Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi425g00004 ATGTACTCAAATCCTCCTATGGATTATGCTTATCATACACCTTCATCTCATCAATGGAGCATTCCTCCAACCTATTCCACACCCACACCAACACCTTCATTTCCATCATTCCCATGGGAACTCTTCACACCTTACTACATTCATGAATCTTCATCACCAAAATTGTATCTAAATCATGGATATTCACCTCATACACCTACCTCATATCCACCACCACCTAACTCATATTCATCATCTCATTATTCATTCTACTACAATAATCATCATCAACCACTGCAACCAACAAAAACCTATCACACATTTAAAAAGGATTTTGATAAGCATTTGGAAGTGTCTCATCCCTCTTTTAAGAAAAATTCAAAAAAAAATTCAAAAACCATTCTCACAAAATCCAAATCATCCAACATCACACTCAAAACGATTTCAACCTTTTCATTTCTCAAACAGAAACCCAAACTTCTAGAATTCACACCCACACCAACACCTTCATCCCTTCTTCCAAATTCTGTTTTCGTTAACCCACTATACAACGAGAATTGGCGAAATCCTCTCCCAAAACCCCAATCCCCATCCTCAAACGCAGTGGTTTATCCCTACACGCACCGTCTCTCTCAAATTCACCTTCAACCTAAATCCAAACAAATCGGATCTCAAACAATCGCTTCTCATTTCAATAGAGAAGCTAAAAGGTTTCACAGTTTCGGAGCAACGAAGGAATCTCTAAGCAAAGTGTCGACGGAGGTATTCCAAATCGGCACTGATGTTCACCTATACGACAATCCCGAAGACGTCAACATCGTCCCTCTTCGCGACAGCAGGTTTGATTTCGAGACTACACATACTGAGAACTCTCTCCTTGTACTAGATGATGAAGAGAATTTTAAAAACAACAAAGCCACTTACCTCGCCGTAATCAACGATGCCGATGACGTCTCTGACGAAGCTTCGTCTATTGAATCCGCTCAAGACGATTTGTTAGGTGAAAACGACAAAGCAAAATTTTGTTTATATATGAGAAAAATTGAGAGAGTTGTTTCAAAAACATTTTCAGAACCCGATTGTTGCTTGGAGTCATCAGGAACTGATAAAAAGAACGACTCAGTCTCAGTCCCTTGCCGTCAAATTGGTGTTACTGGCCGGAGAAATTATTTTAGTCCACACTGGTCTGTTGAGGCTGTTGAGAAGGAATTGGATAGGGATGATGTTCTCGAAGCTGTCTTTCATGTGAATGCTCATAATAGACTTGAGATGCTTGAAATTAAGGATTTAATCATCACTGGAATTATATTGCCACTAGAAGGAAATGCTGACAAGAAAAAAGAGAAAGGTGTTAGATGTCAAGGTTTTGGTCGAATTGAATCATGGGATATATCTGGATATATGATAGCAAGAGAAAAATATGGAGTATTTGTTGCAGCTGATGAGAGTAACACTGTTAAAGATAGAAATGAATTGGTGGAAATTCACATACCAATTTACTTAAGCTCCATTAGCAAGGGTGTGGCAACTGTTATGGTATCTTACTCAAGTTGGAATGGAGTAGTTCTCGAACAGAAATATGAACTTGTCAAGAGGCTGCAAAACATGAAGCATATATGCGGAATGATAGGAGATGGCGTAAACGATGCTCCTGTGTTAAAGAAAGCTGATATCAGAATTGTTGCTAGAAGTGCTTCTGATATTGTCCTTATGGAGCATGGTTTTAGTGTCATTATCAATGTTGTCCTCACCAACAGGGCCATTTTCCAGAGAATGAAGAATTATACTATTTATGTTGTGTCAATCACCATTCGCTTCGTGTTCGGTTTCATGCTCAGTGCTTTGATTTGGAGATTTGATTTTGCACTTTTCATGGTTTTGATCATTGCAATACTGAAGGATGGTACCATTATGGCAATTTCAAAAGATCGAGTGAAAGCATCCCCACTGCCTGACAGTTGGAAACTAAAGGAAATATTGGCAAGTCGAATTTTGTTTCTAGTATCTGAGAGCATCTCATGGAAACATCATAGAGTTAATCTCCATAATTTTTTGATGTCATTTTCCCCTGATGCTTGTTTGCCTCTACTCATCCTATGCAGTAGCGGCTCATACGATGAAAGGGCTACCCGTTTAAGAGAAGGACTGCAATGGCTGGCAGGTGAATCACTTTCGCAACCCAACTTTCACATTAAGCTGCCTGCTCCTGCAGCTTCTGAGTGTAAGAATGTTTTGAAAAGTATAATACAAGGGCAGCACTTGCAAGGTAATGATAACATCCTACTTAAGTTGGCTGGAAAATATGATGGTTATGATGGCTATGATCTAGCAATACTAGTTGACAGAACTGTCCATGTTGTTGTTCTCCGTTTTCGGTCATCTAATTCCATTTATGAACACGAGGGTCCTGCTTTACAACTGGAGAATTTCTATCAGACAATGCATGATTTTCTTCCGGTTTCAATTGGTGACATCAAAATGCTTGAAGTTGAAGGAGCTTATTATGAAATCAATGTGGTCTTGCTCCTGTGTATAAACATTAAAAAAATTGTTCTGTTAGAAAAAGAATTCCAGTTGGTTACACAAACTAAAATGGAAGTCCACGATACTCAACAAGGAAGAGAATATCATTGCAGTTCTGTGACATAA 2628 0.3881 MYSNPPMDYAYHTPSSHQWSIPPTYSTPTPTPSFPSFPWELFTPYYIHESSSPKLYLNHGYSPHTPTSYPPPPNSYSSSHYSFYYNNHHQPLQPTKTYHTFKKDFDKHLEVSHPSFKKNSKKNSKTILTKSKSSNITLKTISTFSFLKQKPKLLEFTPTPTPSSLLPNSVFVNPLYNENWRNPLPKPQSPSSNAVVYPYTHRLSQIHLQPKSKQIGSQTIASHFNREAKRFHSFGATKESLSKVSTEVFQIGTDVHLYDNPEDVNIVPLRDSRFDFETTHTENSLLVLDDEENFKNNKATYLAVINDADDVSDEASSIESAQDDLLGENDKAKFCLYMRKIERVVSKTFSEPDCCLESSGTDKKNDSVSVPCRQIGVTGRRNYFSPHWSVEAVEKELDRDDVLEAVFHVNAHNRLEMLEIKDLIITGIILPLEGNADKKKEKGVRCQGFGRIESWDISGYMIAREKYGVFVAADESNTVKDRNELVEIHIPIYLSSISKGVATVMVSYSSWNGVVLEQKYELVKRLQNMKHICGMIGDGVNDAPVLKKADIRIVARSASDIVLMEHGFSVIINVVLTNRAIFQRMKNYTIYVVSITIRFVFGFMLSALIWRFDFALFMVLIIAILKDGTIMAISKDRVKASPLPDSWKLKEILASRILFLVSESISWKHHRVNLHNFLMSFSPDACLPLLILCSSGSYDERATRLREGLQWLAGESLSQPNFHIKLPAPAASECKNVLKSIIQGQHLQGNDNILLKLAGKYDGYDGYDLAILVDRTVHVVVLRFRSSNSIYEHEGPALQLENFYQTMHDFLPVSIGDIKMLEVEGAYYEINVVLLLCINIKKIVLLEKEFQLVTQTKMEVHDTQQGREYHCSSVT 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi425g00004 875 Gene3D - 567 665 - -
Vivi425g00004 875 PANTHER CALCIUM-TRANSPORTING ATPASE 507 658 - -
Vivi425g00004 875 SUPERFAMILY HAD-like 515 623 IPR036412 -
Vivi425g00004 875 NCBIfam HAD-IC family P-type ATPase 517 615 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi425g00004 875 Gene3D - 511 566 IPR023214 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi425g00004 513 659 Primary Pumps ATPases AT1G80660 73.377 9.68e-63 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi425g00004 K01535 - vvo:131631143 1670.21