Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi41g00044 ATGGCTCACATCTGCCAATGTCTGAGTCGACTGTTAACCTTCCGGCGAGACTCCCCGGTAACCATCTCCGGCAACCACCGCAAAACCGGTCAACAGTTTGTGGAGGAAGTTGTGTCACTAGCACACGGCCTTCTCCAGCTTGGAGTCTCACCCGGTGACGTTGTCGCCATCTCTGCTTACAACAGTGATTGGTATTTGGAATGGTTATTAGCCATTGCGTTTGTTGGAGGAATTGTTGCTCCTTTGAACTATCGCTGGAGTTTTGAAGAGGCGAGGTTTGCAATGGCTGTAGTGAAGCCAGTGATGTTAGTGATTGATGAGAGTTGCTATTCATGGTACTTCAAATTCCAACAATTTGATATTCAATCTTTGAAGTGGCATGTTTTGTTGGATTCTCCTTCTTCAGATTTTGCAAAGAAATGGAATGTGTTGACTCCAGGAATGCTTAAGAAGCAACTTGTGAAACCTATAGAGTTTAATTACTCCTGGGCACCTGAAGGAGCTGTCATAATATGCTTTACTTCAGGAACTACTGGAAAACCCAAAGGAGTGACAATAAGCCATGAAGCTTTGATCATACAGTCCCTAGCAAAGATTGCAATAGTTGGATATAGTGAAGATGATGTTTATCTTCATACTGCTCCATTATGTCACATTGGTGGCTTGTCATCGGCAATGACCATGCTCATGGTTGGAGGTTGCCATATATTCATGCCAAAGTTTGATGCAGAATTAACTGTTGATGCCATAGAACAACATGCTGTCACATCTTTTATCACGGTTCCTGCCATGATGGCCAGTTTGATTTTTATTGTTAGGCACAAACAAACATGGAAAGGGGGAGAATCTGTCAAGAAAATACTCAATGGGGGTGGAAGCCTCTCACTTGAGCTTATCAAAGAAAGTAACATATTCTTCCAGAAAGCTAAGCTTATTTCAGCTTATGGGATGACAGAGGCATGCTCTTCAATGACATTCTTAACACTGTATGATCCTTTTCAAAAATATGGTGTGGTAGAATCCAAACATCTCGTTCACCAGCCACAAGGTGTTTGTGTTGGCAAGGCTGCACCTCATGTAGAGCTGAAGATATGTACAGATTCTTCTGGTGACACTGGAAGAATTTTAACTAGAGGACCACATTTAATGATCAAGTATTGGGATCAAACTCTCACAAACTCATCTAATCGGAGGAATGAAGTATGGCTTGACACAGGTGACATTGGATCAATGGACTGTCATGGTAATTTGTGGCTCCTTGGACGTACAAATGGTCGCATCAAGAGTGGCGGGGAGAATATTTACCCCGAAGAGGTTGAGGCAATTCTACTAGGACATCCAGGCATTGCAAGTGTTGTTATTGTGGGAATTCCAGATGCTCGTTTCACAGAGTTGGTGACAGCATGTATCAAACCTAGTGAAAATTGGCAATGGTTAGAGCATTCTACTTCAAATGAAGAGTATCACTTATCTAAAAAGAATCTCCATCAATACTGTTTGGAAAATAGTTTAAGCAGGTTTAAGATACCAAAGATATTTATTGTATGGAAGAAGCCTTTTCCAGTCACTACCACAGGAAAAATAAGAAGAGACCAAGTTAGAAAGGAGGTTTTGTCTGAGCTACAATCTTTGCATAGTAATCTTTGA 1647 0.4147 MAHICQCLSRLLTFRRDSPVTISGNHRKTGQQFVEEVVSLAHGLLQLGVSPGDVVAISAYNSDWYLEWLLAIAFVGGIVAPLNYRWSFEEARFAMAVVKPVMLVIDESCYSWYFKFQQFDIQSLKWHVLLDSPSSDFAKKWNVLTPGMLKKQLVKPIEFNYSWAPEGAVIICFTSGTTGKPKGVTISHEALIIQSLAKIAIVGYSEDDVYLHTAPLCHIGGLSSAMTMLMVGGCHIFMPKFDAELTVDAIEQHAVTSFITVPAMMASLIFIVRHKQTWKGGESVKKILNGGGSLSLELIKESNIFFQKAKLISAYGMTEACSSMTFLTLYDPFQKYGVVESKHLVHQPQGVCVGKAAPHVELKICTDSSGDTGRILTRGPHLMIKYWDQTLTNSSNRRNEVWLDTGDIGSMDCHGNLWLLGRTNGRIKSGGENIYPEEVEAILLGHPGIASVVIVGIPDARFTELVTACIKPSENWQWLEHSTSNEEYHLSKKNLHQYCLENSLSRFKIPKIFIVWKKPFPVTTTGKIRRDQVRKEVLSELQSLHSNL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi41g00044 548 Pfam AMP-binding enzyme 17 429 IPR000873 -
Vivi41g00044 548 PANTHER ACYL-COA SYNTHETASE 28 539 - -
Vivi41g00044 548 Pfam AMP-binding enzyme C-terminal domain 438 527 IPR025110 -
Vivi41g00044 548 CDD AFD_class_I 171 529 - -
Vivi41g00044 548 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
Vivi41g00044 548 Gene3D - 2 424 IPR042099 -
Vivi41g00044 548 Gene3D - 425 540 IPR045851 -
Vivi41g00044 548 SUPERFAMILY Acetyl-CoA synthetase-like 4 542 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi41g00044 40 456 Monolignol Biosynthesis Gene Families AT3G21240 30.394 9.67e-41 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi41g00044 K14760 - gmx:100809925 869.381