Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi41g00023 ATGGATAGTGGTGGTAAATCAGCGGTTTCACAAAATTGTTTCTCTTTCATTGGGCTTCTGATTTCTTCGTCTTCTCTCTCTTTCAAAGAAAGAGTGTTTGTGCCGATTACGAAGCCTTATGTATCATTTATTGGTAGAAGAAATCTAACTGCAGGTCCTGTAATTACTTGGAAGAGTAAATCTTCGGACAGAGGCCCAAATGGTAGACATTGGGAACCTACGGTTCAGCCGTTTGAGTCAGGTTTTTTGTGTGCAACTGGTGTCACTTTTAAGAATACGGCGATTGCATCGGCAAGTGGAAAAGGAATGCAGGCAGTGGCACTAAGAGTAGACAGTGATTATGCAATGTTCCATAGAGTTAATCTTAGAGGAACACAAGACACTACTATAGACAACACGGGAACTCACTATTTATACCAGTGTCTCTTCGAAGGAAAAGTTGATTTCATCTTTGGCAGTGCAATTTCACTCTCCTGTTTTCTTCTTACAGCCAGCTGA 498 0.4116 MDSGGKSAVSQNCFSFIGLLISSSSLSFKERVFVPITKPYVSFIGRRNLTAGPVITWKSKSSDRGPNGRHWEPTVQPFESGFLCATGVTFKNTAIASASGKGMQAVALRVDSDYAMFHRVNLRGTQDTTIDNTGTHYLYQCLFEGKVDFIFGSAISLSCFLLTAS 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi41g00023 165 Gene3D - 27 159 IPR012334 -
Vivi41g00023 165 Pfam Pectinesterase 27 156 IPR000070 GO:0030599|GO:0042545
Vivi41g00023 165 SUPERFAMILY Pectin lyase-like 28 156 IPR011050 -
Vivi41g00023 165 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 27 157 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi41g00023 28 157 Carbohydrate Esterase AT5G55590 48.120 1.10e-40 137