAAACTTGGTGCTGAGTGGTTGCAGAGAACTTATGGGAATCATTTTCCTAATTCAACTCATGAGGTTCATGTGGAGAATGCTAAACTAGGTCACCAGGAATATTATATTGACTCATTCTACCTAAACTTGAAGAGACTTCCTTTGGTAGGTGTAATAATCATACCGAGAAAGTATATAATGGGACAGGTGGATGAGAGAGCCTTCAAAACTTTGGTTATTCTGATATCAGCAGCTCTGTGTATTTTAGTCATTGGATGTGTTTGCATTTTGATATTGACAAATGGAGTGTCAAAGGAAATGAACCTCAGAGCAGAACTGATAAGTCAACTTGAAGCAAGAAGGAAGGCAGAAGCATCAAGCAACTATAAAAGTCAGTTCCTTGCAAATATGAGTCATGAACTAAGAACACCAATGGCAGCAGTAATTGGATTGCTGGACATTCTTATATCTGATGATTGTCTCACAAATGAACAATATTCAACAGTTACTCAAATAAGAAAATGTTCAACAGCTCTACTCCGTCTTCTTAACAACATATTGGATCTAAGCAAGGTGGAATCAGGAAAACTTGTACTAGATGATGCAGAATTTGACCTGGGACGTGAACTTGAAGGGCTTGTAGATATGTTTTCTGTTCAATGCATTAATCATAATGTAGAGACTGTTTTAGACCTTTCTGATGATATGCCAAAAGTAGTTAGGGGTGACTCTGGTAGGGTTGTTCAAGTGTTTGCAAATTTGATCAACAATTCAATTAAGTTTACTACATCTGGTCATGTTATTCTGCGAGGATGGTGCGAATATCCAAAATCTTGCGATAGTCCAAATTTTTATCTTGATCAGAAGAAATCAAGGATTGTACAAAAGAACAAAGAGAAGCCAAATGCAAATCATGCAAGGAGAATATCTATGAGAGATAACAAGAATGTGATACTTTGGTTTGAAGTTGAGGATACAGGCTGTGGTATTGATCCCAGCAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAGGCTGATCCATCGACTACCCGACTTCATGGAGGAACTGGTCTTGGTCTTTGCATTGTTAGGAACTTGGTTAATAAGATGGGTGGAGAAATCAAGGTTACCAGAAAGGAGGGTCAAGGAACATTGATGAGATTATGCTTGCTTCTCAGTGCACCAATTGATGCCACAGAACAACATTGTCCATTAAATTTGACAGACAATGGCTTAGTGGTATTGCTTGCACTACAAGGCAACATGAGTAGATTAGTAACATCAAAGTGGTTAACCAAAAAAGGAGTGTGCACAATGGAAGCATCTGAATGGAACGGACTGACTCAAGTTTTAAGGGAACTCTTTCATGCAAGAAGTTCAATCCATAATAACAACAACTTTGATGCACATTACCCAATAAATCTTGAAGGATTCAAGTCCAAACTACTCACCATAAAAGACATGAGAAACCCAATTTTTGTCATTGTTGTTGACATTGGTTTACTTGACTTAAGCACGGATATATGGAAGGAACAACTTAACTTCCTTCACAAGTATTTTGGAAGAGCGAAATTTGTATGGATGTTAAACCATGACACACCAAATACCATAAAGATGGAGCTTCGTAGGAAAGGTCACTTATTAATGGTTAACAAGCCTCTTTACAAAGGAAAAATGATTCATATTTTGGAAGCTGTTATGAAAAACAGAAATATTGAGTTACAAAAGAAAAACATGAAAGAGGGAGATTTGCACGAGTTCCTTGAGATTGATTCAACTCATTTTGACGCTGCTACTAGCTCTGATGATTCAGACATATCTGAAGTTAGCGAAAAACCAATTTTAAACCTAACCAATGAAAAAGAACATTTGGAAGAAAAAAATCTTAGGAAAGAAGAATCTTGTTCTTCATTTTCCACTGAAAAACATGAAAAATTTGAATGTGACGGAACAAATAGGGCAACAAGGTCGAGAAAAGAACCAAATGATAAGAAATCACTCGAGGGATTAAGGATTTTGCTTGCAGAAGATACACCTGTAATTCAAAGGGTAGCAACTATAATGCTTGAAAAAATGGGAGCCGTTGTTGTCGCTGTAGGTGATGGACAACAAGCAGTAGATGCTCTCAACTACATGGTAAGTGCCGAAGATTGTAGAAGAGAGTCTCTTCAGAAGGAAAGAAATACACGATCACAAAGTGAGATTTTGTCTTGTCATCCATATGACTTGATCCTAATGGATTGTCAGATGCCGAAGATGGATGGATATGAAGCAACAAAAGCGATAAGAAAATCAGAAGAAGGAACAGGAAAGCACATACCGATTGTTGCTCTAACAGCGCACGCAATGTCGTGCGATGAAGCCAAATGCCTTAAGGTTGGCATGGATGCTTACTTAACAAAGCCAATTGATTTCAAGCTTATGGTCTCCACCATTCTCTCACTCACCAAACCAACATCTTGA 3603 0.3761 