Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi41g00038 ATGAAGCTCTTTACCCTTTTTGTGTTATCTTTATCTTTCTTTACCATTATGGGGCAGCTTCCTTCTCAGGACATTTTAGCATTGTTGGAATTTAAGAAATGCATCAAGCATGACCCTGCTGGTTATGTCCTGAATTCGTGGAACGAAGAATCGATTGACTTTGACGGTTGTCCGTCTTCGTGGAATGGTGTTCTTTGTAATGGTGGTAATGTTGCTGGCGTTGTCCTTGATAACTTAGGTCTCTCGGCCGATACTGACTTGAGTGTTTTTTCGAATCTCTCGAAGCTTGTGAAACTTTCCATGGCCAACAATTCCATATCAGGAAAATTACCTAACAATGTTGCCGATTTCAAAAGCCTTGAATTTCTTGATATTTCCAATAACCTCTTTTCCTCGTCCTTACCGGTTGGAATCGGTGGATTTGATAGCTTGCAGAATCTGTCATTGGCTGGAAATAACTTTTCCGGTCAAATTCCGAATTCTATTTCCGAGATGTCTTCCATCAAATCCTTAGACTTGAGCCGCAACGTCCTTTCCGGAGCGCTTCCGCAATCATTGACTAAGCTGGATAGTCTTGTGTCTCTTAATTTGTCTCATAATGGCTTCACCGGAAAAATTCCCAGAGGTTTCGAGCTTATTTCCACCCTTGATAAACTTGATTTGCACGCGAATATGCTTGACGGTCCTTTAGATCTTGAGTTTATGCTTTTATCAGGTGCTAGCTATGTTGATTTAAGTGATAACATGCTGCTGAGTTCCGATTCCAGGAAATTTCTTCCGCAAATATCTGAAAGTATCAAGTATATGAATCTAAGCCATAACCAGCTTACTGGTTCATTGGTTGGTGGAGCTGAACAACCTGTTTTCCAAAACTTGAAGGTGTTGGATCTCAGTTATAACCAATTGAATGGTGAATTACCTGGATTCGATTTCGTTTACGATCTCCAAATCCTTAAGCTTAGCAACAATAAATTTTCAGGATTTATTCCTAGTGGCTTACTTAAAGGAGATTCTTTGGTTTTAACTGAACTTGATTTGAGCGCCAACAATCTCTCAGGGCCACTGAGTATAATAACATCAACGACACTTCACTTTCTGAATATCTCGTCGAATGGCTTCACTGGCCAGCTGCCACCGCTGACTGGAAGTTGCGCTGTACTTGATCTGTCAAATAACAAATTTGAAGGAAATTTAACGAGGATGTTTAAATGGGGGAACATAGAATATCTCGATCTCAGTCGGAATCGTTTGACAGGGAACATCCCTGAGGAAACTCCTCAGTTTTTGCGATTGAATTATTTGAACTTATCTGGTAATGATCTCGGTGACTCCCTTCCAAAAGTGTTAACACGGTATCCAAAGCTTAGAGTGCTTGATATCAGTTCCAACCAATTAAAAGGCTTTCTTCTAGCAGATTTTTTCACAATGCCGACATTACAAGAGCTTCATCTCGAAAATAATTTGATCGATGGTGGCATCAATTTATCATCTACTCTTGACCAATCACATCTTCAGGTGCTTGATCTTTCTCACAACCAGCTTAATAGCTTTTTTCCCGATAAATTTGGATCGTTAACTAGCCTGAGAGTGCTCAATATCGCTGGAAATAAATTTGCTGGTTCTCTTCCAACTACGATTTCTGACATGAGTTCTCTAGACTCCTTGGATATATCAGATAATCGTTTTACCGGTCCACTTCCAAATAACATGCCAATTGGACTCAAAGACTTCAATGCTTCGGAAAATGATCTATCTGGAGTTGTCCCCGAAATTCTTAGGAAGTTCCCTACTTCTTCTTTCTTTCCTGGAAATGATAAGTTACATTTTCCAAATGGTCCTCCTGGATCAACCGTTTCACCGGCCGATAGTTCCGTGGGGAAGAAGTCTATGACCACGGTTGTTAAAGTAATAATTATAGTGTCATGTGTGGTTGCTCTCTTCATATTAATCTTACTGGCTGTCTTCATACACTACATACGTATGTCAAGATCATCTACTCACGAATATGATACAAGTAAGGATATCCGCGGGCGCTCTCAACCGGTAATCTCTGGACCTATTCGTCCGACAGAGAGAGGCGGCCCTTTGGTTGTATCCGCTGAAGATCTTGTATCCTCGCGTAAAGGATCACCATCAGAAATAATTAGCCCTGATGAAAAAACTGCAGCTGTAGCTGGATTCTCCCCGTCAAAACACAGCCACTTTTCATGGTCACCAGGATCTGGCGATTCATTGACTGCCGAAAATCTTACAAGACTAGATACAAGGTCTCCGGATAGGTTGATTGGTGAGCTGCATTTTCTTGATGATACAATATCGCTGACACCTGAGGAGCTATCAAGGGCCCCGGCTGAAGTTTTGGGAAGAAGTAGTCACGGTACTTCGTACAAGGCAACTTTGGATAATGGCGTGTTGTTGAGAGTGAAGTGGTTGAGAGAAGGAGTGGCGAAACAAAGGAAAGAATTCGTTAAAGAGATAAGAAAGTTTGCAAACATCAGACATCCAAATGTCGTCGGTTTGAGAGGTTATTATTGGGGTCCTACGCAGCACGAGAAGCTCATTCTTTCAGATTACATTTCACCAGGAAGTCTTTCAAGTTTTCTTTATGATCGACCAGGAAGAAACGGTCCACCGTTAACATGGGCTCAGAGGCTCAAAATAGCAGTTGACGTAGCACGTGGCCTGAACTATCTCCATTTCGACCGAGCTGTTCCTCATGGGAACCTTAAAGCTACAAACGTGCTGTTAGACACACCTGATATGAACGCACGTGTAGCTGACTATTGTCTTCACCGACTCATGACTCAAGCCGGTACCATCGAACAGATTCTTGATGCTGGTGTCTTAGGTTATCGTGCACCAGAGTTAGCCGCTTCCAAGAAGCCAATGCCGTCCTTCAAGTCAGATGTCTATGCTTTCGGCGTGATACTTTTGGAGCTTTTAACTGGAAGGTGTGCTGGCGATGTGGTATCCGGTGATGAAGGAGGTGTTGATCTTACAGATTGGCTAAGATTGCGAGTAGCAGAAGGTCGAGGCTCGGAGTGTTTTGACTCTACTTTGATGTCAGAGATGGGAAATCCAGTTGTAGAAAAGGGAATGAAAGAGGTCTTAGGAATAGCGATCCGATGTATTCGATCGGTTTCCGAAAGGCCTGGTATCAAGACTATATATGAAGATCTTTCTTCTATATAG 3192 0.422 MKLFTLFVLSLSFFTIMGQLPSQDILALLEFKKCIKHDPAGYVLNSWNEESIDFDGCPSSWNGVLCNGGNVAGVVLDNLGLSADTDLSVFSNLSKLVKLSMANNSISGKLPNNVADFKSLEFLDISNNLFSSSLPVGIGGFDSLQNLSLAGNNFSGQIPNSISEMSSIKSLDLSRNVLSGALPQSLTKLDSLVSLNLSHNGFTGKIPRGFELISTLDKLDLHANMLDGPLDLEFMLLSGASYVDLSDNMLLSSDSRKFLPQISESIKYMNLSHNQLTGSLVGGAEQPVFQNLKVLDLSYNQLNGELPGFDFVYDLQILKLSNNKFSGFIPSGLLKGDSLVLTELDLSANNLSGPLSIITSTTLHFLNISSNGFTGQLPPLTGSCAVLDLSNNKFEGNLTRMFKWGNIEYLDLSRNRLTGNIPEETPQFLRLNYLNLSGNDLGDSLPKVLTRYPKLRVLDISSNQLKGFLLADFFTMPTLQELHLENNLIDGGINLSSTLDQSHLQVLDLSHNQLNSFFPDKFGSLTSLRVLNIAGNKFAGSLPTTISDMSSLDSLDISDNRFTGPLPNNMPIGLKDFNASENDLSGVVPEILRKFPTSSFFPGNDKLHFPNGPPGSTVSPADSSVGKKSMTTVVKVIIIVSCVVALFILILLAVFIHYIRMSRSSTHEYDTSKDIRGRSQPVISGPIRPTERGGPLVVSAEDLVSSRKGSPSEIISPDEKTAAVAGFSPSKHSHFSWSPGSGDSLTAENLTRLDTRSPDRLIGELHFLDDTISLTPEELSRAPAEVLGRSSHGTSYKATLDNGVLLRVKWLREGVAKQRKEFVKEIRKFANIRHPNVVGLRGYYWGPTQHEKLILSDYISPGSLSSFLYDRPGRNGPPLTWAQRLKIAVDVARGLNYLHFDRAVPHGNLKATNVLLDTPDMNARVADYCLHRLMTQAGTIEQILDAGVLGYRAPELAASKKPMPSFKSDVYAFGVILLELLTGRCAGDVVSGDEGGVDLTDWLRLRVAEGRGSECFDSTLMSEMGNPVVEKGMKEVLGIAIRCIRSVSERPGIKTIYEDLSSI 1063
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi41g00038 1063 ProSiteProfiles Leucine-rich repeat profile. 291 313 IPR001611 GO:0005515
