Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi427g00017 ATGTCGAAGCGAGGTCGCGGAGGTTCCGCGGGTAACAAGTTCAGGATGTCACTCGGTCTGCCGGTGGCTGCGACGGTGAACTGCGCTGATAACACCGGAGCTAAGAATCTTTACATCATTTCCGTCAAAGGTATCAAGGGAAGATTGAACCGTTTGCCATCTGCTTGCGTTGGTGACATGGTTATGGCTACCGTGAAGAAGGGAAAGCCAGATCTCCGTAAGAAGGTGCTGCCGGCCGTTATCGTTCGTCAGCGCAAACCATGGCGCCGAAAGGACGGTGTTTTCATGTACTTCGAAGATAATGCTGGTGTGATTGTGAATCCTAAGGGTGAAATGAAAGGTTCTGCAATTACTGGTCCAATTGGGAAGGAGTGTGCTGATCTGTGGCCCAGGATTGCAAGTGCTGCTAATGCTATTGTTTAA 423 0.5012 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADLWPRIASAANAIV 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi427g00017 140 Hamap 50S ribosomal protein L14 [rplN]. 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vivi427g00017 140 SUPERFAMILY Ribosomal protein L14 11 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Vivi427g00017 140 Gene3D Ribosomal protein L14 1 140 IPR036853 GO:0003735|GO:0005840|GO:0006412
Vivi427g00017 140 FunFam 60S ribosomal protein L23 1 140 - -
Vivi427g00017 140 PANTHER 50S/60S RIBOSOMAL PROTEIN L14/L23 20 139 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vivi427g00017 140 SMART Ribosomal_L14_2 19 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vivi427g00017 140 Pfam Ribosomal protein L14p/L23e 22 140 IPR000218 GO:0003735|GO:0005840|GO:0006412
Vivi427g00017 140 ProSitePatterns Ribosomal protein L14 signature. 79 105 IPR019972 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi427g00017 1 140 Cytoplasmic Ribosomal Protein Gene Family AT1G04480 98.571 3.01e-99 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi427g00017 K02894 - jre:108981199 283.878