Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi431g00009 ATGGAGCTTCTCCACTCCGACGAAACCGTGTCGGAAGATGCTGATATTCCTGAGGATGACAACACCACAAACGATTCACCAAACCCCACCGCCGGGATCGAAGACGGCGCGACTCTCGATGTATCAGGGAAGAACTTAGAGTTTCCGGCGCCGGAGAATTCCAAAGACGATGCCGTGGAGAGTTTATACATGTACAAGAATGTTTACAGTTTGATTCCGAAGTCGGTGGGTGGTCTCGTGAGATTGAAAACGCTGAAATTCTTTGGGAATGAGATTAACTTGTTCGCACCGGAGTTCGGTAATATGACGAAGTTGGAGAGGTTGCAGATGAAGGTAGCTTCACCTGGAATTGGTGGGTTGCCGTTGCATAAATTGAAGGGTTTGAAAGAGCTTGAGCTTTCCAAAGGTCCTTCTCGACCTTCTGCGTTTCCTATATTGACTGAGATTGCTGCTCTCAAGTGTTTGACCAAACTTTGCATTTGTCACTTCTCTATTAGATACCTTCCTCCGGAAATTGGGTGCTTAAAGAGTTTGGAGTATCTTGATCTTTCATTCAATAAATTGAAGACATTGCCCTCAGAGATTACTTCTTTGGAAGCATTAATAACCATGAAAGTTGCTAATAATAAGTTGGTGGAATTACCGCCGGGTATGACATCACTATCGAGGCTGGAGAATCTGGACCTGTCAAATAATAGGTTGACTTCGTTAGGATCCCTTGAACTTAGCTCGATGAATAGACTTCAGAACTTAAATCTTCAGTACAACAAGCTGCCCAGCATTTTTCAAATTCCTTCATGGATATGCTGTAATATGGAAGGAAATGATGGAGATAGATGCAAAGACAATTATAGCAGTTCTTCTGTTGAAATGGATGTCTATGAAAGCAATTTACAGGAAAATGAGGAAACCTTTTCTCATGGACCTCATAACACCTCATCTAGCATATTAACAAACTCCTCATCTAACAGTAGATGTTTTTCAGCCTGGAAGTCAGGTAAACGGTGGAAGCGGCGACACTATAAACATCAGAAAGCCCGTCAAGAACAGAAAGCTCGTCAAGAGCGGTTGAGTAACAGCAGGAAATGGAAAGGTGTAGATCATGACCAATTGTTAAGCAAGAAGATCCACAGAATTTCTGAACCAGAAAATCTGGATACTCTTGTCTCTGAAAATTGCACAGAAACTATACCTGACAATGGGAGCTTGGATGACAATCATAAAAAAATATTCTCCGAAGAAGCAGCGCATGAAAGTTTAATTGATAATGTTGACAATGATGAGGAAATTATTGAAAAGCAGTTTTCTCAAGAAGATTGCTGCACTGCGGAAGGTAAAGATGAAATAGATGCATCCTCATGCTCCTTAGACAATGGCCGAAGTGAACAGGATGGAGCATCTTGTTCAGTTTTTTCGAAGTGTAGTTTTAAATCAAAGAGGCATTCAGAACGGGATCTTGATAATCCTAAACCCCGCAAGTCTAGAAAACCTATTAGTGATGGCTCATTATTGTCTTCCAAATACAGTAAAATTTCATTTTGTGGCACCGAGGACCATCTATCAGATGGCTTTTATGATGCGGGACGTGATCGGCCGTTTATGCCTCTTGAGAGTTACGAGCAAAATCAGTGTCTTGCTTCTCGTGAAGTCATTCTGTTAGACAGACAAAGGGATGAAGAATTGGATGCCATTATTCTATCAGCTCAGGCATTGGTATCTAATTTAAAGCAGTTAAATGGTTTAAACAAACCTGGGAGCCAGGGTGAAGTTGATAACTTGCAGACAGCATCACTGCTTGCACTCTTTGTATCTGATCATTTTGGTGGAAGTGATAGAGGTGCTATTGTAGAAAAGACACGCAAGTCTGTTTCTGGCTCAAACTATAATAAGCCTTTTGTCTGTACATGCTCGGCAGGAAGCAGAACAAGTATAAATGCTGCAACTGAATCAGTTGCGAATGCCATAGGAAATATTAATCTTTCTAGGATCTCTGAAAAATCTCTTGATTCTATTAAAAAAAGGCGAAACTCAATTATTGTTCCGATTGGCTCTGTTCAGTATGGTGTTTGTAGGCATAGAGCTCTGCTTTTTAAGTATTTATGTGATCACATGGAGCCACCTATACCTTGTGAGCTTGTTAGGGGTTACCTGGATTTTTCACCACATGCTTGGAATATCATTCTAATAAAAAAGGGTGTTACATGGGTTCGAATGCTTGTTGATGCTTGCCGACCTCATGATATTAGAGAAGAGAAAGATCCAGAATATTTCTGCAGGTACATACCTCTTCGTCGAACCCAAATTCCTCTTTCAACTGGCATTCTTCCTAGTCCTGATTATTCCTTTCCATCTCTATCTAATTGTGATGAACTTGAGAAAAAAGCTTTAACTACATTAGTTCGGTGCAAGTATGGATCAGTTGAGGCTGCAGTGAAGGTGCGTACTTTGGAAGTACAGGATAGTTCAGCAGACAAAATAAAAAACTTCGAATATAATTCTTTGGGAGAAATCAGAATTCTTGGTGCTTTCAAACACCCCTGTATAGTGGAAATATACGGACACCAAATATCTTGCAAATGGACCATCTCAGCTGATGGTAACCCTGAGCATCGTGTGTTGAGATCTGCAATTTTTATGGAATATGTGGAAGGAGGCTCCTTAAAATCTTATCTAGAAGAGCTGTCAAAAGCTGGTGAAAAGCATGTTCCTGTGGAGTTAGCCTTGCATATTGCCAAAGATGTCTCATGCGCTTTGTCGGAGCTGCATTCAAAGCACATAATTCATCGTGACATAAAAAGCGAAAACATTCTGTTTGATTGTGATAGGAAGAGAGATGATGGAACTCCCACTGTGAAGCTCTGTGATTTTGATAGTGCAGTGCCGCTAAGATCACCTTTACATGCATGCTGTATTGCTCATGTAGGATCACCTCCTCCTTGTGTGTGTGTTGGAACACCTCGATGGATGGCTCCAGAGGTCATGCGGACTATGTATGAAAAAAATACTTATGGATTGGAAGCTGATATTTGGTCATTTGGATGTTTACTGCTGGAGATGCTGACTTTGCAAATTCCTTATTTTGGAGTACCTGATTTACACGTCCATGATAGTCTGCAGATGGGTAAACGGCCACAACTAACTGAAGAGCTGGAGGCGTTAAGCTCAACAAATGAACCTACGATGATTCAATCCGGTGAAGAGCTTGAAAAATCAGATGCTGAGACAAACACATTGGAGTTCCTTGTCGATTTGTTTCACAGGTGTGTCGAAGAAAATCCAAACGACCGACCTACTGCCAAAGAAATCCATGAAATGCTGGTTGGACACACAAGGCATACAAGTTCAAAATGTTAG 3354 0.4112 MELLHSDETVSEDADIPEDDNTTNDSPNPTAGIEDGATLDVSGKNLEFPAPENSKDDAVESLYMYKNVYSLIPKSVGGLVRLKTLKFFGNEINLFAPEFGNMTKLERLQMKVASPGIGGLPLHKLKGLKELELSKGPSRPSAFPILTEIAALKCLTKLCICHFSIRYLPPEIGCLKSLEYLDLSFNKLKTLPSEITSLEALITMKVANNKLVELPPGMTSLSRLENLDLSNNRLTSLGSLELSSMNRLQNLNLQYNKLPSIFQIPSWICCNMEGNDGDRCKDNYSSSSVEMDVYESNLQENEETFSHGPHNTSSSILTNSSSNSRCFSAWKSGKRWKRRHYKHQKARQEQKARQERLSNSRKWKGVDHDQLLSKKIHRISEPENLDTLVSENCTETIPDNGSLDDNHKKIFSEEAAHESLIDNVDNDEEIIEKQFSQEDCCTAEGKDEIDASSCSLDNGRSEQDGASCSVFSKCSFKSKRHSERDLDNPKPRKSRKPISDGSLLSSKYSKISFCGTEDHLSDGFYDAGRDRPFMPLESYEQNQCLASREVILLDRQRDEELDAIILSAQALVSNLKQLNGLNKPGSQGEVDNLQTASLLALFVSDHFGGSDRGAIVEKTRKSVSGSNYNKPFVCTCSAGSRTSINAATESVANAIGNINLSRISEKSLDSIKKRRNSIIVPIGSVQYGVCRHRALLFKYLCDHMEPPIPCELVRGYLDFSPHAWNIILIKKGVTWVRMLVDACRPHDIREEKDPEYFCRYIPLRRTQIPLSTGILPSPDYSFPSLSNCDELEKKALTTLVRCKYGSVEAAVKVRTLEVQDSSADKIKNFEYNSLGEIRILGAFKHPCIVEIYGHQISCKWTISADGNPEHRVLRSAIFMEYVEGGSLKSYLEELSKAGEKHVPVELALHIAKDVSCALSELHSKHIIHRDIKSENILFDCDRKRDDGTPTVKLCDFDSAVPLRSPLHACCIAHVGSPPPCVCVGTPRWMAPEVMRTMYEKNTYGLEADIWSFGCLLLEMLTLQIPYFGVPDLHVHDSLQMGKRPQLTEELEALSSTNEPTMIQSGEELEKSDAETNTLEFLVDLFHRCVEENPNDRPTAKEIHEMLVGHTRHTSSKC 1117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi431g00009 1117 MobiDBLite consensus disorder prediction 337 364 - -
Vivi431g00009 1117 SUPERFAMILY Cysteine proteinases 686 744 IPR038765 -
