Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi41g00041 ATGATGAGGAAGGTGTTTGGGGAGGGAGTATTGATTGTGCTGATTTTGATGATAGTGAGTGAAAATGTTGAGGCTCAACCAAAGTCAATTCTTATCAATTGTGGTTCAAATTCTTCTGTGAATGTTGATGGTAGGAGATGGATTGGGGATATGGCTTCTAATAACAATGTTACCCTTAATTCTCCTGGTGTTGTTGCTTCCACTGATGCATTGAGTGGGAATTCAATCTATGAGCCGATTTATCGAACGGCGAGAGTTTTTACGGCTTCTATGAATTACACAATCAGAGGAGTTCAGGGAAAGTATTTTGTTAGGTTCCATTTATGTCCCTTTGAGATTGTGGACCACAATGTGAATGAGTCCTCTTTTGGTGTTGTTGTCAATGGTATGAAGCTTTTGTCGGAGTTTAATGTTGCGGGTAAGATATCCGAAAAGAATGTTAACTTGCAGAATTCGGGAAGGAATTCTAGTTTGTTCTTTTTGGTTAAGGAGTATATTCTTGATGTCGATGATGGTTTGCTTCTGATTGAGTTTGTTCCGAGTAAAGACTCGTTTGGCTTCATCAATGCCATTGAGATTGTTCCGGTTGTTGGTGAGTTGTTCGATGGTTCGGTCGGTAAAGTTGGTGGTGGAAACTTGAATTTGGCTGGACATGGGATGGAGACTATGTATAGGTTAAATGTTGGTGGTCCTGAGATTCGATCCAACGAGGATCCCGATCTTCGGAGAATTTGGGAAGTTGATTCTAGCTATATGATCACGGAAAATGCCGGAGTAGGAATGAAGAACAGCTCTAATATTACATATGCTTCTGTGAATGATACTTCAGTAGCTCCTCTCCTTGTGTATGAAACTGCAAGGGCAATGTCCAACACTGAAGTCTTGGACAAAAGGTTTAACATGTCGTGGAAGTTTGAAGTAGATCCTGATTTCGATTACGTTGTCCGGTTACATTTCTGCGAGCTGATGTATGATAAGTCAAACGAGAGAGTGTTCAGGATCTACATAAACAACAGGACAGCTGCAGATAATCTTGATGTTTTTGTTCGAGCAGGAGGGAAGAATAAAGCGTATCACCTAGATCATTATGATTCCGCGTCGATGAGGATGGGCACACTTTGGGTTCAACTAGGTCCTGATACCGCTGCTGGTGCTGCGGGAACTGATGCTCTCTTGAATGGTCTCGAGATTTTTAAGCTTAGTCGGAACGGGAATCTTGCCTATGCTGAGAAATACAACTCGGCTGGGAATTCGGGAAGCAAATCAAAATCAAAAGTTCTTTGGATTGGAGTCGGAGCAGGTATAGCTTCCGTGGCTATAATTGCATGTATGGGTGTCTTTGTTTTCTGTTTCTGCAAAAGAAGGAGAAAGGAATCAAGTGATGCCAAAAACAACTCTCCCGGTTGGCTACCGATATTCCTTTACGGAGGGGCTACTGTAAACAGCACTGTAGGTGTCAAGGGATCAAATGGAAATCAGAAGTTATATGGATCTGTGGCCTCAACTGGAGCTGGGAAACGGTTTACTTTGGCTGAAATCAACGCTGCAACGAAGAGTTTCGATGAGAATTTGGTAATTGGAGTTGGAGGCTTTGGTAAGGTATATAAGGGAGAAGTTGATGATGGTGTGCCCGCTGCAATTAAGCGCGCCAATCCGCAGTCTGAGCAAGGTCTGGCTGAATTCGAGACCGAAATAGAGATGCTCTCGAAACTAAGACACAGGCATCTAGTGTCTTTGATTGGTTTCTGCGAAGAGAAAAGTGAAATGATTTTGGTTTATGAGTACATGGCAAACGGAACTCTAAGAAGTCATCTATTTGGAAGTAATCTCCCTCCACTAACATGGAAGCAGCGTCTCGAAGCTTGTATAGGTGCTGCAAGGGGACTTCACTACCTTCACACAGGAGCCGACCGAGGAATAATTCACCGAGATGTCAAAACAACCAATATACTGTTAGACGAGAATTTCGTAGCCAAAATGGCTGATTTCGGTCTGTCAAAAGACGGTCCTGCTTTCGAACACACTCATGTTAGCACTGCTGTGAAAGGAAGTTTCGGCTATCTCGATCCAGAGTATTTCAGAAGACAACAGTTAACCGAGAAATCAGATATTTACTCTTTCGGAGTTGTTCTGTTTGAAGCTGTTTGTGCTAGAGCCGTGATAAACCCTACATTGCCTAAAGACCAAATCAATCTCGCAGAATGGGCGTTGAGATGGCAAAGAGAAAGATCGCTCGAAAAAATCATCGATCCACATCTTAAAGGAAACTATTGCCCCGAATCATTGTCTAAGTTTGGGGAGATAGCTGAAAAATGTCTCGCGGATGACGGTAAAAGTCGGCCTACCATGGGAGAGGTGTTATGGCACTTGGAATATGTGTTACAGCTACATGAAGCTTGGCTCAACATGGACAACAACAATAGCACAGAAAATTCCTTGTCTAGAGTTGAAGTTGGACAAGAGCATTCAAATCAAGATGAAGAAGCATGA 