Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi424g00018 ATGCTAGGGAAAAAGATGGTATCATTGAAGAAACTAGCCAAGAAGGTAAAGTCTAGTAGTAGTGGAGGTGAAACTAACAATGACCCTCCTCATCATGAGTGTTTGTTGAAGGGATATGAAGAAGAGTTATGTACAAGCACAACTCCAACTGGCTATTTTGCAGTTTATGTTGGTGATGAGCACCAAAGATATGTGGTTCCAACGAGTTATCTTTCTCACCCTTTATTCAAGATGCTGCTTGAGAAATCATATAATGAGTTTGGTTTTCAGCAGAGGAATGGCTTGGTTGTTCCATGTAGTGTTGATGCATTTCAAGAGGTTGTGAATGCTATTGAATGTAACAATGGCAAGTTTCACTTAGGCAAGATTTTTCATGATTTTGTTTGA 387 0.3798 MLGKKMVSLKKLAKKVKSSSSGGETNNDPPHHECLLKGYEEELCTSTTPTGYFAVYVGDEHQRYVVPTSYLSHPLFKMLLEKSYNEFGFQQRNGLVVPCSVDAFQEVVNAIECNNGKFHLGKIFHDFV 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi424g00018 128 Pfam Auxin responsive protein 21 110 IPR003676 GO:0009733
Vivi424g00018 128 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 21 107 IPR003676 GO:0009733
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi424g00018 40 119 Calmodulin-binding Proteins AT5G20810 47.059 9.50e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi424g00018 K14488 - gmx:100790208 183.341