Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi428g00027 ATGGAAGAGATGTTGAGTTCATCAACAACAATCAACTCCTCCAATATAGGGTTTCAGCTATTGAAGAAGCAAGGTTGGAAAGAAGGGACTGGCCTTGGGATCTCTGAACAGGGTAGATTAGAACCTGTGGAAACTCATGTGAAGAATAATAAGCGCGGTTTGGGAGCAGATAAAGTGAAGAAAAAGATAGTGAAACCTGATCATGGTGCTGATTCCTCTAAAGGAGACAATAAGCAGGAAGATTTGTCTAAAAAGAAAACCAAAGCACTTTCTAAACGGGTGAGAAAGATGCAGGAGTTAGAAAAGAAGATGCAGGAGAAGGAATTTGAGCGCGCTTTCTTTAGAGAGTTCTGGCCTGACAATGTATGA 369 0.4119 MEEMLSSSTTINSSNIGFQLLKKQGWKEGTGLGISEQGRLEPVETHVKNNKRGLGADKVKKKIVKPDHGADSSKGDNKQEDLSKKKTKALSKRVRKMQELEKKMQEKEFERAFFREFWPDNV 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi428g00027 122 ProSiteProfiles G-patch domain profile. 13 59 IPR000467 GO:0003676
Vivi428g00027 122 Pfam G-patch domain 14 56 IPR000467 GO:0003676
Vivi428g00027 122 MobiDBLite consensus disorder prediction 31 93 - -
Vivi428g00027 122 SMART G-patch_5 11 57 IPR000467 GO:0003676
Vivi428g00027 122 MobiDBLite consensus disorder prediction 41 93 - -
Vivi428g00027 122 Coils Coil 90 110 - -
Vivi428g00027 122 PANTHER BAT4 PROTEIN-RELATED 6 122 IPR039146 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi428g00027 3 118 C2H2 Transcription Factor Family AT5G26610 33.898 1.56e-10 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi428g00027 - - cam:101497292 201.06