Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi428g00046 ATGGTGAACATGATGGAATGGCAGAAACAAGTTCAGAACGGGAATGTCGATGCCATGTATGTCAAAGTCATGACTGATGAACAACTGGAAACTCTCCGGAAACAAATTGCTGTTTATGCTACCATTTGTGAACAGCTTGTTGAGATGCATAAAACTCTCTCTGCTCAACAAGATCTTGCAGGGGTTAGGCTGGGAAATATATACTGTGATCCGTTGATGGCATCTGGTCACAAGATCACATCGAGACAGAGGTGGACACCTACACAGGATCAGCTCCAGATTCTCGAACGTATATTCGATCAGGGAAATGGAACTCCGAGCAAAGAAAAGATCAAGGAAATTGCTACTGAACTAAGCCAGCATGGTCAAATATCTGAAACAAATGTGTATAATTGGTTCCAAAATAGGCGTGCTAGATCGAAAAGAAAGATGCAAAACGGGGGAACTAGTAACACGGAATCAGAGGTAGAGACGGAGGTTGATTCCAAAGATAAGAAGACAAAACCAGAGGAATTTCAGTCTCATCAAAATGTTGCTGCAGGAGATGAAAATTTGTGCTTCCAGAACCCTGAAAAAGGCTCTGAATTGCAGTACTTGAATTCCGATTCTAACAAAACATATTCAATGTTTCAATCGGATGGTAACATAAGATCTTCAAGAAATTTGAACGGTGCCGGTGCATCTCTTTATGATGAAGTGCTATCAAACTCAAGGAATGATTATCTAGCTGGAAAAATGGAAGTGTCTGGGAGCTACAATTTATATCAGCAATCAGAAGACTATAATTTGGCAGGTTGA 798 0.406 MVNMMEWQKQVQNGNVDAMYVKVMTDEQLETLRKQIAVYATICEQLVEMHKTLSAQQDLAGVRLGNIYCDPLMASGHKITSRQRWTPTQDQLQILERIFDQGNGTPSKEKIKEIATELSQHGQISETNVYNWFQNRRARSKRKMQNGGTSNTESEVETEVDSKDKKTKPEEFQSHQNVAAGDENLCFQNPEKGSELQYLNSDSNKTYSMFQSDGNIRSSRNLNGAGASLYDEVLSNSRNDYLAGKMEVSGSYNLYQQSEDYNLAG 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi428g00046 265 SMART HOX_1 80 147 IPR001356 GO:0003677
Vivi428g00046 265 MobiDBLite consensus disorder prediction 140 170 - -
Vivi428g00046 265 MobiDBLite consensus disorder prediction 156 170 - -
Vivi428g00046 265 CDD homeodomain 82 144 IPR001356 GO:0003677
Vivi428g00046 265 Gene3D - 83 148 - -
Vivi428g00046 265 SUPERFAMILY Homeodomain-like 81 145 IPR009057 -
Vivi428g00046 265 ProSiteProfiles 'Homeobox' domain profile. 78 143 IPR001356 GO:0003677
Vivi428g00046 265 PANTHER WUSCHEL-RELATED HOMEOBOX 13 8 262 IPR044559 GO:0003700
Vivi428g00046 265 Pfam Homeodomain 82 142 IPR001356 GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi428g00046 4 265 Wox Gene Family AT4G35550 50.667 2.93e-87 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Vivi428g00046 Homeodomain 1.6e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi428g00046 - - gmx:100815539 372.474