Vivi41g00038 1063 FunFam Leucine-rich repeat receptor-like protein kinase 766 858 - -
Vivi41g00038 1063 Pfam Leucine Rich repeat 290 305 IPR001611 GO:0005515
Vivi41g00038 1063 SUPERFAMILY L domain-like 43 378 - -
Vivi41g00038 1063 MobiDBLite consensus disorder prediction 670 691 - -
Vivi41g00038 1063 Gene3D Phosphorylase Kinase; domain 1 772 858 - -
Vivi41g00038 1063 PANTHER OS07G0626500 PROTEIN 7 1063 - -
Vivi41g00038 1063 SUPERFAMILY Protein kinase-like (PK-like) 784 1060 IPR011009 -
Vivi41g00038 1063 Gene3D Ribonuclease Inhibitor 21 185 IPR032675 -
Vivi41g00038 1063 FunFam LRR receptor-like serine/threonine-protein kinase GHR1 20 263 - -
Vivi41g00038 1063 Pfam Leucine rich repeat 502 562 IPR001611 GO:0005515
Vivi41g00038 1063 Pfam Leucine rich repeat 143 201 IPR001611 GO:0005515
Vivi41g00038 1063 Pfam Leucine rich repeat N-terminal domain 22 67 IPR013210 -
Vivi41g00038 1063 ProSiteProfiles Leucine-rich repeat profile. 503 524 IPR001611 GO:0005515
Vivi41g00038 1063 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 380 612 - -
Vivi41g00038 1063 SMART LRR_typ_2 502 524 IPR003591 -
Vivi41g00038 1063 SMART LRR_typ_2 289 311 IPR003591 -
Vivi41g00038 1063 SMART LRR_typ_2 312 336 IPR003591 -
Vivi41g00038 1063 SMART LRR_typ_2 525 549 IPR003591 -
Vivi41g00038 1063 SMART LRR_typ_2 165 188 IPR003591 -
Vivi41g00038 1063 SMART LRR_typ_2 117 141 IPR003591 -
Vivi41g00038 1063 SMART LRR_typ_2 189 212 IPR003591 -
Vivi41g00038 1063 Gene3D Transferase(Phosphotransferase) domain 1 860 1063 - -
Vivi41g00038 1063 Gene3D Ribonuclease Inhibitor 264 620 IPR032675 -
Vivi41g00038 1063 FunFam Pollen receptor-like kinase 1 859 1063 - -
Vivi41g00038 1063 Gene3D Ribonuclease Inhibitor 188 262 IPR032675 -
Vivi41g00038 1063 Pfam Protein tyrosine and serine/threonine kinase 785 982 IPR001245 GO:0004672|GO:0006468
Vivi41g00038 1063 ProSiteProfiles Protein kinase domain profile. 781 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi41g00038 1063 SUPERFAMILY RNI-like 343 594 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi41g00038 1 1051 Receptor kinase-like Gene Family AT1G55610 27.654 9.59e-80 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi41g00038 PK_Tyr_Ser-Thr 1.5e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi41g00038 - - gmx:100793639 1734.15