Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Vivi424g00018 | ATGCTAGGGAAAAAGATGGTATCATTGAAGAAACTAGCCAAGAAGGTAAAGTCTAGTAGTAGTGGAGGTGAAACTAACAATGACCCTCCTCATCATGAGTGTTTGTTGAAGGGATATGAAGAAGAGTTATGTACAAGCACAACTCCAACTGGCTATTTTGCAGTTTATGTTGGTGATGAGCACCAAAGATATGTGGTTCCAACGAGTTATCTTTCTCACCCTTTATTCAAGATGCTGCTTGAGAAATCATATAATGAGTTTGGTTTTCAGCAGAGGAATGGCTTGGTTGTTCCATGTAGTGTTGATGCATTTCAAGAGGTTGTGAATGCTATTGAATGTAACAATGGCAAGTTTCACTTAGGCAAGATTTTTCATGATTTTGTTTGA | 387 | 0.3798 | MLGKKMVSLKKLAKKVKSSSSGGETNNDPPHHECLLKGYEEELCTSTTPTGYFAVYVGDEHQRYVVPTSYLSHPLFKMLLEKSYNEFGFQQRNGLVVPCSVDAFQEVVNAIECNNGKFHLGKIFHDFV | 128 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Vivi424g00018 | 128 | Pfam | Auxin responsive protein | 21 | 110 | IPR003676 | GO:0009733 | |
| Vivi424g00018 | 128 | PANTHER | AUXIN-INDUCED PROTEIN-LIKE-RELATED | 21 | 107 | IPR003676 | GO:0009733 |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Vivi424g00018 | 40 | 119 | Calmodulin-binding Proteins | AT5G20810 | 47.059 | 9.50e-22 | 84.0 |