2490 0.4273 MMRKVFGEGVLIVLILMIVSENVEAQPKSILINCGSNSSVNVDGRRWIGDMASNNNVTLNSPGVVASTDALSGNSIYEPIYRTARVFTASMNYTIRGVQGKYFVRFHLCPFEIVDHNVNESSFGVVVNGMKLLSEFNVAGKISEKNVNLQNSGRNSSLFFLVKEYILDVDDGLLLIEFVPSKDSFGFINAIEIVPVVGELFDGSVGKVGGGNLNLAGHGMETMYRLNVGGPEIRSNEDPDLRRIWEVDSSYMITENAGVGMKNSSNITYASVNDTSVAPLLVYETARAMSNTEVLDKRFNMSWKFEVDPDFDYVVRLHFCELMYDKSNERVFRIYINNRTAADNLDVFVRAGGKNKAYHLDHYDSASMRMGTLWVQLGPDTAAGAAGTDALLNGLEIFKLSRNGNLAYAEKYNSAGNSGSKSKSKVLWIGVGAGIASVAIIACMGVFVFCFCKRRRKESSDAKNNSPGWLPIFLYGGATVNSTVGVKGSNGNQKLYGSVASTGAGKRFTLAEINAATKSFDENLVIGVGGFGKVYKGEVDDGVPAAIKRANPQSEQGLAEFETEIEMLSKLRHRHLVSLIGFCEEKSEMILVYEYMANGTLRSHLFGSNLPPLTWKQRLEACIGAARGLHYLHTGADRGIIHRDVKTTNILLDENFVAKMADFGLSKDGPAFEHTHVSTAVKGSFGYLDPEYFRRQQLTEKSDIYSFGVVLFEAVCARAVINPTLPKDQINLAEWALRWQRERSLEKIIDPHLKGNYCPESLSKFGEIAEKCLADDGKSRPTMGEVLWHLEYVLQLHEAWLNMDNNNSTENSLSRVEVGQEHSNQDEEA 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi41g00041 829 FunFam Receptor-like protein kinase FERONIA 219 402 - -
Vivi41g00041 829 SUPERFAMILY Protein kinase-like (PK-like) 496 792 IPR011009 -
Vivi41g00041 829 ProSiteProfiles Protein kinase domain profile. 520 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi41g00041 829 PANTHER OS07G0166700 PROTEIN 506 797 IPR045272 GO:0004714|GO:0006468
Vivi41g00041 829 Gene3D Phosphorylase Kinase; domain 1 483 595 - -
Vivi41g00041 829 Gene3D Transferase(Phosphotransferase) domain 1 596 817 - -
Vivi41g00041 829 MobiDBLite consensus disorder prediction 810 829 - -
Vivi41g00041 829 SMART serkin_6 520 793 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi41g00041 829 Pfam Malectin-like domain 32 399 IPR024788 -
Vivi41g00041 829 Gene3D - 29 196 - -
Vivi41g00041 829 Gene3D - 219 402 - -
Vivi41g00041 829 FunFam Receptor-like protein kinase FERONIA 596 811 - -
Vivi41g00041 829 ProSitePatterns Protein kinases ATP-binding region signature. 526 548 IPR017441 GO:0005524
Vivi41g00041 829 CDD STKc_IRAK 526 791 - -
Vivi41g00041 829 Pfam Protein tyrosine and serine/threonine kinase 525 787 IPR001245 GO:0004672|GO:0006468
Vivi41g00041 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 640 652 IPR008271 GO:0004672|GO:0006468
Vivi41g00041 829 FunFam receptor-like protein kinase FERONIA 485 595 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi41g00041 2 826 Receptor kinase-like Gene Family AT1G30570 64.115 0.0 1101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Vivi41g00041 Malectin_like 8.1e-33 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi41g00041 - - gmx:100791403 1326.61