Vivi431g00009 1117 ProSiteProfiles Protein kinase domain profile. 793 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi431g00009 1117 SMART serkin_6 789 1106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi431g00009 1117 MobiDBLite consensus disorder prediction 348 364 - -
Vivi431g00009 1117 FunFam Leucine-rich repeat protein kinase family protein 831 1112 - -
Vivi431g00009 1117 SUPERFAMILY Protein kinase-like (PK-like) 795 1106 IPR011009 -
Vivi431g00009 1117 Gene3D Ribonuclease Inhibitor 25 287 IPR032675 -
Vivi431g00009 1117 MobiDBLite consensus disorder prediction 481 501 - -
Vivi431g00009 1117 SMART LRR_typ_2 79 101 IPR003591 -
Vivi431g00009 1117 SMART LRR_typ_2 245 271 IPR003591 -
Vivi431g00009 1117 SMART LRR_typ_2 221 244 IPR003591 -
Vivi431g00009 1117 SMART LRR_typ_2 175 198 IPR003591 -
Vivi431g00009 1117 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 105 1113 - -
Vivi431g00009 1117 SMART LRR_sd22_2 175 200 - -
Vivi431g00009 1117 SMART LRR_sd22_2 221 242 - -
Vivi431g00009 1117 Pfam Ethylene-responsive protein kinase Le-CTR1 661 741 - -
Vivi431g00009 1117 ProSiteProfiles Leucine-rich repeat profile. 223 244 IPR001611 GO:0005515
Vivi431g00009 1117 PRINTS Leucine-rich repeat signature 178 191 - -
Vivi431g00009 1117 PRINTS Leucine-rich repeat signature 221 234 - -
Vivi431g00009 1117 Pfam Leucine rich repeat 203 258 IPR001611 GO:0005515
Vivi431g00009 1117 ProSitePatterns Serine/Threonine protein kinases active-site signature. 926 938 IPR008271 GO:0004672|GO:0006468
Vivi431g00009 1117 Gene3D Transferase(Phosphotransferase) domain 1 784 1116 - -
Vivi431g00009 1117 SMART LRR_bac_2 221 240 - -
Vivi431g00009 1117 SMART LRR_bac_2 198 217 - -
Vivi431g00009 1117 SMART LRR_bac_2 175 194 - -
Vivi431g00009 1117 MobiDBLite consensus disorder prediction 1 52 - -
Vivi431g00009 1117 Pfam Protein kinase domain 810 1104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi431g00009 1117 MobiDBLite consensus disorder prediction 301 320 - -
Vivi431g00009 1117 ProSiteProfiles Leucine-rich repeat profile. 177 198 IPR001611 GO:0005515
Vivi431g00009 1117 SUPERFAMILY L domain-like 39 266 - -
Vivi431g00009 1117 MobiDBLite consensus disorder prediction 481 497 - -
Vivi431g00009 1117 FunFam Leucine-rich repeat protein kinase family protein 47 291 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi431g00009 836 1102 MAP Kinase Kinase Kinase AT1G63700 28.839 4.89e-23 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Vivi431g00009 Pkinase 2.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi431g00009 - - tpra:123913087 1881.3