Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Vivi421g00005 | ATGTACCCTCAACCACACTACCAATCTCAACCCTTCAATTCACAAGAACAACAACAACAACCCTACTATTCAGATTCTTCGCTTCATCCTCCCGGAACTAACCCAATTGCAAATTCAACACCTTTTTCTGCTTACGCCTCCCAAACAGCAGATTATCAGAATTGGGTCGCTCAACCATCTGAACCCATCGGTTACGATCTCGGGGGCAATGCTGGTGGTTCAGCATACGAGACTTCTGCGTGGAATGCTACTTGGCCACACCAAATTTATGGTAATGAGACTACATCAATGTTGCCTAACCGATCCAAATTCACCCAAGCGTTGAGGTGTGAAGTGTGTAAAATTGATGTCAATAGCAAAGATTCATATGAAAAACACGTAGCTGGAAAGAAACACCAGAAGAATTTACAAAGTGGCGCAAGCATCCAAGGACAGGCGTTAATCGGTCCTGTAGTCCAGCAATCAGCGATTAAGAAACAGGTGGAACAGTCAAAGATTTGCACAACTTGCAATGTTTTGTGCACATGTCACGACACATATATCAAACATATTGCTGGGAAAAAGCACACAGCTCAGGTTTGCTTGATGTCTAATGGTGGCATTGGTCCATCTATTGCCGAATTCAAGCGTATTGGAGTTCCTCCGTTTCAAAAAGCTGCTAAGAGACTCAAGGTTGCTCAATCTGCATGGTGTGAAACTTGTAAGATTAATTGTAACAGCAGGGATATGTACATTACACATTTAGCCGGAAAAAAACACTTGAAGAACTTGGAAAAACTGTCGAATCCGAAAATCGAAGTTGGCACAAGCGCCACTGCCACTGCGACAATTACTATAATCGGACCACAGGAAAAGCCAGGTACTGATAATCCAAAAGCAAGGAAGGCATCGGAACTTGCTATCGAGTCAAAGAAACGTAAAATTGTAGAAGGAGGAACTGCGGTTAATAATGTTAAAACGTGTACTTTATGCAATGTGGTGTGTAATAGCGAGATAGTTTTCAATTTGCACCTTATTGGCCAGAAACATGCTGCTATGGTGAAGAAAGCAGGATCAAGCACTGGTTGA | 1068 | 0.4251 | MYPQPHYQSQPFNSQEQQQQPYYSDSSLHPPGTNPIANSTPFSAYASQTADYQNWVAQPSEPIGYDLGGNAGGSAYETSAWNATWPHQIYGNETTSMLPNRSKFTQALRCEVCKIDVNSKDSYEKHVAGKKHQKNLQSGASIQGQALIGPVVQQSAIKKQVEQSKICTTCNVLCTCHDTYIKHIAGKKHTAQVCLMSNGGIGPSIAEFKRIGVPPFQKAAKRLKVAQSAWCETCKINCNSRDMYITHLAGKKHLKNLEKLSNPKIEVGTSATATATITIIGPQEKPGTDNPKARKASELAIESKKRKIVEGGTAVNNVKTCTLCNVVCNSEIVFNLHLIGQKHAAMVKKAGSSTG | 355 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Vivi421g00005 | 355 | PANTHER | ZINC FINGER RNA-BINDING PROTEIN | 156 | 269 | - | - | |
Vivi421g00005 | 355 | SUPERFAMILY | beta-beta-alpha zinc fingers | 87 | 137 | IPR036236 | - | |
Vivi421g00005 | 355 | SMART | ZnF_U1_5 | 316 | 350 | IPR003604 | GO:0003676|GO:0008270 | |
Vivi421g00005 | 355 | SMART | ZnF_U1_5 | 162 | 196 | IPR003604 | GO:0003676|GO:0008270 | |
Vivi421g00005 | 355 | SMART | ZnF_U1_5 | 105 | 139 | IPR003604 | GO:0003676|GO:0008270 | |
Vivi421g00005 | 355 | SMART | ZnF_U1_5 | 226 | 260 | IPR003604 | GO:0003676|GO:0008270 | |
Vivi421g00005 | 355 | SUPERFAMILY | beta-beta-alpha zinc fingers | 314 | 349 | IPR036236 | - | |
Vivi421g00005 | 355 | SUPERFAMILY | beta-beta-alpha zinc fingers | 226 | 260 | IPR036236 | - | |
Vivi421g00005 | 355 | Pfam | Zinc-finger of C2H2 type | 109 | 132 | - | - | |
Vivi421g00005 | 355 | Pfam | Zinc-finger of C2H2 type | 166 | 189 | - | - | |
Vivi421g00005 | 355 | Pfam | Zinc-finger of C2H2 type | 230 | 253 | - | - | |
Vivi421g00005 | 355 | Pfam | Zinc-finger of C2H2 type | 320 | 343 | - | - | |
Vivi421g00005 | 355 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Vivi421g00005 | 355 | Gene3D | Classic Zinc Finger | 300 | 350 | - | - | |
Vivi421g00005 | 355 | Gene3D | Classic Zinc Finger | 216 | 260 | - | - | |
Vivi421g00005 | 355 | Gene3D | Classic Zinc Finger | 92 | 138 | - | - | |
Vivi421g00005 | 355 | Gene3D | Classic Zinc Finger | 152 | 195 | - | - | |
Vivi421g00005 | 355 | SUPERFAMILY | beta-beta-alpha zinc fingers | 158 | 193 | IPR036236 | - | |
Vivi421g00005 | 355 | SMART | c2h2final6 | 319 | 343 | IPR013087 | - | |
Vivi421g00005 | 355 | SMART | c2h2final6 | 165 | 189 | IPR013087 | - | |
Vivi421g00005 | 355 | SMART | c2h2final6 | 108 | 132 | IPR013087 | - | |
Vivi421g00005 | 355 | SMART | c2h2final6 | 229 | 253 | IPR013087 | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Vivi421g00005 | 162 | 350 | C2H2 Transcription Factor Family | AT5G61190 | 28.042 | 3.60e-17 | 81.3 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Vivi421g00005 | - | - | vvo:131595247 | 551.977 |