Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi424g00013 ATGTATGATCCTCCCAATTTAACTCACATGCTCATTCCAATAGAGCAATTTTTAAACCGCAAGATTCCAATTTCCATTTCCTCATCGAGTAACATAATGCCAATTTCATATTCTTATTCATATTCACATTCACTCTCATCATCATTCATTCATCCAAAGCTAAACCCAAACCTCCGTCCAATCCAAACCCAATACCCAACCCAAAATAACCGCCAATTCCCGAACCTAAAACTCCAATCCTCCCTCCGAACCAACCACACAATCCACTTCCTAAAACCGCATCTAATCTCCCAGCACAAACCAATCCTCTACGGCTGGCTCTGCAGCGCTATCTCCGTCTACTCACTCTCCAACCTCCTCTCGAAATTCTCCGCCATCACCACCGCCACAACCGCCGTCGATGTCACACAGGGACTCGCGCTCGGCGGTTTGGTTCTTGTTCGGTTGATTGCCACGTATGCGCAGCACGCGCTTCTTTGGGAAGCTTCGCTTAATGCGGTTTACGATGTTCGCGTTCACGTTTTTGATCGTGTGCTTCAGAGGGAACTTGGTTTTTTTGAAGCTAACGACGCCGTTTCGAGTGGGGATGTTGCGTATAGGATTACTGCTGAAGCTTCCGATCTTGGCCTCACGTTATACGCTCTTCTTAATACCATAGTACCTAGTTCTCTGCAATTGTCTGCAATGATAATGCATATGTTGGCTATAAGTCCTGTCCTTTCTTTGATTTCAGCCATGGTTATTCCTTGTATGGTTCTAGTGGTTGCCTTTCTTGGTCAAGAACTTCGCAAGATATCTAAAAAGTCACATCTTAGCGTTGCTGCTCTCTCAGCATATCTAAATGAGATGCTGCCCGCGATTCTCTTTGTGAAAGCAAACAATGCAGAGTTGCTTGAGAGTGCCAGGTTTAGGAGACTGGCCCTGGCGGACAGTTCTGCAAAGCTGAACAAAAAAAGGATGAAAGCAGTCATTCCCCAGGTTATACAGGCTATTTACTTTGGAGTTCTTTCCATACTTTGCGCAGGTTCGGTGGTTATTTCAAAAGGTTCATTTGATCGCCGTAGCTTGGTTTCATTCGTGACTTCATTGCTTTTCTTGATCGAGCCTATTCAGGATGTAGGAAAAGCTTACAATGAATGGAGGCAGGGAGAACCAGCTATTGAACGCCTGTTTGCTATGACCAAGTTCAAAAATAAGGTAGTTGAGAAACCAGATGCTGTTGATTTGGACCATGTTACAGGGGACCTGAAATTTTGTGATGTATCCTTTAAGTATAATGATGGCTTGCCCGTAATCTTAAATGGATTGAATCTTCACGTTCGGACAGGAGAAATAGTTGCTATCGTAGGTCCGTCGGGGGGAGGGAAAACAACACTCGCGAAACTGTTGCTTCGGCTTTATGATCCTATATCTGGTTCTATACTGATTGATAACCAAAACATCCAAGACATTCGTTTGCGGAGTTTAAGAAAACACGTCGGTGTAGTTTCTCAAGATATAACACTTTTTTCAGGTACAGTTGCTGAAAACATTGGTTATAGGGACCTGACAACAAAAATCGACATGGAGAGAGTAAAACGGGTAGCTCAAACTGCTTATGCAGATGAGTTTATTAGAAAACTTCCAGAAGGTTACAAAACCAATATTGGACCAAGGGGCTCAACTTTAAGTGGAGGCCAGAGGCAAAGGCTGGCTATTGCAAGGGCTTTCTATCAAAACTCTTCTATTTTAATTCTCGACGAGGCAACTTCTGCCTTAGATAGTAAATCTGAGTTATTAGTGAGGCAAGCTGTGGAGCGTTTAATGGAGAATCGCACGGTGCTTGTGATTTCGCATCGCTTGGAAACAGTTATGATGGCGAAACGAATATTCCTTTTGGATAATGAAAAGCTAGAAGAGCTGCCTAGATCAACAATGTTGAACGGTCATATGGATTCATTGCTATCATCTGGGCGTATTATTTGA 1965 0.4336 MYDPPNLTHMLIPIEQFLNRKIPISISSSSNIMPISYSYSYSHSLSSSFIHPKLNPNLRPIQTQYPTQNNRQFPNLKLQSSLRTNHTIHFLKPHLISQHKPILYGWLCSAISVYSLSNLLSKFSAITTATTAVDVTQGLALGGLVLVRLIATYAQHALLWEASLNAVYDVRVHVFDRVLQRELGFFEANDAVSSGDVAYRITAEASDLGLTLYALLNTIVPSSLQLSAMIMHMLAISPVLSLISAMVIPCMVLVVAFLGQELRKISKKSHLSVAALSAYLNEMLPAILFVKANNAELLESARFRRLALADSSAKLNKKRMKAVIPQVIQAIYFGVLSILCAGSVVISKGSFDRRSLVSFVTSLLFLIEPIQDVGKAYNEWRQGEPAIERLFAMTKFKNKVVEKPDAVDLDHVTGDLKFCDVSFKYNDGLPVILNGLNLHVRTGEIVAIVGPSGGGKTTLAKLLLRLYDPISGSILIDNQNIQDIRLRSLRKHVGVVSQDITLFSGTVAENIGYRDLTTKIDMERVKRVAQTAYADEFIRKLPEGYKTNIGPRGSTLSGGQRQRLAIARAFYQNSSILILDEATSALDSKSELLVRQAVERLMENRTVLVISHRLETVMMAKRIFLLDNEKLEELPRSTMLNGHMDSLLSSGRII 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi424g00013 654 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 124 633 IPR039421 -
Vivi424g00013 654 Gene3D - 405 651 IPR027417 -
Vivi424g00013 654 Gene3D ABC transporter type 1, transmembrane domain 97 395 IPR036640 GO:0005524|GO:0016020
Vivi424g00013 654 Pfam ABC transporter transmembrane region 115 369 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi424g00013 654 ProSitePatterns ABC transporters family signature. 556 570 IPR017871 GO:0005524|GO:0016887
Vivi424g00013 654 SMART AAA_5 442 630 IPR003593 GO:0016887
Vivi424g00013 654 Pfam ABC transporter 433 584 IPR003439 GO:0005524
Vivi424g00013 654 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 107 382 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi424g00013 654 FunFam ABC transporter related 89 396 - -
Vivi424g00013 654 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 416 653 IPR003439 GO:0005524
Vivi424g00013 654 SUPERFAMILY ABC transporter transmembrane region 105 394 IPR036640 GO:0005524|GO:0016020
Vivi424g00013 654 CDD ABC_6TM_exporters 138 390 - -
Vivi424g00013 654 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 405 633 IPR027417 -
Vivi424g00013 654 FunFam ABC transporter ATP-binding protein 409 650 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi424g00013 406 652 Calmodulin-binding Proteins AT2G36910 44.800 1.23e-54 200