MAKNKDKASSDSENSLFSTASNSSMGNNYRYMFSRLFRFANSWKKSSTPRGRRIFHRDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTAKSLSSLAYGLRYELLQRPILRMWNILNSTSEITTAQVKLSQYVIRRYSNPASQAEQVELYEAMRAVTWSLFASRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLSNYSMVATTSNMVNTISTHQAWDDKTIHGNFSAIWYREPLDPVTGEKIGKAMKIAPEDLINIAGLSQVPDGVATWHVAVSKFTDSPLLSAALPVWDSSNKSIMAVVGVTTAFYSVGQLMRELVEMHSGHMYLTSQQGYLLATSTNAPLLTNSTKPPPKLKMAVDCEDGIIKLGAEWLQRTYGNHFPNSTHEVHVENAKLGHQEYYIDSFYLNLKRLPLVGVIIIPRKYIMGQVDERAFKTLVILISAALCILVIGCVCILILTNGVSKEMNLRAELISQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLDDAEFDLGRELEGLVDMFSVQCINHNVETVLDLSDDMPKVVRGDSGRVVQVFANLINNSIKFTTSGHVILRGWCEYPKSCDSPNFYLDQKKSRIVQKNKEKPNANHARRISMRDNKNVILWFEVEDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGEIKVTRKEGQGTLMRLCLLLSAPIDATEQHCPLNLTDNGLVVLLALQGNMSRLVTSKWLTKKGVCTMEASEWNGLTQVLRELFHARSSIHNNNNFDAHYPINLEGFKSKLLTIKDMRNPIFVIVVDIGLLDLSTDIWKEQLNFLHKYFGRAKFVWMLNHDTPNTIKMELRRKGHLLMVNKPLYKGKMIHILEAVMKNRNIELQKKNMKEGDLHEFLEIDSTHFDAATSSDDSDISEVSEKPILNLTNEKEHLEEKNLRKEESCSSFSTEKHEKFECDGTNRATRSRKEPNDKKSLEGLRILLAEDTPVIQRVATIMLEKMGAVVVAVGDGQQAVDALNYMVSAEDCRRESLQKERNTRSQSEILSCHPYDLILMDCQMPKMDGYEATKAIRKSEEGTGKHIPIVALTAHAMSCDEAKCLKVGMDAYLTKPIDFKLMVSTILSLTKPTS 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi434g00015 1200 Coils Coil 994 1014 - -
Vivi434g00015 1200 CDD HisKA 510 571 IPR003661 GO:0000155|GO:0007165
Vivi434g00015 1200 ProSiteProfiles Response regulatory domain profile. 1051 1196 IPR001789 GO:0000160
Vivi434g00015 1200 SUPERFAMILY CheY-like 1048 1196 IPR011006 -
Vivi434g00015 1200 CDD REC_hyHK_CKI1_RcsC-like 1052 1192 - -
Vivi434g00015 1200 Gene3D - 1029 1196 - -
Vivi434g00015 1200 PANTHER TWO-COMPONENT HISTIDINE KINASE 63 777 - -
Vivi434g00015 1200 SMART REC_2 1050 1192 IPR001789 GO:0000160
Vivi434g00015 1200 Pfam Response regulator receiver domain 1111 1191 IPR001789 GO:0000160
Vivi434g00015 1200 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 622 772 IPR003594 -
Vivi434g00015 1200 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 564 770 IPR036890 -
Vivi434g00015 1200 SMART HisKA_10 509 575 IPR003661 GO:0000155|GO:0007165
Vivi434g00015 1200 FunFam Histidine kinase 1-like protein 497 576 - -
Vivi434g00015 1200 Gene3D - 577 774 IPR036890 -
Vivi434g00015 1200 PRINTS Bacterial sensor protein C-terminal signature 734 752 IPR004358 GO:0016310|GO:0016772
Vivi434g00015 1200 PRINTS Bacterial sensor protein C-terminal signature 699 713 IPR004358 GO:0016310|GO:0016772
Vivi434g00015 1200 PRINTS Bacterial sensor protein C-terminal signature 717 727 IPR004358 GO:0016310|GO:0016772
Vivi434g00015 1200 ProSiteProfiles Histidine kinase domain profile. 516 774 IPR005467 -
Vivi434g00015 1200 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 497 576 IPR036097 GO:0000155|GO:0007165
Vivi434g00015 1200 Gene3D - 497 576 - -
Vivi434g00015 1200 Pfam His Kinase A (phospho-acceptor) domain 510 575 IPR003661 GO:0000155|GO:0007165
Vivi434g00015 1200 SMART HKATPase_4 622 774 IPR003594 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi434g00015 30 1200 Histidine Kinase Gene Family AT2G17820 65.462 0.0 1568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi434g00015 HATPase_c 6.8e-24 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi434g00015 - - gmx:100814068 1922.9